FFCP PHASE1:Mm9::chr11:62352525..62352534,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=73139|HGNC=|MCL_coexpression_id=0|UniProt=F6SS03|association_with_transcript=-20bp_to_ENSMUST00000123181,ENSMUST00000138772_5end|description=CAGE_peak_6_at_Cenpv_5end|id=chr11:62352525..62352534,-|ontology_enrichment_celltype=CL:0002563!5.00e-09!9;CL:0002251!5.00e-09!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.43e-32,9;CL:0002251,2.43e-32,9;CL:0000066,6.53e-21,25;CL:0000239,7.62e-20,6;CL:0000677,7.62e-20,6;CL:0000584,7.62e-20,6;CL:0002076,4.72e-19,15;CL:0000223,1.24e-17,20;CL:0000075,5.34e-17,7;CL:0002250,3.16e-14,3;CL:0000682,3.37e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.08e-12!15;UBERON:0001242!1.38e-11!13;UBERON:0000060!1.38e-11!13;UBERON:0001262!1.38e-11!13;UBERON:0004786!1.38e-11!13;UBERON:0000160!1.15e-09!43;UBERON:0003350!5.00e-09!9;UBERON:0004808!5.00e-09!9;UBERON:0001277!5.00e-09!9;UBERON:0005409!7.96e-09!59;UBERON:0004923!9.03e-09!24;UBERON:0000473!3.35e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.01e-34,13;UBERON:0001262,2.01e-34,13;UBERON:0004786,2.01e-34,13;UBERON:0003350,2.43e-32,9;UBERON:0004808,2.43e-32,9;UBERON:0001277,2.43e-32,9;UBERON:0000344,1.17e-29,15;UBERON:0000485,2.63e-26,11;UBERON:0000160,9.88e-20,31;UBERON:0004923,5.03e-18,24;UBERON:0005409,2.14e-12,47|phase1_expression=0,2.09385244583617,2.27499619694768,2.41971369045464,1.50268718983904,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.61582251287033,0.198581902401771,0.783599367416806,0.47997726838022,0.45881856213434,1.14846392823004,4.30761996159075,0.861884930743556,1.14014051673824,0.756090389279792,0.221730510655305,0,0,0,1.44425809875637,1.32987716286794,1.22501613757421,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.270011876663381,0.420649922702764,0,0,0.61245399607477,0.479227355091182,0,0,0,0,0.263772575460388,0,0.52091337055676,0,0,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0,0,0,0,1.07940638327563,0,0.448026887097336,0.702222100658759,0,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,1.02182822083437,0.239630249011841,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0,0,0.420883711772948,0.260240885925407,0.459804208866946,0,0,0.136072998302656,0.2562274405697,0.374806898238915,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,1.65209391491899,0.528901133327089,0.426576501070468,0.232236671860439,0,0,0.444756087689741,0.380451252225118,0.949058123089023,0.494096864172033,0.502670417600539,0.198956472041151,0,0,0.648414149624083,1.59313018603494,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0,0.482443521363367,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0,0,0.565105371014073,0.410082683163076,0,0.169978429993855,0,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0,23.1114104860518,0.149516546043979,0.330916980914195,0.194451188344048,0.645799117388655,0.168956125490778,0.821500670520278,0.911430693907651,0.629156066554265,7.24752362478018,10.657110231541,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0.167884616364078,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.62272408550506,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p6@Cenpv}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:73139 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6SS03 | |||
|association_with_transcript=-20bp_to_ENSMUST00000123181,ENSMUST00000138772_5end | |||
|cluster_id=chr11:62352525..62352534,- | |||
|description=CAGE_peak_6_at_Cenpv_5end | |||
|id=chr11:62352525..62352534,- | |||
