FFCP PHASE1:Mm9::chr11:70323747..70323757,+: Difference between revisions
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{{FFCP|EntrezGene=75604|HGNC=|MCL_coexpression_id=191|UniProt=|association_with_transcript=39bp_to_ENSMUST00000141924_5end|description=CAGE_peak_6_at_Tm4sf5_5end|id=chr11:70323747..70323757,+|ontology_enrichment_celltype=CL:0002563!7.06e-13!9;CL:0002251!7.06e-13!9;CL:0000239!5.33e-12!6;CL:0000677!5.33e-12!6;CL:0000212!5.33e-12!6;CL:0000584!5.33e-12!6;CL:0000075!3.78e-10!7;CL:0000066!1.76e-07!25;CL:0000473!2.67e-07!3;CL:0000627!2.67e-07!3;CL:0000682!2.67e-07!3;CL:0002076!4.34e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,2.65e-19,6;CL:0000677,2.65e-19,6;CL:0000584,2.65e-19,6;CL:0000075,1.55e-16,7;CL:0000682,1.72e-15,3;CL:0002563,7.67e-13,9;CL:0002251,7.67e-13,9;CL:0000066,3.11e-11,25;CL:0002076,1.21e-07,15;CL:0000473,6.61e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.09e-26!43;UBERON:0000344!6.33e-24!15;UBERON:0001242!5.57e-20!13;UBERON:0000060!5.57e-20!13;UBERON:0001262!5.57e-20!13;UBERON:0004786!5.57e-20!13;UBERON:0005409!1.54e-18!59;UBERON:0004923!1.62e-13!24;UBERON:0003350!7.06e-13!9;UBERON:0004808!7.06e-13!9;UBERON:0001277!7.06e-13!9;UBERON:0000485!3.06e-10!11;UBERON:0001007!2.22e-07!128;UBERON:0001555!2.22e-07!128;UBERON:0007026!2.22e-07!128;UBERON:0004119!3.79e-07!130;UBERON:0000925!3.79e-07!130;UBERON:0006595!3.79e-07!130;UBERON:0000331!6.27e-07!3;UBERON:0002116!6.27e-07!3;UBERON:0001204!6.27e-07!3;UBERON:0001168!6.27e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.81e-30,15;UBERON:0000160,6.48e-27,31;UBERON:0001242,3.09e-22,13;UBERON:0001262,3.09e-22,13;UBERON:0004786,3.09e-22,13;UBERON:0004923,1.60e-18,24;UBERON:0005409,4.82e-17,47;UBERON:0003350,7.67e-13,9;UBERON:0004808,7.67e-13,9;UBERON:0001277,7.67e-13,9;UBERON:0002108,2.94e-11,4;UBERON:0001962,3.40e-11,2;UBERON:0001961,3.40e-11,2;UBERON:0001744,3.40e-11,2;UBERON:0000485,1.75e-10,11;UBERON:0001007,7.15e-08,116;UBERON:0001555,7.15e-08,116;UBERON:0007026,7.15e-08,116;UBERON:0002465,9.79e-08,3;UBERON:0004119,1.08e-07,118;UBERON:0000925,1.08e-07,118;UBERON:0006595,1.08e-07,118;UBERON:0000331,2.04e-07,3;UBERON:0002116,2.04e-07,3;UBERON:0001204,2.04e-07,3;UBERON:0001168,2.04e-07,3|phase1_expression=0,3.14077866875425,2.72999543633722,2.11724947914781,1.50268718983904,0.671517087647559,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75972722056264,7.11168771308227,2.8711598205751,3.4460959692726,4.52489588640367,3.23039813075836,2.77233142735924,0.886922042621219,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.05780226665418,0,0,0.257734922644187,1.21010114774006,0,0.190225626112559,1.89811624617805,0.658795818896044,0.251335208800269,0.397912944082302,0,0,0.864552199498777,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0.818462086339379,0,0.192906610981141,0,0,0,0,0,0|short_description=p6@Tm4sf5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:75604 | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=39bp_to_ENSMUST00000141924_5end | |||
|cluster_id=chr11:70323747..70323757,+ | |||
|description=CAGE_peak_6_at_Tm4sf5_5end | |||
|id=chr11:70323747..70323757,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.06e-13!9;CL:0002251!7.06e-13!9;CL:0000239!5.33e-12!6;CL:0000677!5.33e-12!6;CL:0000212!5.33e-12!6;CL:0000584!5.33e-12!6;CL:0000075!3.78e-10!7;CL:0000066!1.76e-07!25;CL:0000473!2.67e-07!3;CL:0000627!2.67e-07!3;CL:0000682!2.67e-07!3;CL:0002076!4.34e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.65e-19,6;CL:0000677,2.65e-19,6;CL:0000584,2.65e-19,6;CL:0000075,1.55e-16,7;CL:0000682,1.72e-15,3;CL:0002563,7.67e-13,9;CL:0002251,7.67e-13,9;CL:0000066,3.11e-11,25;CL:0002076,1.21e-07,15;CL:0000473