FFCP PHASE1:Mm9::chr13:58465960..58465979,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:58465960..58465979,+|id=chr13:58465960..58465979,+|ontology_enrichment_celltype=CL:0002563!9.84e-19!9;CL:0002251!9.84e-19!9;CL:0000239!3.95e-17!6;CL:0000677!3.95e-17!6;CL:0000212!3.95e-17!6;CL:0000584!3.95e-17!6;CL:0000075!1.40e-14!7;CL:0000066!1.17e-11!25;CL:0002076!1.07e-10!15;CL:0000473!9.67e-10!3;CL:0000627!9.67e-10!3;CL:0000682!9.67e-10!3;CL:0000223!1.09e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,9.20e-33,6;CL:0000677,9.20e-33,6;CL:0000584,9.20e-33,6;CL:0000075,4.70e-28,7;CL:0002563,9.07e-22,9;CL:0002251,9.07e-22,9;CL:0000682,6.33e-18,3;CL:0000066,4.08e-17,25;CL:0002076,6.12e-13,15;CL:0000223,1.30e-09,20;CL:0000473,5.51e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.83e-34!15;UBERON:0001242!1.45e-28!13;UBERON:0000060!1.45e-28!13;UBERON:0001262!1.45e-28!13;UBERON:0004786!1.45e-28!13;UBERON:0000160!3.95e-26!43;UBERON:0004923!6.54e-23!24;UBERON:0005409!1.58e-19!59;UBERON:0003350!9.84e-19!9;UBERON:0004808!9.84e-19!9;UBERON:0001277!9.84e-19!9;UBERON:0000485!4.41e-15!11;UBERON:0000331!5.03e-09!3;UBERON:0002116!5.03e-09!3;UBERON:0001204!5.03e-09!3;UBERON:0001168!5.03e-09!3;UBERON:0001007!4.56e-08!128;UBERON:0001555!4.56e-08!128;UBERON:0007026!4.56e-08!128;UBERON:0004119!7.35e-08!130;UBERON:0000925!7.35e-08!130;UBERON:0006595!7.35e-08!130;UBERON:0001962!7.65e-07!2;UBERON:0001961!7.65e-07!2;UBERON:0001744!7.65e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.33e-42,15;UBERON:0001242,8.00e-33,13;UBERON:0001262,8.00e-33,13;UBERON:0004786,8.00e-33,13;UBERON:0004923,3.67e-26,24;UBERON:0003350,9.07e-22,9;UBERON:0004808,9.07e-22,9;UBERON:0001277,9.07e-22,9;UBERON:0000160,4.92e-20,31;UBERON:0000485,9.24e-18,11;UBERON:0000331,1.71e-16,3;UBERON:0002116,1.71e-16,3;UBERON:0001204,1.71e-16,3;UBERON:0001168,1.71e-16,3;UBERON:0005409,9.69e-13,47;UBERON:0002108,1.59e-12,4;UBERON:0001962,3.84e-12,2;UBERON:0001961,3.84e-12,2;UBERON:0001744,3.84e-12,2;UBERON:0002465,2.18e-08,3;UBERON:0003199,6.09e-07,1|phase1_expression=0,10.1202868215415,8.18998630901165,2.72217790176147,2.00358291978539,1.84667199103079,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,3.21172993494038,3.44539178469012,5.59990595006797,3.44753972297422,1.52018735565099,2.77233142735924,1.99557459589774,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0.380451252225118,0.474529061544512,0.329397909448022,0.754005626400808,0.994782360205754,0.974820435595601,0,3.45820879799511,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p@chr13:58465960..58465979,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:58465960..58465979,+ | |||
|description=CAGE_peak_at_chr13:58465960..58465979,+ | |||
|id=chr13:58465960..58465979,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.84e-19!9;CL:0002251!9.84e-19!9;CL:0000239!3.95e-17!6;CL:0000677!3.95e-17!6;CL:0000212!3.95e-17!6;CL:0000584!3.95e-17!6;CL:0000075!1.40e-14!7;CL:0000066!1.17e-11!25;CL:0002076!1.07e-10!15;CL:0000473!9.67e-10!3;CL:0000627!9.67e-10!3;CL:0000682!9.67e-10!3;CL:0000223!1.09e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.20e-33,6;CL:0000677,9.20e-33,6;CL:0000584,9.20e-33,6;CL:0000075,4.70e-28,7;CL:0002563,9.07e-22,9;CL:0002251,9.07e-22,9;CL:0000682,6.33e-18,3;CL:0000066,4.08e-17,25;CL:0002076,6.12e-13,15;CL:0000223,