FFCP PHASE1:Mm9::chr14:75579610..75579615,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=233|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:75579610..75579615,+|id=chr14:75579610..75579615,+|ontology_enrichment_celltype=CL:0000838!5.04e-08!12;CL:0000542!3.15e-07!13;CL:0000051!3.15e-07!13;CL:0000084!5.71e-07!11;CL:0000827!5.71e-07!11|ontology_enrichment_celltype_v019_2=CL:0000893,7.99e-07,6;CL:0002489,7.99e-07,6;CL:0000898,7.99e-07,6;CL:0000809,7.99e-07,6;CL:0000810,7.99e-07,6;CL:0000895,7.99e-07,6;CL:0000808,7.99e-07,6;CL:0000894,7.99e-07,6;CL:0000806,7.99e-07,6;CL:0000807,7.99e-07,6;CL:0000805,7.99e-07,6;CL:0002425,7.99e-07,6;CL:0002436,7.99e-07,6;CL:0002427,7.99e-07,6;CL:0002428,7.99e-07,6;CL:0002429,7.99e-07,6;CL:0002433,7.99e-07,6;CL:0002431,7.99e-07,6;CL:0002432,7.99e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.86e-12,3;DOID:4045,1.86e-12,3|ontology_enrichment_uberon=UBERON:0004177!1.18e-14!29;UBERON:0002193!5.80e-13!48;UBERON:0002390!6.98e-13!45;UBERON:0003061!6.98e-13!45;UBERON:0003408!4.46e-12!24;UBERON:0006562!8.05e-12!24;UBERON:0001557!8.05e-12!24;UBERON:0001042!8.05e-12!24;UBERON:0008814!8.05e-12!24;UBERON:0009145!8.05e-12!24;UBERON:0002370!4.63e-11!23;UBERON:0000974!4.63e-11!23;UBERON:0004807!4.63e-11!23;UBERON:0005058!4.63e-11!23;UBERON:0003351!4.63e-11!23;UBERON:0009113!4.63e-11!23;UBERON:0003295!4.63e-11!23;UBERON:0009722!4.63e-11!23;UBERON:0005562!4.63e-11!23;UBERON:0007690!4.63e-11!23;UBERON:0001004!1.63e-10!42;UBERON:0000072!6.03e-10!27;UBERON:0000065!1.09e-09!41;UBERON:0003081!1.02e-07!88;UBERON:0002405!1.03e-07!70;UBERON:0005057!4.33e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.48e-10,1;UBERON:0001097,2.48e-10,1;UBERON:0003968,2.48e-10,1;UBERON:0001467,2.48e-10,1|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,3.23814060948833,2.80877431586392,0.68487187290202,0.8774937489487,0,0.0874204024189974,0,0.202475267389826,0,1.89277299214943,0.959801035240171,0.42438965179803,0,0.496454756004426,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92972141515835,1.5626706890476,0,5.29408339227913,2.73218193983378,3.39857247121808,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0,3.36619248741323,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0,0,0.690739927463582,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.42366414172764,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0,0.370389054739423,0.376736914009382,0.410082683163076,0.228778173206523,0.509935289981566,0.69975726161829,0.552799895217695,0,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.360586348559907,0.443068581523732,0.403865799792591,0.0762068066549998,0.403304740547362,0.584747284438515,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.231768651889711,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0.409231043169689,0,0.385813221962283,0,0,0,0,0,0|short_description=p@chr14:75579610..75579615,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:75579610..75579615,+ | |||
|description=CAGE_peak_at_chr14:75579610..75579615,+ | |||
