FFCP PHASE1:Mm9::chr11:69779364..69779402,+: Difference between revisions
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{{FFCP|EntrezGene=53624|HGNC=|MCL_coexpression_id=1985|UniProt=Q9Z261|association_with_transcript=441bp_to_NM_016887,uc007jtb.2_5end|description=CAGE_peak_6_at_Cldn7_5end|id=chr11:69779364..69779402,+|ontology_enrichment_celltype=CL:0000066!4.68e-09!25;CL:0002563!1.42e-08!9;CL:0002251!1.42e-08!9;CL:0002076!3.02e-08!15|ontology_enrichment_celltype_v019_2=CL:0002076,1.88e-18,15;CL:0002563,2.88e-17,9;CL:0002251,2.88e-17,9;CL:0000066,1.81e-16,25;CL:0000223,3.90e-13,20;CL:0000239,1.58e-12,6;CL:0000677,1.58e-12,6;CL:0000584,1.58e-12,6;CL:0000075,1.26e-10,7;CL:0000068,4.45e-08,3;CL:0002202,4.45e-08,3;CL:0000069,4.45e-08,3;CL:0002632,4.45e-08,3;CL:0002368,4.45e-08,3;CL:0000307,4.45e-08,3;CL:0000377,4.45e-08,3;CL:0000682,1.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.19e-25!43;UBERON:0005409!2.59e-22!59;UBERON:0000344!4.38e-14!15;UBERON:0001242!2.81e-12!13;UBERON:0000060!2.81e-12!13;UBERON:0001262!2.81e-12!13;UBERON:0004786!2.81e-12!13;UBERON:0004119!3.69e-12!130;UBERON:0000925!3.69e-12!130;UBERON:0006595!3.69e-12!130;UBERON:0001007!4.15e-12!128;UBERON:0001555!4.15e-12!128;UBERON:0007026!4.15e-12!128;UBERON:0004921!6.05e-11!126;UBERON:0004185!6.05e-11!126;UBERON:0004923!1.49e-09!24;UBERON:0000485!4.21e-09!11;UBERON:0003350!1.42e-08!9;UBERON:0004808!1.42e-08!9;UBERON:0001277!1.42e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.41e-41,31;UBERON:0000344,1.22e-29,15;UBERON:0005409,3.12e-29,47;UBERON:0001242,1.43e-25,13;UBERON:0001262,1.43e-25,13;UBERON:0004786,1.43e-25,13;UBERON:0004923,1.87e-19,24;UBERON:0003350,2.88e-17,9;UBERON:0004808,2.88e-17,9;UBERON:0001277,2.88e-17,9;UBERON:0000485,8.33e-14,11;UBERON:0001007,6.04e-13,116;UBERON:0001555,6.04e-13,116;UBERON:0007026,6.04e-13,116;UBERON:0004119,1.36e-12,118;UBERON:0000925,1.36e-12,118;UBERON:0006595,1.36e-12,118;UBERON:0004921,4.44e-11,114;UBERON:0002108,5.57e-10,4;UBERON:0000331,3.26e-08,3;UBERON:0002116,3.26e-08,3;UBERON:0001204,3.26e-08,3;UBERON:0001168,3.26e-08,3;UBERON:0003126,4.45e-08,3;UBERON:0001005,4.45e-08,3;UBERON:0007196,4.45e-08,3;UBERON:0001558,4.45e-08,3|phase1_expression=0.320297694209588,3.14077866875425,6.3699893514535,1.81478526784098,4.50806156951712,4.70061961353291,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,4.63978026100879,9.40578052375397,9.76194338995534,4.73838195774982,6.89507944594845,24.7030445293286,13.6096270070363,13.9690221712842,0,0,0,2.59966457776147,1.66234645358492,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,14.5048997477513,13.1747130047051,9.60496445528088,0.91347103775248,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,9.31958806090611,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0.631325567659422,0.130120442962704,0,0,0,0,0,0,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,2.31293148088659,1.32225283331772,0.426576501070468,0.696710015581316,0.644337306610467,0.605050573870028,2.2237804384487,0.760902504450237,5.21981967698963,2.79988223030818,4.02136334080431,3.78017296878187,3.70431765526328,8.98819408654222,4.32276099749388,2.98711909881551,0.569003702859245,0.685491075658373,1.1270773567308,1.01825663922657,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0,0.390267295715598,0.157635144106191,0.44292937929755,0,0.491589944147214,0.690739927463582,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0.329940245945071,0,1.69946445308487,1.81394134178851,0.565815239267694,0,0,1.03371317267288,