FFCP PHASE1:Mm9::chr11:49526124..49526133,-: Difference between revisions
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{{FFCP|EntrezGene=104625|HGNC=|UniProt=Q8K3P5|association_with_transcript=78bp_to_ENSMUST00000020624,NM_212484,uc007irb.1_5end|description=CAGE_peak_3_at_Cnot6_5end|id=chr11:49526124..49526133,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!1.69e-07!41;UBERON:0001004!7.89e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.28e-09,41;UBERON:0001004,3.28e-09,42;UBERON:0002370,2.90e-08,23;UBERON:0000974,2.90e-08,23;UBERON:0004807,2.90e-08,23;UBERON:0005058,2.90e-08,23;UBERON:0003351,2.90e-08,23;UBERON:0009113,2.90e-08,23;UBERON:0003295,2.90e-08,23;UBERON:0009722,2.90e-08,23;UBERON:0005562,2.90e-08,23;UBERON:0007690,2.90e-08,23;UBERON:0006562,1.01e-07,24;UBERON:0003408,1.01e-07,24;UBERON:0001557,1.01e-07,24;UBERON:0001042,1.01e-07,24;UBERON:0008814,1.01e-07,24;UBERON:0009145,1.01e-07,24|phase1_expression=0.80074423552397,0.697950815278722,1.81999695755814,0.60492842261366,0,1.6787927191189,0.700837921786577,1.03298658753261,2.25261955442667,2.34064526321993,0.68487187290202,0.478632953972018,0.684802919724823,1.22388563386596,0.333109761815663,0.607425802169478,0.699561878128147,0.946386496074713,0.685572168028694,2.54633791078818,0.425216450755349,0.496454756004426,0,0.319984845586813,0.45881856213434,1.14846392823004,0,1.07735616342945,1.33016393619462,0.504060259519861,0,0,0.61506478758457,0,0.577703239502549,0.664938581433969,0.612508068787107,1.25559489221072,0,0.523523743973798,0.588231488031014,0,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,0,1.67782606057736,2.90144856804538,2.35265659399725,1.02903774414379,0.573066879877513,1.03134418455488,0.809265843438391,0.528990979272033,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.207379224616955,1.08004750665353,0.841299845405528,0,0.883474163806454,0.61245399607477,0.766763768145891,0,0,1.14918604276669,0.153606533256243,0.659431438650969,0.823388792421687,1.56274011167028,0.279182999001381,0.56276261003168,0.916789486660861,0.883885756421003,0.711858403995515,0.745597783301202,0.151452386666368,0.453429360640713,0.869593466105033,0,0,0,0.649776417447669,0,0.561777680527007,0.511290967734173,0,0.35333957451034,0.563373679106722,0,2.54805239706646,7.11066703153331,0.216491041011214,0.253359865475099,0,0.45673551887624,1.29468941823586,0.890652834388949,0.867426633830679,0,0.230615497256059,0.301445281105245,0.352766121407114,0.376999773989026,3.21353458054686,0.289198713839823,0,1.7794353494215,0.883366073841574,0.484875253135222,0,0.292780797011547,0.83778682725382,0.510914110417183,0,0.599902730993408,0.254140454146129,0.898743836428936,0.457500602818626,1.50785222535437,0.347648640384553,0.511430914660661,0.20778804455956,0.486723789203273,1.01839363850316,0.124406970610093,0,0.841767423545896,0.910843100738926,0.919608417733892,0.540186389416048,1.20563854268572,1.15662048557257,0.512454881139399,1.3118241438362,2.32833033665114,0.431135985865684,1.32374256117473,0.527853372491847,0.876782929710299,1.39023624612799,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0.284163499395593,0.621377317606506,0.234526059981096,0.180062061461015,0.946978942340841,0.983821158737019,0.308534225774757,0.465067889500816,0.804820204198858,0.467061369468678,0.658239399653922,0.820837320395476,1.05389452409612,0.877199924551994,0.658650345873152,0.402619256281115,0.630869845692382,1.9551876352064,0.330418782983798,0.528901133327089,1.06644125267617,0.464473343720877,0.77320476793256,1.00841762311671,0.444756087689741,0.380451252225118,1.42358718463353,0.823494773620054,0.754005626400808,0.994782360205754,0.974820435595601,0.898819408654221,0.432276099749388,0.796565093017469,1.89667900953082,0.685491075658373,0,1.01825663922657,0.581857461502877,0.911765658574141,2.21327879934901,1.47610147979602,0.941992367048249,0.863780147452604,0.296452627087149,0.500535317