FFCP PHASE1:Hg19::chr3:126937310..126937322,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C307 | |||
|description=CAGE_peak_at_chr3:126937310..126937322,- | |||
|id=chr3:126937310..126937322,- | |||
|ontology_enrichment_celltype=CL:0002032!5.40e-10!165;CL:0000837!5.40e-10!165;CL:0000037!2.14e-09!172;CL:0000566!2.14e-09!172;CL:0000988!1.27e-08!182;CL:0000945!4.98e-07!24;CL:0000826!4.98e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000817;2.09e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.12e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!7.14e-29!51;DOID:0060083!7.14e-29!51;DOID:1240!8.12e-27!39;DOID:8692!1.03e-21!31;DOID:0050686!2.98e-09!137;DOID:9119!7.49e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:9119;1.07e-23;1!DOID:1240;4.10e-23;39!DOID:2531;5.76e-21;51!DOID:0060083;5.76e-21;51!DOID:8692;2.37e-17;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.40e-27,39;DOID:2531,1.98e-27,51;DOID:0060083,1.98e-27,51;DOID:9119,1.07e-23,1;DOID:8692,4.75e-18,31;DOID:0050686,4.90e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0000200!2.18e-20!6;UBERON:0002771!2.46e-15!3;UBERON:0001950!1.08e-13!20;UBERON:0002619!2.13e-12!22;UBERON:0001870!4.52e-11!2;UBERON:0000956!7.86e-11!25;UBERON:0000203!7.86e-11!25;UBERON:0001871!6.83e-10!7;UBERON:0001869!2.77e-08!32;UBERON:0002791!5.25e-08!33;UBERON:0002020!9.60e-08!34;UBERON:0003528!9.60e-08!34;UBERON:0001893!9.60e-08!34;UBERON:0004177!2.51e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.30e-08,3;UBERON:0004854,1.30e-08,3;UBERON:0009034,1.30e-08,3;UBERON:0002095,1.30e-08,3;UBERON:0004782,1.30e-08,3;UBERON:0003281,1.30e-08,3;UBERON:0009664,1.30e-08,3;UBERON:0002296,1.30e-08,3;UBERON:0005602,1.30e-08,3;UBERON:0001179,1.30e-08,3;UBERON:0006293,1.30e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45257662059956,0,1.91311527274587,0.59873811429845,0,0,2.59697552219644,0,0.912938716132769,0,2.50634477090067,0,0,0,0,1.03051603426729,0.614481528616916,0.894704431569664,0.166849141711909,0,0,0,0,16.9866703678888,0,0,0,0,0.66866030566487,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,4.39544717906069,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,1.02520268501629,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59905849479886,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710478008196067,0.931120714437869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr3:126937310..126937322,- | |||
}} |
Revision as of 21:08, 21 January 2014
Short description: | p@chr3:126937310..126937322, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:126937310..126937322, - |
Coexpression cluster: | C307_acute_chronic_leukemia_CD133_Mast_CD34_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.30e-08 | 3 |
gastrointestinal system mesentery | 1.30e-08 | 3 |
stomach region | 1.30e-08 | 3 |
mesentery | 1.30e-08 | 3 |
gastrointestinal system serosa | 1.30e-08 | 3 |
mesentery of stomach | 1.30e-08 | 3 |
gut mesentery | 1.30e-08 | 3 |
dorsal mesentery | 1.30e-08 | 3 |
dorsal mesogastrium | 1.30e-08 | 3 |
peritoneal cavity | 1.30e-08 | 3 |
spleen primordium | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.40e-27 | 39 |
hematologic cancer | 1.98e-27 | 51 |
immune system cancer | 1.98e-27 | 51 |
acute myeloid leukemia | 1.07e-23 | 1 |
myeloid leukemia | 4.75e-18 | 31 |
organ system cancer | 4.90e-10 | 137 |