FFCP PHASE1:Mm9::chr12:114568638..114568651,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114568638..114568651,-|id=chr12:114568638..114568651,-|ontology_enrichment_celltype=CL:0002027!3.71e-25!3;CL:0002006!3.71e-25!3;CL:0002024!3.71e-25!3;CL:0000553!6.34e-13!6;CL:0000556!6.34e-13!6;CL:0000050!8.22e-09!9;CL:0000414!2.64e-07!11|ontology_enrichment_celltype_v019_2=CL:0002027,4.98e-38,3;CL:0002006,4.98e-38,3;CL:0002024,4.98e-38,3;CL:0000553,1.83e-19,6;CL:0000556,1.83e-19,6;CL:0000050,3.07e-13,9;CL:0000839,2.21e-09,13;CL:0000763,9.61e-08,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!7.81e-25!3;UBERON:0001962!8.27e-17!2;UBERON:0001961!8.27e-17!2;UBERON:0001744!8.27e-17!2;UBERON:0000029!9.82e-10!1;UBERON:0001097!9.82e-10!1;UBERON:0003968!9.82e-10!1;UBERON:0008785!9.82e-10!1;UBERON:0001467!9.82e-10!1;UBERON:0001421!9.82e-10!1;UBERON:0001044!1.73e-09!1;UBERON:0001736!1.73e-09!1;UBERON:0003293!1.73e-09!1;UBERON:0003294!1.73e-09!1;UBERON:0010047!1.73e-09!1;UBERON:0001829!1.73e-09!1;UBERON:0000167!1.73e-09!1;UBERON:0006298!1.73e-09!1;UBERON:0003199!2.09e-09!1;UBERON:0002193!6.43e-08!48;UBERON:0007823!1.94e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.93e-18,3;UBERON:0000029,3.62e-14,1;UBERON:0001097,3.62e-14,1;UBERON:0003968,3.62e-14,1;UBERON:0001467,3.62e-14,1;UBERON:0001044,8.69e-14,1;UBERON:0001736,8.69e-14,1;UBERON:0003293,8.69e-14,1;UBERON:0003294,8.69e-14,1;UBERON:0001829,8.69e-14,1;UBERON:0010047,8.69e-14,1;UBERON:0000167,8.69e-14,1;UBERON:0006298,8.69e-14,1;UBERON:0003199,1.16e-13,1;UBERON:0002193,1.38e-09,48;UBERON:0002405,1.38e-09,48;UBERON:0002371,9.61e-08,16;UBERON:0000165,1.52e-07,2;UBERON:0000166,1.52e-07,2;UBERON:0000930,1.52e-07,2;UBERON:0001962,1.76e-07,2;UBERON:0001961,1.76e-07,2;UBERON:0001744,1.76e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,5.4668322195253,1.39912375625629,0,0,0,0,0,0,0.799962113967033,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,28.7421050848361,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19609616558497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:114568638..114568651,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:114568638..114568651,- | |||
|description=CAGE_peak_at_chr12:114568638..114568651,- | |||
|id=chr12:114568638..114568651,- | |||
|ontology_enrichment_celltype=CL:0002027!3.71e-25!3;CL:0002006!3.71e-25!3;CL:0002024!3.71e-25!3;CL:0000553!6.34e-13!6;CL:0000556!6.34e-13!6;CL:0000050!8.22e-09!9;CL:0000414!2.64e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,4.98e-38,3;CL:0002006,4.98e-38,3;CL:0002024,4.98e-38,3;CL:0000553,1.83e-19,6;CL:0000556,1.83e-19,6;CL:0000050,3.07e-13,9;CL:0000839,2.21e-09,13;CL:0000763,9.61e-08,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!7.81e-25!3;UBERON:0001962!8.27e-17!2;UBERON:0001961!8.27e-17!2;UBERON:0001744!8.27e-17!2;UBERON:0000029!9.82e-10!1;UBERON:0001097!9.82e-10!1;UBERON:0003968!9.82e-10!1;UBERON:0008785!9.82e-10!1;UBERON:0001467!9.82e-10!1;UBERON:0001421!9.82e-10!1;UBERON:0001044!1.73e-09!1;UBERON:0001736!1.73e-09!1;UBERON:0003293!1.73e-09!1;UBERON:0003294!1.73e-09!1;UBERON:0010047!1.73e-09!1;UBERON:0001829!1.73e-09!1;UBERON:0000167!1.73e-09!1;UBERON:0006298!1.73e-09!1;UBERON:0003199!2.09e-09!1;UBERON:0002193!6.43e-08!48;UBERON:0007823!1.94e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.93e-18,3;UBERON:0000029,3.62e-14,1;UBERON:0001097,3.62e-14,1;UBERON:0003968,3.62e-14,1;UBERON:0001467,3.62e-14,1;UBERON:0001044,8.69e-14,1;UBERON:0001736,8.69e-14,1;UBERON:0003293,8.69e-14,1;UBERON:0003294,8.69e-14,1;UBERON:0001829,8.69e-14,1;UBERON:0010047,8.69e-14,1;UBERON:0000167,8.69e-14,1;UBERON:0006298,8.69e-14,1;UBERON:0003199,1.16e-13,1;UBERON:0002193,1.38e-09,48;UBERON:0002405,1.38e-09,48;UBERON:0002371,9.61e-08,16;UBERON:0000165,1.52e-07,2;UBERON:0000166,1.52e-07,2;UBERON:0000930,1.52e-07,2;UBERON:0001962,1.76e-07,2;UBERON:0001961,1.76e-07,2;UBERON:0001744,1.76e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,5.4668322195253,1.39912375625629,0,0,0,0,0,0,0.799962113967033,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,28.7421050848361,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19609616558497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:114568638..114568651,- | |||
}} |
Latest revision as of 19:42, 4 August 2015
Short description: | p@chr12:114568638..114568651, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114568638..114568651, - |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 4.98e-38 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.98e-38 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.98e-38 | 3 |
megakaryocyte progenitor cell | 1.83e-19 | 6 |
megakaryocyte | 1.83e-19 | 6 |
megakaryocyte-erythroid progenitor cell | 3.07e-13 | 9 |
myeloid lineage restricted progenitor cell | 2.21e-09 | 13 |
myeloid cell | 9.61e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 8.93e-18 | 3 |
lymph node | 3.62e-14 | 1 |
axillary lymph node | 3.62e-14 | 1 |
peripheral lymph node | 3.62e-14 | 1 |
shoulder | 3.62e-14 | 1 |
saliva-secreting gland | 8.69e-14 | 1 |
submandibular gland | 8.69e-14 | 1 |
gland of oral region | 8.69e-14 | 1 |
gland of foregut | 8.69e-14 | 1 |
major salivary gland | 8.69e-14 | 1 |
oral gland | 8.69e-14 | 1 |
oral cavity | 8.69e-14 | 1 |
submandibular gland primordium | 8.69e-14 | 1 |
egg chamber | 1.16e-13 | 1 |
hemolymphoid system | 1.38e-09 | 48 |
immune system | 1.38e-09 | 48 |
bone marrow | 9.61e-08 | 16 |
mouth | 1.52e-07 | 2 |
oral opening | 1.52e-07 | 2 |
stomodeum | 1.52e-07 | 2 |
gut-associated lymphoid tissue | 1.76e-07 | 2 |
mucosa-associated lymphoid tissue | 1.76e-07 | 2 |
lymphoid tissue | 1.76e-07 | 2 |