FFCP PHASE1:Hg19::chr4:142054563..142054577,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57484 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23138 | |||
|TSSclassifier=strong | |||
|UniProt=Q9ULK6 | |||
|association_with_transcript=38bp_to_ENST00000306799,NM_020724,uc003iio.1,uc003iip.1,uc010iok.1_5end | |||
|coexpression_cluster_id=C1935 | |||
|description=CAGE_peak_6_at_RNF150_5end | |||
|id=chr4:142054563..142054577,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;3.40e-09;6!CL:0000098;3.40e-09;6!CL:0002167;3.40e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.78e-09,6;CL:0000098,2.78e-09,6;CL:0002167,2.78e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;7.26e-08;4!UBERON:0007284;7.26e-08;4!UBERON:0010122;2.26e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.99e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.96e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.05e-27!115;UBERON:0005743!7.63e-23!86;UBERON:0001017!7.99e-23!82;UBERON:0000073!1.81e-22!94;UBERON:0001016!1.81e-22!94;UBERON:0001049!1.11e-20!57;UBERON:0005068!1.11e-20!57;UBERON:0006241!1.11e-20!57;UBERON:0007135!1.11e-20!57;UBERON:0000955!3.88e-20!69;UBERON:0006238!3.88e-20!69;UBERON:0002616!4.19e-19!59;UBERON:0002346!2.13e-17!90;UBERON:0003080!1.12e-16!42;UBERON:0000924!1.39e-16!173;UBERON:0006601!1.39e-16!173;UBERON:0003075!4.56e-16!86;UBERON:0007284!4.56e-16!86;UBERON:0000153!4.67e-16!129;UBERON:0007811!4.67e-16!129;UBERON:0002780!4.69e-16!41;UBERON:0001890!4.69e-16!41;UBERON:0006240!4.69e-16!41;UBERON:0004121!2.08e-15!169;UBERON:0000033!2.23e-15!123;UBERON:0001869!5.25e-13!32;UBERON:0002020!1.48e-12!34;UBERON:0003528!1.48e-12!34;UBERON:0001893!1.50e-12!34;UBERON:0003056!2.55e-12!61;UBERON:0002791!4.39e-12!33;UBERON:0000956!3.74e-10!25;UBERON:0000203!3.74e-10!25;UBERON:0000475!1.37e-09!365;UBERON:0002619!1.50e-09!22;UBERON:0000481!3.54e-09!347;UBERON:0000468!2.00e-08!659;UBERON:0001950!3.27e-08!20;UBERON:0000062!1.01e-07!511;UBERON:0000064!5.41e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;5.15e-14;4!UBERON:0010133;5.15e-14;4!UBERON:0005383;2.11e-10;3!UBERON:0005382;2.11e-10;3!UBERON:0000922;1.57e-09;49!UBERON:0001894;5.26e-08;7!UBERON:0001905;5.62e-08;2!UBERON:0002757;5.62e-08;2!UBERON:0010134;5.62e-08;2!UBERON:0005408;5.62e-08;2!UBERON:0001899;5.62e-08;2!UBERON:0000369;6.68e-08;4!UBERON:0002435;6.68e-08;4!UBERON:0000204;6.68e-08;4!UBERON:0000007;1.01e-07;2!UBERON:0007100;1.02e-07;25!UBERON:0001873;2.26e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,5.82e-14,4;UBERON:0010133,5.82e-14,4;UBERON:0005383,1.69e-10,3;UBERON:0005382,1.69e-10,3;UBERON:0004121,4.13e-09,171;UBERON:0000924,4.13e-09,171;UBERON:0006601,4.13e-09,171;UBERON:0001905,4.51e-08,2;UBERON:0002757,4.51e-08,2;UBERON:0010134,4.51e-08,2;UBERON:0005408,4.51e-08,2;UBERON:0001899,4.51e-08,2;UBERON:0001894,5.63e-08,7;UBERON:0006222,5.63e-08,7;UBERON:0000369,5.66e-08,4;UBERON:0002435,5.66e-08,4;UBERON:0000204,5.66e-08,4;UBERON:0010082,5.66e-08,4;UBERON:0002346,1.06e-07,86;UBERON:0001873,1.28e-07,2;UBERON:0010122,1.28e-07,2;UBERON:0000007,1.41e-07,2;UBERON:0002780,2.80e-07,41;UBERON:0001890,2.80e-07,41;UBERON:0003080,2.80e-07,41;UBERON:0006240,2.80e-07,41;UBERON:0010314,3.01e-07,132;UBERON:0007100,5.40e-07,27 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,1.34088328328186,0,0,0.631719873426831,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.392937226493138,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.309977343527296,2.37600571456411,2.71993622206413,0,0,0,0.375355559615893,0,2.19488810440419,1.22595118319608,2.70428506031874,0.113432183160021,0.358779271377724,0.640672166455702,0.847727604638247,1.50045548042201,0.309157587715317,0.257640540045629,0.558350568994769,0,0.292311015483596,0.504867548488229,0.644349290496095,0.484938170456436,0.710019185033229,0.302256294682921,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,0.709840800239063,1.01150814046861,0.241011029883482,0.330881918197182,0.653638332277218,0.237270619111097,0.674156540800822,0.784885860501384,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0,0.775630294546667,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,2.29723871668228,0,0.434343920002738,0,0,0,0,0,0,0,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0,1.10422342547226,0,0,3.32753378449291,3.03329280955175,2.68094105557689,1.7571212248907,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0.247528499761764,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0.18532421910392,0.715624433709956,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0.445234820091624,0,0,0.996239941255349,0.276283915531148,0,0.511343412510774,0,0.933118762985422,0,0,0,0.591860433821602,0,0,0,0.371072392647405,1.99613798001194,0,0,0.724999575434793,0,0.254253650292766,0,0.689486746482929,0.291604613383254,0,1.77148277162768,2.89431452700979,0,0.663475559587