FFCP PHASE1:Hg19::chr4:13890014..13890023,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr4:13890014..13890023,+ | |||
|id=chr4:13890014..13890023,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.70e-08!180;CL:0000708!2.15e-07!3;CL:0000144!2.76e-07!625;CL:0002371!3.54e-07!591;CL:0000548!4.29e-07!679;CL:0000004!4.29e-07!679;CL:0000255!4.29e-07!679;CL:0000012!5.75e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002556;1.41e-15;6!CL:0000134;1.79e-07;55!CL:1000306;6.50e-07;4!CL:0002547;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,1.31e-15,6;CL:1000306,6.50e-07,4;CL:0002547,6.50e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.23e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.24e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000075!6.64e-08!13;UBERON:0005944!6.64e-08!13;UBERON:0004288!6.64e-08!13;UBERON:0003089!6.64e-08!13;UBERON:0003210!2.15e-07!3;UBERON:0003129!2.45e-07!11;UBERON:0000914!5.06e-07!83;UBERON:0002329!5.06e-07!83;UBERON:0003077!5.06e-07!83;UBERON:0003059!5.06e-07!83;UBERON:0007282!5.06e-07!83;UBERON:0009618!5.06e-07!83;UBERON:0007285!5.06e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.41e-15;6!UBERON:0003672;1.41e-15;6!UBERON:0003129;1.69e-13;7!UBERON:0011137;6.10e-09;11!UBERON:0010323;6.10e-09;11!UBERON:0004797;6.50e-07;4!UBERON:0000415;6.50e-07;4!UBERON:0007240;6.50e-07;4!UBERON:0005742;6.50e-07;4!UBERON:0005734;6.50e-07;4!UBERON:0004664;6.50e-07;4!UBERON:0004663;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,1.31e-15,6;UBERON:0003672,1.31e-15,6;UBERON:0003129,1.58e-13,7;UBERON:0010323,5.87e-09,11;UBERON:0011137,3.14e-07,14;UBERON:0000415,6.50e-07,4;UBERON:0007240,6.50e-07,4;UBERON:0005742,6.50e-07,4;UBERON:0005734,6.50e-07,4;UBERON:0004664,6.50e-07,4;UBERON:0004663,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0,0.516833518338658,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,6.75286822147416,0,0.354668382198357,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0,0,0.70296429550139,0,0,0.149448680551801,0,0,0,0.61246251376468,0.61417158655884,0.309977343527296,0,0,0,0,1.0100166837244,0,1.38532057742091,0.438977620880838,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.8800594298514,0.129271715757778,0,0,0,0,0,0,0.799266537048298,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.255679882248303,0,0.165284915360978,0,0,0,0,0,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0.949138274156178,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0.333926115068718,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,2.66943366478961,0,0.453692771289717,0,0,0.318593534327405,0,0,0,0,1.04349012362347,0,0,0,0,0.107410557042488,0.464033759878494,1.19428766609585,0,0,0,0,0,0,0,0,0,0,2.32815493405934,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0.462102664601353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:13890014..13890023,+ | |||
}} |
Revision as of 00:15, 22 January 2014
Short description: | p@chr4:13890014..13890023, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:13890014..13890023, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 1.31e-15 | 6 |
fibroblast of tunica adventitia of artery | 6.50e-07 | 4 |
fibroblast of the aortic adventitia | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
periodontium | 1.31e-15 | 6 |
dentition | 1.31e-15 | 6 |
skull | 1.58e-13 | 7 |
cranial skeletal system | 5.87e-09 | 11 |
axial skeletal system | 3.14e-07 | 14 |
artery wall | 6.50e-07 | 4 |
tunica adventitia of artery | 6.50e-07 | 4 |
adventitia | 6.50e-07 | 4 |
tunica adventitia of blood vessel | 6.50e-07 | 4 |
aorta tunica adventitia | 6.50e-07 | 4 |
aorta wall | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.24e-07 | 14 |