FFCP PHASE1:Mm9::chr13:54821506..54821522,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:54821506..54821522,+|id=chr13:54821506..54821522,+|ontology_enrichment_celltype=CL:0000239!3.70e-10!6;CL:0000677!3.70e-10!6;CL:0000212!3.70e-10!6;CL:0000584!3.70e-10!6;CL:0000075!1.19e-08!7|ontology_enrichment_celltype_v019_2=CL:0000239,1.39e-10,6;CL:0000677,1.39e-10,6;CL:0000584,1.39e-10,6;CL:0000075,3.74e-09,7;CL:0002563,3.09e-07,9;CL:0002251,3.09e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.99e-23!43;UBERON:0005409!1.18e-18!59;UBERON:0000344!1.19e-18!15;UBERON:0004923!5.95e-15!24;UBERON:0001242!2.60e-14!13;UBERON:0000060!2.60e-14!13;UBERON:0001262!2.60e-14!13;UBERON:0004786!2.60e-14!13;UBERON:0004119!1.30e-08!130;UBERON:0000925!1.30e-08!130;UBERON:0006595!1.30e-08!130;UBERON:0000331!2.20e-08!3;UBERON:0002116!2.20e-08!3;UBERON:0001204!2.20e-08!3;UBERON:0001168!2.20e-08!3;UBERON:0001007!5.19e-08!128;UBERON:0001555!5.19e-08!128;UBERON:0007026!5.19e-08!128|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.42e-28,15;UBERON:0000160,5.75e-21,31;UBERON:0001242,1.13e-18,13;UBERON:0001262,1.13e-18,13;UBERON:0004786,1.13e-18,13;UBERON:0004923,1.20e-17,24;UBERON:0005409,2.23e-16,47;UBERON:0001962,6.53e-15,2;UBERON:0001961,6.53e-15,2;UBERON:0001744,6.53e-15,2;UBERON:0000331,2.41e-10,3;UBERON:0002116,2.41e-10,3;UBERON:0001204,2.41e-10,3;UBERON:0001168,2.41e-10,3;UBERON:0002465,2.97e-10,3;UBERON:0001007,9.76e-09,116;UBERON:0001555,9.76e-09,116;UBERON:0007026,9.76e-09,116;UBERON:0004119,1.45e-08,118;UBERON:0000925,1.45e-08,118;UBERON:0006595,1.45e-08,118;UBERON:0003199,4.10e-08,1;UBERON:0002108,5.65e-08,4;UBERON:0003350,3.09e-07,9;UBERON:0004808,3.09e-07,9;UBERON:0001277,3.09e-07,9|phase1_expression=0,1.39590163055744,1.36499771816861,1.20985684522732,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,1.83527424853736,0,0.430761996159075,0.646413698057667,4.75058548640935,2.26827116783938,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,2.31293148088659,0,0,0,0,0.403367049246685,0,1.14135375667535,2.37264530772256,0.988193728344065,0.251335208800269,0.994782360205754,0.779856348476481,0.898819408654221,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,1.16653475962614,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:54821506..54821522,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:54821506..54821522,+ | |||
|description=CAGE_peak_at_chr13:54821506..54821522,+ | |||
|id=chr13:54821506..54821522,+ | |||
|ontology_enrichment_celltype=CL:0000239!3.70e-10!6;CL:0000677!3.70e-10!6;CL:0000212!3.70e-10!6;CL:0000584!3.70e-10!6;CL:0000075!1.19e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.39e-10,6;CL:0000677,1.39e-10,6;CL:0000584,1.39e-10,6;CL:0000075,3.74e-09,7;CL:0002563,3.09e-07,9;CL:0002251,3.09e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.99e-23!43;UBERON:0005409!1.18e-18!59;UBERON:0000344!1.19e-18!15;UBERON:0004923!5.95e-15!24;UBERON:0001242!2.60e-14!13;UBERON:0000060!2.60e-14!13;UBERON:0001262!2.60e-14!13;UBERON:0004786!2.60e-14!13;UBERON:0004119!1.30e-08!130;UBERON:0000925!1.30e-08!130;UBERON:0006595!1.30e-08!130;UBERON:0000331!2.20e-08!3;UBERON:0002116!2.20e-08!3;UBERON:0001204!2.20e-08!3;UBERON:0001168!2.20e-08!3;UBERON:0001007!5.19e-08!128;UBERON:0001555!5.19e-08!128;UBERON:0007026!5.19e-08!