|id=chr14:75579610..75579615,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.04e-08!12;CL:0000542!3.15e-07!13;CL:0000051!3.15e-07!13;CL:0000084!5.71e-07!11;CL:0000827!5.71e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,7.99e-07,6;CL:0002489,7.99e-07,6;CL:0000898,7.99e-07,6;CL:0000809,7.99e-07,6;CL:0000810,7.99e-07,6;CL:0000895,7.99e-07,6;CL:0000808,7.99e-07,6;CL:0000894,7.99e-07,6;CL:0000806,7.99e-07,6;CL:0000807,7.99e-07,6;CL:0000805,7.99e-07,6;CL:0002425,7.99e-07,6;CL:0002436,7.99e-07,6;CL:0002427,7.99e-07,6;CL:0002428,7.99e-07,6;CL:0002429,7.99e-07,6;CL:0002433,7.99e-07,6;CL:0002431,7.99e-07,6;CL:0002432,7.99e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.86e-12,3;DOID:4045,1.86e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.18e-14!29;UBERON:0002193!5.80e-13!48;UBERON:0002390!6.98e-13!45;UBERON:0003061!6.98e-13!45;UBERON:0003408!4.46e-12!24;UBERON:0006562!8.05e-12!24;UBERON:0001557!8.05e-12!24;UBERON:0001042!8.05e-12!24;UBERON:0008814!8.05e-12!24;UBERON:0009145!8.05e-12!24;UBERON:0002370!4.63e-11!23;UBERON:0000974!4.63e-11!23;UBERON:0004807!4.63e-11!23;UBERON:0005058!4.63e-11!23;UBERON:0003351!4.63e-11!23;UBERON:0009113!4.63e-11!23;UBERON:0003295!4.63e-11!23;UBERON:0009722!4.63e-11!23;UBERON:0005562!4.63e-11!23;UBERON:0007690!4.63e-11!23;UBERON:0001004!1.63e-10!42;UBERON:0000072!6.03e-10!27;UBERON:0000065!1.09e-09!41;UBERON:0003081!1.02e-07!88;UBERON:0002405!1.03e-07!70;UBERON:0005057!4.33e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.48e-10,1;UBERON:0001097,2.48e-10,1;UBERON:0003968,2.48e-10,1;UBERON:0001467,2.48e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,3.23814060948833,2.80877431586392,0.68487187290202,0.8774937489487,0,0.0874204024189974,0,0.202475267389826,0,1.89277299214943,0.959801035240171,0.42438965179803,0,0.496454756004426,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92972141515835,1.5626706890476,0,5.29408339227913,2.73218193983378,3.39857247121808,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0,3.36619248741323,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0,0,0.690739927463582,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.42366414172764,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0,0.370389054739423,0.376736914009382,0.410082683163076,0.228778173206523,0.509935289981566,0.69975726161829,0.552799895217695,0,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.360586348559907,0.443068581523732,0.403865799792591,0.0762068066549998,0.403304740547362,0.584747284438515,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.231768651889711,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0.409231043169689,0,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p@chr14:75579610..75579615,+ | |||
}} |
Latest revision as of 19:46, 4 August 2015
Short description: | p@chr14:75579610..75579615, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:75579610..75579615, + |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 7.99e-07 | 6 |
double negative thymocyte | 7.99e-07 | 6 |
naive T cell | 7.99e-07 | 6 |
double-positive, alpha-beta thymocyte | 7.99e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 7.99e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 7.99e-07 | 6 |
DN4 thymocyte | 7.99e-07 | 6 |
DN1 thymic pro-T cell | 7.99e-07 | 6 |
DN2 thymocyte | 7.99e-07 | 6 |
DN3 thymocyte | 7.99e-07 | 6 |
immature single positive thymocyte | 7.99e-07 | 6 |
early T lineage precursor | 7.99e-07 | 6 |
mature CD4 single-positive thymocyte | 7.99e-07 | 6 |
resting double-positive thymocyte | 7.99e-07 | 6 |
double-positive blast | 7.99e-07 | 6 |
CD69-positive double-positive thymocyte | 7.99e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 7.99e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 7.99e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 7.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.48e-10 | 1 |
axillary lymph node | 2.48e-10 | 1 |
peripheral lymph node | 2.48e-10 | 1 |
shoulder | 2.48e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.86e-12 | 3 |
muscle cancer | 1.86e-12 | 3 |