148282,0.393117990226406,0.899448449539415,0,0.964708639009667,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,1.43768206527355,1.11642284300551,1.87222603868736,0.505157755894224,0.358794827043824,0.482443521363367,2.21703828199926,1.51593129416388,1.14075483509418,1.01847051465113,0.938760993154008,1.34005005953453,0.714130922658041,4.09780660501378,2.20689201748667,2.43611158613652,0.956728611944923,0.81931657357869,0.518054945597687,1.3018415272336,0,0,0,1.10374698521893,0.642202359951168,0.234423373184406,0.491804836130026,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0.566153061577665,0.404810701674894,0,0.395287777946524,0.321321316421807,1.13552068166615,0.712262414669021,0.977321756121456,0.824850614862677,1.32745138339963,1.21390318077491,0.604647113929502,0.943025398779491,0.885905678642318,0.614870295887855,2.32585463851399,1.81766864738753,1.78248689192361,1.58018378967908,0,2.06271086496374,0.34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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:104625 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K3P5 | |||
|association_with_transcript=78bp_to_ENSMUST00000020624,NM_212484,uc007irb.1_5end | |||
|cluster_id=chr11:49526124..49526133,- | |||
|description=CAGE_peak_3_at_Cnot6_5end | |||
|id=chr11:49526124..49526133,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.69e-07!41;UBERON:0001004!7.89e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.28e-09,41;UBERON:0001004,3.28e-09,42;UBERON:0002370,2.90e-08,23;UBERON:0000974,2.90e-08,23;UBERON:0004807,2.90e-08,23;UBERON:0005058,2.90e-08,23;UBERON:0003351,2.90e-08,23;UBERON:0009113,2.90e-08,23;UBERON:0003295,2.90e-08,23;UBERON:0009722,2.90e-08,23;UBERON:0005562,2.90e-08,23;UBERON:0007690,2.90e-08,23;UBERON:0006562,1.01e-07,24;UBERON:0003408,1.01e-07,24;UBERON:0001557,1.01e-07,24;UBERON:0001042,1.01e-07,24;UBERON:0008814,1.01e-07,24;UBERON:0009145,1.01e-07,24 | |||
|phase1_expression=0.80074423552397,0.697950815278722,1.81999695755814,0.60492842261366,0,1.6787927191189,0.700837921786577,1.03298658753261,2.25261955442667,2.34064526321993,0.68487187290202,0.478632953972018,0.684802919724823,1.22388563386596,0.333109761815663,0.607425802169478,0.699561878128147,0.946386496074713,0.685572168028694,2.54633791078818,0.425216450755349,0.496454756004426,0,0.319984845586813,0.45881856213434,1.14846392823004,0,1.07735616342945,1.33016393619462,0.504060259519861,0,0,0.61506478758457,0,0.577703239502549,0.664938581433969,0.612508068787107,1.25559489221072,0,0.523523743973798,0.588231488031014,0,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,0,1.67782606057736,2.90144856804538,2.35265659399725,1.02903774414379,0.573066879877513,1.03134418455488,0.809265843438391,0.528990979272033,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.207379224616955,1.08004750665353,0.841299845405528,0,0.883474163806454,0.61245399607477,0.766763768145891,0,0,1.14918604276669,0.153606533256243,0.659431438650969,0.823388792421687,1.56274011167028,0.279182999001381,0.56276261003168,0.916789486660861,0.883885756421003,0.711858403995515,0.745597783301202,0.151452386666368,0.453429360640713,0.869593466105033,0,0,0,0.649776417447669,0,0.561777680527007,0.511290967734173,0,0.35333957451034,0.563373679106722,0,2.54805239706646,7.11066703153331,0.216491041011214,0.253359865475099,0,0.45673551887624,1.29468941823586,0.890652834388949,0.867426633830679,0,0.230615497256059,0.301445281105245,0.352766121407114,0.376999773989026,3.21353458054686,0.289198713839823,0,1.7794353494215,0.883366073841574,0.484875253135222,0,0.292780797011547,0.83778682725382,0.510914110417183,0,0.599902730993408,0.254140454146129,0.898743836428936,0.457500602818626,1.50785222535437,0.347648640384553,0.511430914660661,0.20778804455956,0.486723789203273,1.01839363850316,0.124406970610093,0,0.841767423545896,0.910843100738926,0.919608417733892,0.540186389416048,1.20563854268572