FFCP PHASE1:Mm9::chr11:118163721..118163737,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=487|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:118163721..118163737,-|id=chr11:118163721..118163737,-|ontology_enrichment_celltype=CL:0000055!6.34e-10!50;CL:0000221!3.03e-07!44;CL:0000133!3.03e-07!44;CL:0002319!3.06e-07!43|ontology_enrichment_celltype_v019_2=CL:0000221,4.71e-07,44;CL:0000133,4.71e-07,44;CL:0002319,4.79e-07,43;CL:0000333,9.73e-07,10;CL:0000095,9.73e-07,10;CL:0000243,9.73e-07,10;CL:0000123,9.73e-07,10;CL:0000125,9.73e-07,10;CL:0000030,9.73e-07,10;CL:0000339,9.73e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.87e-12!75;UBERON:0001016!7.87e-12!75;UBERON:0001017!2.38e-11!73;UBERON:0005743!2.38e-11!73;UBERON:0004121!4.96e-10!102;UBERON:0000924!4.96e-10!102;UBERON:0006601!4.96e-10!102;UBERON:0001049!4.15e-08!52;UBERON:0005068!4.15e-08!52;UBERON:0006241!4.15e-08!52;UBERON:0007135!4.15e-08!52;UBERON:0000955!9.57e-08!50;UBERON:0006238!9.57e-08!50;UBERON:0002616!1.51e-07!49;UBERON:0002020!1.66e-07!34;UBERON:0000033!2.12e-07!63;UBERON:0002346!6.91e-07!71;UBERON:0003075!6.91e-07!71;UBERON:0007284!6.91e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.40e-11,75;UBERON:0001017,4.31e-11,73;UBERON:0004121,2.64e-10,95;UBERON:0000924,2.64e-10,95;UBERON:0006601,2.64e-10,95;UBERON:0000073,8.29e-09,54;UBERON:0001049,5.68e-08,52;UBERON:0005068,5.68e-08,52;UBERON:0006241,5.68e-08,52;UBERON:0007135,5.68e-08,52;UBERON:0002346,1.21e-07,64;UBERON:0003075,1.21e-07,64;UBERON:0007284,1.21e-07,64;UBERON:0002020,1.66e-07,34;UBERON:0010314,6.40e-07,92;UBERON:0010371,8.91e-07,73|phase1_expression=1.60148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0.437102012094987,0,0.202475267389826,0,0.157731082679119,0,0,2.55129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0.7813353445238,0.523523743973798,2.94115744015507,2.73218193983378,2.91306211818692,69.7468371584698,60.9275356629282,46.8044218012288,13.3006528539167,7.19483016055474,13.8402295122717,24.1093074852111,16.7983705950435,8.62515386189829,0,0.725362142011344,0.672187598284928,8.7468208252222,9.45560351797897,25.7836046138721,0.809265843438391,1.5869729378161,1.26766280701236,7.45457970552091,16.0073063300005,17.997994345628,15.8218618010716,19.1829631035447,18.2756067416227,21.5162250980071,1.03689612308478,0.945041568321835,1.05162480675691,3.42781181284564,5.74258206474195,1.10241719293459,1.24599112323707,1.83843757322004,6.60695285996332,3.31987079021488,7.52672012955593,1.18697658957174,4.20843160571084,2.6045668527838,7.53794097303729,9.00420176050688,7.18151764551008,8.54422897873636,8.25755748634797,1.4911955666024,3.18050011999373,2.87171928405785,2.02905142091174,0.860423876981386,0,0,0,0,2.38755514223978,14.3161470965569,15.0675882669664,10.2468476607999,1.97180787687353,2.56652954828636,0,0,3.89683873820185,4.81383744402687,4.04419556011827,0.5709193985953,0.517875767294343,2.22663208597237,0.867426633830679,0.913396434936424,1.38369298353635,1.80867168663147,1.76383060703557,0.251333182659351,1.97755974187499,2.4581890676385,1.76922110389975,3.88240439873782,1.98757366614354,3.87900202508178,0,0.878342391034642,0.83778682725382,0.255457055208591,0.11981512450592,0,0,6.14141621559773,5.03250663100489,1.50785222535437,4.34560800480691,2.55715457330331,8.10373373782284,2.92034273521964,5.90668310331835,3.35898820647251,0.505445516867349,1.26265113531884,1.04096354370163,1.83921683546778,1.26043490863744,2.10986744970001,1.76894897793452,3.20284300712124,0.937017245597288,3.62184719034622,0.862271971731369,1.32374256117473,1.58356011747554,2.6303487891309,5.00485048606076,3.48252166522167,4.11564272815887,2.38841120182192,0,0,0,0.828503090142008,2.11073453982987,0.900310307305074,1.42046841351126,1.37734962223183,2.93107514486019,2.55787339225449,1.87791380979733,1.05088808130453,1.81015834904829,2.62667942526552,1.4592385718254,1.90059983652932,1.75640092232841,1.34206418760372,3.78521907415429,4.11618449517138,0.660837565967596,0.264450566663544,1.06644125