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0.36012218806262,0.517434735131018,0.428674070063185,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0,0,0,0,3.78925087618806,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.86404272657441,0.418176592028937,1.09181281873089,0.134864346384821,0.165306911450672,0,2.85152941241944,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0.887943813496259,0.179427713218951,0.335769232728157,0,0.375364950902364,0.549454872801795,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0,0.192075457214608,0.17230640686684,0,0,0.38581844092741,0,0.147198920134397,0,0,0,0,0.188218760830661,0.338458431566706,0.73171189149109,0,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p6@Cldn7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:53624 | |||
|HGNC= | |||
|MCL_coexpression_id=1985 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z261 | |||
|association_with_transcript=441bp_to_NM_016887,uc007jtb.2_5end | |||
|cluster_id=chr11:69779364..69779402,+ | |||
|description=CAGE_peak_6_at_Cldn7_5end | |||
|id=chr11:69779364..69779402,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.68e-09!25;CL:0002563!1.42e-08!9;CL:0002251!1.42e-08!9;CL:0002076!3.02e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.88e-18,15;CL:0002563,2.88e-17,9;CL:0002251,2.88e-17,9;CL:0000066,1.81e-16,25;CL:0000223,3.90e-13,20;CL:0000239,1.58e-12,6;CL:0000677,1.58e-12,6;CL:0000584,1.58e-12,6;CL:0000075,1.26e-10,7;CL:0000068,4.45e-08,3;CL:0002202,4.45e-08,3;CL:0000069,4.45e-08,3;CL:0002632,4.45e-08,3;CL:0002368,4.45e-08,3;CL:0000307,4.45e-08,3;CL:0000377,4.45e-08,3;CL:0000682,1.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.19e-25!43;UBERON:0005409!2.59e-22!59;UBERON:0000344!4.38e-14!15;UBERON:0001242!2.81e-12!13;UBERON:0000060!2.81e-12!13;UBERON:0001262!2.81e-12!13;UBERON:0004786!2.81e-12!13;UBERON:0004119!3.69e-12!130;UBERON:0000925!3.69e-12!130;UBERON:0006595!3.69e-12!130;UBERON:0001007!4.15e-12!128;UBERON:0001555!4.15e-12!128;UBERON:0007026!4.15e-12!128;UBERON:0004921!6.05e-11!126;UBERON:0004185!6.05e-11!126;UBERON:0004923!1.49e-09!24;UBERON:0000485!4.21e-09!11;UBERON:0003350!1.42e-08!9;UBERON:0004808!1.42e-08!9;UBERON:0001277!1.42e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.41e-41,31;UBERON:0000344,1.22e-29,15;UBERON:0005409,3.12e-29,47;UBERON:0001242,1.43e-25,13;UBERON:0001262,1.43e-25,13;UBERON:0004786,1.43e-25,13;UBERON:0004923,1.87e-19,24;UBERON:0003350,2.88e-17,9;UBERON:0004808,2.88e-17,9;UBERON:0001277,2.88e-17,9;UBERON:0000485,8.33e-14,11;UBERON:0001007,6.04e-13,116;UBERON:0001555,6.04e-13,116;UBERON:0007026,6.04e-13,116;UBERON:0004119,1.36e-12,118;UBERON:0000925,1.36e-12,118;UBERON:0006595,1.36e-12,118;UBERON:0004921,4.44e-11,114;UBERON:0002108,5.57e-10,4;UBERON:0000331,3.26e-08,3;UBERON:0002116,3.26e-08,3;UBERON:0001204,3.26e-08,3;UBERON:0001168,3.26e-08,3;UBERON:0003126,4.45e-08,3;UBERON:0001005,4.45e-08,3;UBERON:0007196,4.45e-08,3;UBERON:0001558,4.45e-08,3 | |||
|phase1_expression=0.320297694209588,3.14077866875425,6.3699893514535,1.81478526784098,4.50806156951712,4.70061961353291,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,4.63978026100879,9.40578052375397,9.76194338995534,4.73838195774982,6.89507944594845,24.7030445293286,13.6096270070363,13.9690221712842,0,0,0,2.59966457776147,1.66234645358492,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,14.5048997477513,13.1747130047051,9.60496445528088,0.91347103775248,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,9.31958806090611,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