348,1.47773809476774,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,1.99052386215701,0.619202951523374,2.4441205797345,0.593042257361244,0.247127877893006,0.626531697032732,0.202203398942031,0.802577647298789,0,0,0,0,0,0,1.53036380815245,0.126373159256976,0.150323419414493,0.518440956986236,0,0,0,0,0,0,0.520679215005393,0,0,1.22308667769421,0,0,0,0,0.872901148395775,0,1.58186518546373,0,0,0.696418755514666,0,0.721429382263803,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0.271808412147228,0.627617077873999,0.101998217636322,0,0,0.273810757783986,0,0,0,1.39641200636127,5.27068975226872,0,7.58780201896166,11.1598772515508,4.24025769139558,7.39018197353989,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0.817220436669454,0,0.412618309791701,0.415440338029185,0,0,0.668245123238271,0,0.315222829196793,0.367182116944987,0,0,0,2.1440859791201,5.29673576292345,0,0,0,0,0,0,0.511164065356265,0,0,0,0.387848869084652,0.26446520348538,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,2.72008901684737,3.0082787282724,4.28883807468846,2.62298104567844,0,0,0.976210119215705,0.625954653532499,0,0.332787154610557,0.620964029413834,2.76697269872462,0,0.303298235083296,0,0,0,0.434763085832475,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0.796191777397232,0.400027764663154,0.343395705182793,0,0,0,0,0,0.226705925512272,0.463044948647668,0.244736704506468,0.71635536432595,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0.737318726261158,0,0,0,0,0.567515953566836,0,0,0,0.639471856518258,1.40172254815686,0.157265941855896,4.25917588948854,0,2.55089904122019,1.11542187833102,0,0,0,0,1.05802783107205,0,0.578063025868136,0,0.478901577171454,0.205116364240755,4.03314713954749,0.553258019713743,0.484426936895553,0,0,0,0,0,1.52552838186867,0,0,0.752103283492572,0,0,0,0.163771917510097,0,0.472763092328763,0,0.826747186004736,0.570742291745161,2.7348740450911,0,1.98484471355718,0.703484977438482,0.255524855279191,4.82131652290458,2.69026977775059,2.42786241694653,2.04895972216168,0,0.230467975111559,0,0.203909198930495,0.394636641377094,0.118193840883968,0.111231401892069,0.39246546425257,2.04250266890802,0,1.82631744101899,0,0,2.21577286947635,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0.335566295393377,0,0,0.647428837187895,0.718639647993729,3.4794432940146,0.971421986118279,0.701818390386317,0,0.237840181555137,0.11294608203896,0.329821550236287,0.301925687133347,0.540219106755613,0.437119121007915,0,0.735444965261716,0,0.785233868459781,0.297046400327086,0.4226557275834,0.509781344063451,0.375935671919414,0.837952543656503,0,0,0,0,0.730336388246517,0,0,0,0.475940431336403,2.18175345170189,1.5870805215462,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.303114792872958,0.267964130156178,0.829169439458779,0.413731983447581,0.426467963801962,0.714193294391221,0.0645889098360061,0.31037357147929,0.112131862580613,0.0636471582781649,0.404234377916439,0.653150243690884,1.36893320434112,0.26940821205835,0.215166616178029,1.99596213927608,0.162806537221949,0.106727345877715,1.9307228228694,0,2.34640942403454,0.366724332548599,0,0,0.805095174364105,0 | |||
|short_description=p6@RNF150 | |||
}} |
Revision as of 03:15, 22 January 2014
Short description: | p6@RNF150 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RNF150_5end |
Coexpression cluster: | C1935_heart_pineal_mature_neuroblastoma_putamen_neuroectodermal_occipital |
Association with transcript: | 38bp_to_ENST00000306799, NM_020724, uc003iio.1, uc003iip.1, uc010iok.1_5end |
EntrezGene: | RNF150 |
HGNC: | 23138 |
UniProt: | Q9ULK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.78e-09 | 6 |
sensory epithelial cell | 2.78e-09 | 6 |
olfactory epithelial cell | 2.78e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 5.82e-14 | 4 |
neuroendocrine gland | 5.82e-14 | 4 |
caudate-putamen | 1.69e-10 | 3 |
dorsal striatum | 1.69e-10 | 3 |
ectoderm-derived structure | 4.13e-09 | 171 |
ectoderm | 4.13e-09 | 171 |
presumptive ectoderm | 4.13e-09 | 171 |
pineal body | 4.51e-08 | 2 |
regional part of epithalamus | 4.51e-08 | 2 |
secretory circumventricular organ | 4.51e-08 | 2 |
circumventricular organ | 4.51e-08 | 2 |
epithalamus | 4.51e-08 | 2 |
diencephalon | 5.63e-08 | 7 |
future diencephalon | 5.63e-08 | 7 |
corpus striatum | 5.66e-08 | 4 |
striatum | 5.66e-08 | 4 |
ventral part of telencephalon | 5.66e-08 | 4 |
future corpus striatum | 5.66e-08 | 4 |
neurectoderm | 1.06e-07 | 86 |
caudate nucleus | 1.28e-07 | 2 |
future caudate nucleus | 1.28e-07 | 2 |
pituitary gland | 1.41e-07 | 2 |
regional part of forebrain | 2.80e-07 | 41 |
forebrain | 2.80e-07 | 41 |
anterior neural tube | 2.80e-07 | 41 |
future forebrain | 2.80e-07 | 41 |
structure with developmental contribution from neural crest | 3.01e-07 | 132 |
primary circulatory organ | 5.40e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.96e-08 | 2 |