267617,1.62565670302307,0.515469845288373,0.605050573870028,1.77902435075896,1.14135375667535,0.949058123089023,1.4822905925161,1.25667604400135,0.596869416123452,0.58489226135736,1.79763881730844,1.29682829924817,0.995706366271836,1.51734320762465,2.85621281524322,3.38123207019241,2.44381593414377,2.32742984601151,0.98190147846446,2.08680572510049,0.590440591918409,0.784993639206874,1.1105744752962,0.296452627087149,0,0.393117990226406,0,0.202860121388503,0,0.763877555344259,0.575392274901621,0.324270453550071,0.823684239564244,17.2521847832825,0.744281895337007,0.936113019343682,0.252578877947112,0.179397413521912,0,7.02062122633098,0.757965647081939,1.30371981153621,0.848725428875941,3.28566347603903,1.34005005953453,1.42826184531608,0.780534591431195,2.67979744980525,6.64394068946325,5.74037167166954,7.70157579163969,6.21665934717224,7.23245292907558,13.5712155545345,3.26343410291226,0.9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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=487 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:118163721..118163737,- | |||
|description=CAGE_peak_at_chr11:118163721..118163737,- | |||
|id=chr11:118163721..118163737,- | |||
|ontology_enrichment_celltype=CL:0000055!6.34e-10!50;CL:0000221!3.03e-07!44;CL:0000133!3.03e-07!44;CL:0002319!3.06e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.71e-07,44;CL:0000133,4.71e-07,44;CL:0002319,4.79e-07,43;CL:0000333,9.73e-07,10;CL:0000095,9.73e-07,10;CL:0000243,9.73e-07,10;CL:0000123,9.73e-07,10;CL:0000125,9.73e-07,10;CL:0000030,9.73e-07,10;CL:0000339,9.73e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.87e-12!75;UBERON:0001016!7.87e-12!75;UBERON:0001017!2.38e-11!73;UBERON:0005743!2.38e-11!73;UBERON:0004121!4.96e-10!102;UBERON:0000924!4.96e-10!102;UBERON:0006601!4.96e-10!102;UBERON:0001049!4.15e-08!52;UBERON:0005068!4.15e-08!52;UBERON:0006241!4.15e-08!52;UBERON:0007135!4.15e-08!52;UBERON:0000955!9.57e-08!50;UBERON:0006238!9.57e-08!50;UBERON:0002616!1.51e-07!49;UBERON:0002020!1.66e-07!34;UBERON:0000033!2.12e-07!63;UBERON:0002346!6.91e-07!71;UBERON:0003075!6.91e-07!71;UBERON:0007284!6.91e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.40e-11,75;UBERON:0001017,4.31e-11,73;UBERON:0004121,2.64e-10,95;UBERON:0000924,2.64e-10,95;UBERON:0006601,2.64e-10,95;UBERON:0000073,8.29e-09,54;UBERON:0001049,5.68e-08,52;UBERON:0005068,5.68e-08,52;UBERON:0006241,5.68e-08,52;UBERON:0007135,5.68e-08,52;UBERON:0002346,1.21e-07,64;UBERON:0003075,1.21e-07,64;UBERON:0007284,1.21e-07,64;UBERON:0002020,1.66e-07,34;UBERON:0010314,6.40e-07,92;UBERON:0010371,8.91e-07,73 | |||
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| |||
|short_description=p@chr11:118163721..118163737,- | |||
}} |
Latest revision as of 13:31, 5 August 2015
Short description: | p@chr11:118163721..118163737, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:118163721..118163737, - |
Coexpression cluster: | MCL_coexpression_mm9:487 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.71e-07 | 44 |
neurectodermal cell | 4.71e-07 | 44 |
neural cell | 4.79e-07 | 43 |
migratory neural crest cell | 9.73e-07 | 10 |
neuron associated cell | 9.73e-07 | 10 |
glial cell (sensu Vertebrata) | 9.73e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 9.73e-07 | 10 |
glial cell | 9.73e-07 | 10 |
glioblast | 9.73e-07 | 10 |
glioblast (sensu Vertebrata) | 9.73e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.40e-11 | 75 |
central nervous system | 4.31e-11 | 73 |
ectoderm-derived structure | 2.64e-10 | 95 |
ectoderm | 2.64e-10 | 95 |
presumptive ectoderm | 2.64e-10 | 95 |
regional part of nervous system | 8.29e-09 | 54 |
neural tube | 5.68e-08 | 52 |
neural rod | 5.68e-08 | 52 |
future spinal cord | 5.68e-08 | 52 |
neural keel | 5.68e-08 | 52 |
neurectoderm | 1.21e-07 | 64 |
neural plate | 1.21e-07 | 64 |
presumptive neural plate | 1.21e-07 | 64 |
gray matter | 1.66e-07 | 34 |
structure with developmental contribution from neural crest | 6.40e-07 | 92 |
ecto-epithelium | 8.91e-07 | 73 |