0.631325567659422,0.130120442962704,0,0,0,0,0,0,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,2.31293148088659,1.32225283331772,0.426576501070468,0.696710015581316,0.644337306610467,0.605050573870028,2.2237804384487,0.760902504450237,5.21981967698963,2.79988223030818,4.02136334080431,3.78017296878187,3.70431765526328,8.98819408654222,4.32276099749388,2.98711909881551,0.569003702859245,0.685491075658373,1.1270773567308,1.01825663922657,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0,0.390267295715598,0.157635144106191,0.44292937929755,0,0.491589944147214,0.690739927463582,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0.329940245945071,0,1.69946445308487,1.81394134178851,0.565815239267694,0,0,1.03371317267288,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0.36012218806262,0.517434735131018,0.428674070063185,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0,0,0,0,3.78925087618806,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.86404272657441,0.418176592028937,1.09181281873089,0.134864346384821,0.165306911450672,0,2.85152941241944,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0.887943813496259,0.179427713218951,0.335769232728157,0,0.375364950902364,0.549454872801795,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0,0.192075457214608,0.17230640686684,0,0,0.38581844092741,0,0.147198920134397,0,0,0,0,0.188218760830661,0.338458431566706,0.73171189149109,0,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p6@Cldn7 | |||
}} |
Revision as of 20:14, 3 August 2015
Short description: | p6@Cldn7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cldn7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1985 |
Association with transcript: | 441bp_to_NM_016887, uc007jtb.2_5end |
EntrezGene: | 53624 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.88e-18 | 15 |
intestinal epithelial cell | 2.88e-17 | 9 |
epithelial cell of alimentary canal | 2.88e-17 | 9 |
epithelial cell | 1.81e-16 | 25 |
endodermal cell | 3.90e-13 | 20 |
brush border epithelial cell | 1.58e-12 | 6 |
gut absorptive cell | 1.58e-12 | 6 |
enterocyte | 1.58e-12 | 6 |
columnar/cuboidal epithelial cell | 1.26e-10 | 7 |
duct epithelial cell | 4.45e-08 | 3 |
epithelial cell of tracheobronchial tree | 4.45e-08 | 3 |
branched duct epithelial cell | 4.45e-08 | 3 |
epithelial cell of lower respiratory tract | 4.45e-08 | 3 |
respiratory epithelial cell | 4.45e-08 | 3 |
tracheal epithelial cell | 4.45e-08 | 3 |
tracheoblast | 4.45e-08 | 3 |
M cell of gut | 1.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.41e-41 | 31 |
mucosa | 1.22e-29 | 15 |
gastrointestinal system | 3.12e-29 | 47 |
intestinal mucosa | 1.43e-25 | 13 |
wall of intestine | 1.43e-25 | 13 |
gastrointestinal system mucosa | 1.43e-25 | 13 |
organ component layer | 1.87e-19 | 24 |
epithelium of mucosa | 2.88e-17 | 9 |
gastrointestinal system epithelium | 2.88e-17 | 9 |
intestinal epithelium | 2.88e-17 | 9 |
simple columnar epithelium | 8.33e-14 | 11 |
digestive system | 6.04e-13 | 116 |
digestive tract | 6.04e-13 | 116 |
primitive gut | 6.04e-13 | 116 |
endoderm-derived structure | 1.36e-12 | 118 |
endoderm | 1.36e-12 | 118 |
presumptive endoderm | 1.36e-12 | 118 |
subdivision of digestive tract | 4.44e-11 | 114 |
small intestine | 5.57e-10 | 4 |
ileal mucosa | 3.26e-08 | 3 |
ileum | 3.26e-08 | 3 |
mucosa of small intestine | 3.26e-08 | 3 |
wall of small intestine | 3.26e-08 | 3 |
trachea | 4.45e-08 | 3 |
respiratory airway | 4.45e-08 | 3 |
tracheobronchial tree | 4.45e-08 | 3 |
lower respiratory tract | 4.45e-08 | 3 |