|ontology_enrichment_celltype=CL:0002563!5.00e-09!9;CL:0002251!5.00e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.43e-32,9;CL:0002251,2.43e-32,9;CL:0000066,6.53e-21,25;CL:0000239,7.62e-20,6;CL:0000677,7.62e-20,6;CL:0000584,7.62e-20,6;CL:0002076,4.72e-19,15;CL:0000223,1.24e-17,20;CL:0000075,5.34e-17,7;CL:0002250,3.16e-14,3;CL:0000682,3.37e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.08e-12!15;UBERON:0001242!1.38e-11!13;UBERON:0000060!1.38e-11!13;UBERON:0001262!1.38e-11!13;UBERON:0004786!1.38e-11!13;UBERON:0000160!1.15e-09!43;UBERON:0003350!5.00e-09!9;UBERON:0004808!5.00e-09!9;UBERON:0001277!5.00e-09!9;UBERON:0005409!7.96e-09!59;UBERON:0004923!9.03e-09!24;UBERON:0000473!3.35e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.01e-34,13;UBERON:0001262,2.01e-34,13;UBERON:0004786,2.01e-34,13;UBERON:0003350,2.43e-32,9;UBERON:0004808,2.43e-32,9;UBERON:0001277,2.43e-32,9;UBERON:0000344,1.17e-29,15;UBERON:0000485,2.63e-26,11;UBERON:0000160,9.88e-20,31;UBERON:0004923,5.03e-18,24;UBERON:0005409,2.14e-12,47 | |||
|phase1_expression=0,2.09385244583617,2.27499619694768,2.41971369045464,1.50268718983904,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.61582251287033,0.198581902401771,0.783599367416806,0.47997726838022,0.45881856213434,1.14846392823004,4.30761996159075,0.861884930743556,1.14014051673824,0.756090389279792,0.221730510655305,0,0,0,1.44425809875637,1.32987716286794,1.22501613757421,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.270011876663381,0.420649922702764,0,0,0.61245399607477,0.479227355091182,0,0,0,0,0.263772575460388,0,0.52091337055676,0,0,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0,0,0,0,1.07940638327563,0,0.448026887097336,0.702222100658759,0,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,1.02182822083437,0.239630249011841,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0,0,0.420883711772948,0.260240885925407,0.459804208866946,0,0,0.136072998302656,0.2562274405697,0.374806898238915,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,1.65209391491899,0.528901133327089,0.426576501070468,0.232236671860439,0,0,0.444756087689741,0.380451252225118,0.949058123089023,0.494096864172033,0.502670417600539,0.198956472041151,0,0,0.648414149624083,1.59313018603494,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0,0.482443521363367,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0,0,0.565105371014073,0.410082683163076,0,0.169978429993855,0,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0,23.1114104860518,0.149516546043979,0.330916980914195,0.194451188344048,0.645799117388655,0.168956125490778,0.821500670520278,0.911430693907651,0.629156066554265,7.24752362478018,10.657110231541,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0.167884616364078,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.62272408550506,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Cenpv | |||
}} |
Revision as of 06:40, 6 August 2015
Short description: | p6@Cenpv |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cenpv_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -20bp_to_ENSMUST00000123181, ENSMUST00000138772_5end |
EntrezGene: | 73139 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.43e-32 | 9 |
epithelial cell of alimentary canal | 2.43e-32 | 9 |
epithelial cell | 6.53e-21 | 25 |
brush border epithelial cell | 7.62e-20 | 6 |
gut absorptive cell | 7.62e-20 | 6 |
enterocyte | 7.62e-20 | 6 |
endo-epithelial cell | 4.72e-19 | 15 |
endodermal cell | 1.24e-17 | 20 |
columnar/cuboidal epithelial cell | 5.34e-17 | 7 |
intestinal crypt stem cell | 3.16e-14 | 3 |
M cell of gut | 3.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.01e-34 | 13 |
wall of intestine | 2.01e-34 | 13 |
gastrointestinal system mucosa | 2.01e-34 | 13 |
epithelium of mucosa | 2.43e-32 | 9 |
gastrointestinal system epithelium | 2.43e-32 | 9 |
intestinal epithelium | 2.43e-32 | 9 |
mucosa | 1.17e-29 | 15 |
simple columnar epithelium | 2.63e-26 | 11 |
intestine | 9.88e-20 | 31 |
organ component layer | 5.03e-18 | 24 |
gastrointestinal system | 2.14e-12 | 47 |