,6.61e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.09e-26!43;UBERON:0000344!6.33e-24!15;UBERON:0001242!5.57e-20!13;UBERON:0000060!5.57e-20!13;UBERON:0001262!5.57e-20!13;UBERON:0004786!5.57e-20!13;UBERON:0005409!1.54e-18!59;UBERON:0004923!1.62e-13!24;UBERON:0003350!7.06e-13!9;UBERON:0004808!7.06e-13!9;UBERON:0001277!7.06e-13!9;UBERON:0000485!3.06e-10!11;UBERON:0001007!2.22e-07!128;UBERON:0001555!2.22e-07!128;UBERON:0007026!2.22e-07!128;UBERON:0004119!3.79e-07!130;UBERON:0000925!3.79e-07!130;UBERON:0006595!3.79e-07!130;UBERON:0000331!6.27e-07!3;UBERON:0002116!6.27e-07!3;UBERON:0001204!6.27e-07!3;UBERON:0001168!6.27e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.81e-30,15;UBERON:0000160,6.48e-27,31;UBERON:0001242,3.09e-22,13;UBERON:0001262,3.09e-22,13;UBERON:0004786,3.09e-22,13;UBERON:0004923,1.60e-18,24;UBERON:0005409,4.82e-17,47;UBERON:0003350,7.67e-13,9;UBERON:0004808,7.67e-13,9;UBERON:0001277,7.67e-13,9;UBERON:0002108,2.94e-11,4;UBERON:0001962,3.40e-11,2;UBERON:0001961,3.40e-11,2;UBERON:0001744,3.40e-11,2;UBERON:0000485,1.75e-10,11;UBERON:0001007,7.15e-08,116;UBERON:0001555,7.15e-08,116;UBERON:0007026,7.15e-08,116;UBERON:0002465,9.79e-08,3;UBERON:0004119,1.08e-07,118;UBERON:0000925,1.08e-07,118;UBERON:0006595,1.08e-07,118;UBERON:0000331,2.04e-07,3;UBERON:0002116,2.04e-07,3;UBERON:0001204,2.04e-07,3;UBERON:0001168,2.04e-07,3 | |||
|phase1_expression=0,3.14077866875425,2.72999543633722,2.11724947914781,1.50268718983904,0.671517087647559,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75972722056264,7.11168771308227,2.8711598205751,3.4460959692726,4.52489588640367,3.23039813075836,2.77233142735924,0.886922042621219,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.05780226665418,0,0,0.257734922644187,1.21010114774006,0,0.190225626112559,1.89811624617805,0.658795818896044,0.251335208800269,0.397912944082302,0,0,0.864552199498777,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0.818462086339379,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p6@Tm4sf5 | |||
}} |
Revision as of 21:12, 3 August 2015
Short description: | p6@Tm4sf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tm4sf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | 39bp_to_ENSMUST00000141924_5end |
EntrezGene: | 75604 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.65e-19 | 6 |
gut absorptive cell | 2.65e-19 | 6 |
enterocyte | 2.65e-19 | 6 |
columnar/cuboidal epithelial cell | 1.55e-16 | 7 |
M cell of gut | 1.72e-15 | 3 |
intestinal epithelial cell | 7.67e-13 | 9 |
epithelial cell of alimentary canal | 7.67e-13 | 9 |
epithelial cell | 3.11e-11 | 25 |
endo-epithelial cell | 1.21e-07 | 15 |
defensive cell | 6.61e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.81e-30 | 15 |
intestine | 6.48e-27 | 31 |
intestinal mucosa | 3.09e-22 | 13 |
wall of intestine | 3.09e-22 | 13 |
gastrointestinal system mucosa | 3.09e-22 | 13 |
organ component layer | 1.60e-18 | 24 |
gastrointestinal system | 4.82e-17 | 47 |
epithelium of mucosa | 7.67e-13 | 9 |
gastrointestinal system epithelium | 7.67e-13 | 9 |
intestinal epithelium | 7.67e-13 | 9 |
small intestine | 2.94e-11 | 4 |
gut-associated lymphoid tissue | 3.40e-11 | 2 |
mucosa-associated lymphoid tissue | 3.40e-11 | 2 |
lymphoid tissue | 3.40e-11 | 2 |
simple columnar epithelium | 1.75e-10 | 11 |
digestive system | 7.15e-08 | 116 |
digestive tract | 7.15e-08 | 116 |
primitive gut | 7.15e-08 | 116 |
lymphoid system | 9.79e-08 | 3 |
endoderm-derived structure | 1.08e-07 | 118 |
endoderm | 1.08e-07 | 118 |
presumptive endoderm | 1.08e-07 | 118 |
ileal mucosa | 2.04e-07 | 3 |
ileum | 2.04e-07 | 3 |
mucosa of small intestine | 2.04e-07 | 3 |
wall of small intestine | 2.04e-07 | 3 |