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.42e-28,15;UBERON:0000160,5.75e-21,31;UBERON:0001242,1.13e-18,13;UBERON:0001262,1.13e-18,13;UBERON:0004786,1.13e-18,13;UBERON:0004923,1.20e-17,24;UBERON:0005409,2.23e-16,47;UBERON:0001962,6.53e-15,2;UBERON:0001961,6.53e-15,2;UBERON:0001744,6.53e-15,2;UBERON:0000331,2.41e-10,3;UBERON:0002116,2.41e-10,3;UBERON:0001204,2.41e-10,3;UBERON:0001168,2.41e-10,3;UBERON:0002465,2.97e-10,3;UBERON:0001007,9.76e-09,116;UBERON:0001555,9.76e-09,116;UBERON:0007026,9.76e-09,116;UBERON:0004119,1.45e-08,118;UBERON:0000925,1.45e-08,118;UBERON:0006595,1.45e-08,118;UBERON:0003199,4.10e-08,1;UBERON:0002108,5.65e-08,4;UBERON:0003350,3.09e-07,9;UBERON:0004808,3.09e-07,9;UBERON:0001277,3.09e-07,9 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,1.20985684522732,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,1.83527424853736,0,0.430761996159075,0.646413698057667,4.75058548640935,2.26827116783938,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,2.31293148088659,0,0,0,0,0.403367049246685,0,1.14135375667535,2.37264530772256,0.988193728344065,0.251335208800269,0.994782360205754,0.779856348476481,0.898819408654221,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,1.16653475962614,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:54821506..54821522,+ | |||
}} |
Latest revision as of 03:26, 6 August 2015
Short description: | p@chr13:54821506..54821522, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:54821506..54821522, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.39e-10 | 6 |
gut absorptive cell | 1.39e-10 | 6 |
enterocyte | 1.39e-10 | 6 |
columnar/cuboidal epithelial cell | 3.74e-09 | 7 |
intestinal epithelial cell | 3.09e-07 | 9 |
epithelial cell of alimentary canal | 3.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.42e-28 | 15 |
intestine | 5.75e-21 | 31 |
intestinal mucosa | 1.13e-18 | 13 |
wall of intestine | 1.13e-18 | 13 |
gastrointestinal system mucosa | 1.13e-18 | 13 |
organ component layer | 1.20e-17 | 24 |
gastrointestinal system | 2.23e-16 | 47 |
gut-associated lymphoid tissue | 6.53e-15 | 2 |
mucosa-associated lymphoid tissue | 6.53e-15 | 2 |
lymphoid tissue | 6.53e-15 | 2 |
ileal mucosa | 2.41e-10 | 3 |
ileum | 2.41e-10 | 3 |
mucosa of small intestine | 2.41e-10 | 3 |
wall of small intestine | 2.41e-10 | 3 |
lymphoid system | 2.97e-10 | 3 |
digestive system | 9.76e-09 | 116 |
digestive tract | 9.76e-09 | 116 |
primitive gut | 9.76e-09 | 116 |
endoderm-derived structure | 1.45e-08 | 118 |
endoderm | 1.45e-08 | 118 |
presumptive endoderm | 1.45e-08 | 118 |
egg chamber | 4.10e-08 | 1 |
small intestine | 5.65e-08 | 4 |
epithelium of mucosa | 3.09e-07 | 9 |
gastrointestinal system epithelium | 3.09e-07 | 9 |
intestinal epithelium | 3.09e-07 | 9 |