1.30e-09,20;CL:0000473,5.51e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.83e-34!15;UBERON:0001242!1.45e-28!13;UBERON:0000060!1.45e-28!13;UBERON:0001262!1.45e-28!13;UBERON:0004786!1.45e-28!13;UBERON:0000160!3.95e-26!43;UBERON:0004923!6.54e-23!24;UBERON:0005409!1.58e-19!59;UBERON:0003350!9.84e-19!9;UBERON:0004808!9.84e-19!9;UBERON:0001277!9.84e-19!9;UBERON:0000485!4.41e-15!11;UBERON:0000331!5.03e-09!3;UBERON:0002116!5.03e-09!3;UBERON:0001204!5.03e-09!3;UBERON:0001168!5.03e-09!3;UBERON:0001007!4.56e-08!128;UBERON:0001555!4.56e-08!128;UBERON:0007026!4.56e-08!128;UBERON:0004119!7.35e-08!130;UBERON:0000925!7.35e-08!130;UBERON:0006595!7.35e-08!130;UBERON:0001962!7.65e-07!2;UBERON:0001961!7.65e-07!2;UBERON:0001744!7.65e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.33e-42,15;UBERON:0001242,8.00e-33,13;UBERON:0001262,8.00e-33,13;UBERON:0004786,8.00e-33,13;UBERON:0004923,3.67e-26,24;UBERON:0003350,9.07e-22,9;UBERON:0004808,9.07e-22,9;UBERON:0001277,9.07e-22,9;UBERON:0000160,4.92e-20,31;UBERON:0000485,9.24e-18,11;UBERON:0000331,1.71e-16,3;UBERON:0002116,1.71e-16,3;UBERON:0001204,1.71e-16,3;UBERON:0001168,1.71e-16,3;UBERON:0005409,9.69e-13,47;UBERON:0002108,1.59e-12,4;UBERON:0001962,3.84e-12,2;UBERON:0001961,3.84e-12,2;UBERON:0001744,3.84e-12,2;UBERON:0002465,2.18e-08,3;UBERON:0003199,6.09e-07,1 | |||
|phase1_expression=0,10.1202868215415,8.18998630901165,2.72217790176147,2.00358291978539,1.84667199103079,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,3.21172993494038,3.44539178469012,5.59990595006797,3.44753972297422,1.52018735565099,2.77233142735924,1.99557459589774,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0.380451252225118,0.474529061544512,0.329397909448022,0.754005626400808,0.994782360205754,0.974820435595601,0,3.45820879799511,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr13:58465960..58465979,+ | |||
}} |
Latest revision as of 05:03, 6 August 2015
Short description: | p@chr13:58465960..58465979, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:58465960..58465979, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.20e-33 | 6 |
gut absorptive cell | 9.20e-33 | 6 |
enterocyte | 9.20e-33 | 6 |
columnar/cuboidal epithelial cell | 4.70e-28 | 7 |
intestinal epithelial cell | 9.07e-22 | 9 |
epithelial cell of alimentary canal | 9.07e-22 | 9 |
M cell of gut | 6.33e-18 | 3 |
epithelial cell | 4.08e-17 | 25 |
endo-epithelial cell | 6.12e-13 | 15 |
endodermal cell | 1.30e-09 | 20 |
defensive cell | 5.51e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.33e-42 | 15 |
intestinal mucosa | 8.00e-33 | 13 |
wall of intestine | 8.00e-33 | 13 |
gastrointestinal system mucosa | 8.00e-33 | 13 |
organ component layer | 3.67e-26 | 24 |
epithelium of mucosa | 9.07e-22 | 9 |
gastrointestinal system epithelium | 9.07e-22 | 9 |
intestinal epithelium | 9.07e-22 | 9 |
intestine | 4.92e-20 | 31 |
simple columnar epithelium | 9.24e-18 | 11 |
ileal mucosa | 1.71e-16 | 3 |
ileum | 1.71e-16 | 3 |
mucosa of small intestine | 1.71e-16 | 3 |
wall of small intestine | 1.71e-16 | 3 |
gastrointestinal system | 9.69e-13 | 47 |
small intestine | 1.59e-12 | 4 |
gut-associated lymphoid tissue | 3.84e-12 | 2 |
mucosa-associated lymphoid tissue | 3.84e-12 | 2 |
lymphoid tissue | 3.84e-12 | 2 |
lymphoid system | 2.18e-08 | 3 |
egg chamber | 6.09e-07 | 1 |