,1.15662048557257,0.512454881139399,1.3118241438362,2.32833033665114,0.431135985865684,1.32374256117473,0.527853372491847,0.876782929710299,1.39023624612799,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0.284163499395593,0.621377317606506,0.234526059981096,0.180062061461015,0.946978942340841,0.983821158737019,0.308534225774757,0.465067889500816,0.804820204198858,0.467061369468678,0.658239399653922,0.820837320395476,1.05389452409612,0.877199924551994,0.658650345873152,0.402619256281115,0.630869845692382,1.9551876352064,0.330418782983798,0.528901133327089,1.06644125267617,0.464473343720877,0.77320476793256,1.00841762311671,0.444756087689741,0.380451252225118,1.42358718463353,0.823494773620054,0.754005626400808,0.994782360205754,0.974820435595601,0.898819408654221,0.432276099749388,0.796565093017469,1.89667900953082,0.685491075658373,0,1.01825663922657,0.581857461502877,0.911765658574141,2.21327879934901,1.47610147979602,0.941992367048249,0.863780147452604,0.296452627087149,0.500535317148282,0.393117990226406,0.899448449539415,0,0.964708639009667,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,1.43768206527355,1.11642284300551,1.87222603868736,0.505157755894224,0.358794827043824,0.482443521363367,2.21703828199926,1.51593129416388,1.14075483509418,1.01847051465113,0.938760993154008,1.34005005953453,0.714130922658041,4.09780660501378,2.20689201748667,2.43611158613652,0.956728611944923,0.81931657357869,0.518054945597687,1.3018415272336,0,0,0,1.10374698521893,0.642202359951168,0.234423373184406,0.491804836130026,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0.566153061577665,0.404810701674894,0,0.395287777946524,0.321321316421807,1.13552068166615,0.712262414669021,0.977321756121456,0.824850614862677,1.32745138339963,1.21390318077491,0.604647113929502,0.943025398779491,0.885905678642318,0.614870295887855,2.32585463851399,1.81766864738753,1.78248689192361,1.58018378967908,0,2.06271086496374,0.340439605753788,1.44048875225048,1.03486947026204,1.50035924522115,1.41872186913819,0.535106452806212,0.987294123612726,0.608929898229199,1.40803024838226,0.21183207086382,1.32317038832977,0.8244312647074,0.484393280087717,0.904693873922338,0.596861720015682,0.984845398470368,0.291480836629851,0.556275906031529,0.512612642393558,0,0.740778109478847,0.188368457004691,0.683471138605126,0.228778173206523,1.5298058699447,0.559805809294632,1.52019971184866,0,0.949007980743406,2.03319467126849,0.972048067396211,1.04544148007234,0.436725127492355,1.07891477107857,0.578574190077352,3.66458318777641,0.648074866458964,0,0,0.747582730219894,0.66183396182839,0.777804753376191,0.774958940866387,1.01373675294467,0.704143431874524,1.17183946359555,0.524296722128554,0.241584120826006,0.864090018773596,1.58005560314089,0.608175645870493,0.821687657318618,0.649604114888975,1.61124026100733,1.98681354781265,1.08175904567972,0.88613716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| |||
|short_description=p3@Cnot6 | |||
}} |
Revision as of 23:51, 5 August 2015
Short description: | p3@Cnot6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cnot6_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_ENSMUST00000020624, NM_212484, uc007irb.1_5end |
EntrezGene: | 104625 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.28e-09 | 41 |
respiratory system | 3.28e-09 | 42 |
thymus | 2.90e-08 | 23 |
neck | 2.90e-08 | 23 |
respiratory system epithelium | 2.90e-08 | 23 |
hemolymphoid system gland | 2.90e-08 | 23 |
pharyngeal epithelium | 2.90e-08 | 23 |
thymic region | 2.90e-08 | 23 |
pharyngeal gland | 2.90e-08 | 23 |
entire pharyngeal arch endoderm | 2.90e-08 | 23 |
thymus primordium | 2.90e-08 | 23 |
early pharyngeal endoderm | 2.90e-08 | 23 |
pharynx | 1.01e-07 | 24 |
gland of gut | 1.01e-07 | 24 |
upper respiratory tract | 1.01e-07 | 24 |
chordate pharynx | 1.01e-07 | 24 |
pharyngeal arch system | 1.01e-07 | 24 |
pharyngeal region of foregut | 1.01e-07 | 24 |