FFCP PHASE1:Hg19::chr4:170897045..170897084,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506085 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000508313,NR_037878,uc003ism.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_LOC100506085_5end | |||
|id=chr4:170897045..170897084,- | |||
|ontology_enrichment_celltype=CL:0002586!1.22e-07!3;CL:0000181!6.54e-07!12;CL:0000417!6.54e-07!12;CL:0000668!6.54e-07!12;CL:0000414!6.54e-07!12;CL:0000412!6.54e-07!12;CL:0000182!6.54e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.31e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.34e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.52e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!2.20e-15!3;UBERON:0005290!2.20e-15!3;UBERON:0010096!2.20e-15!3;UBERON:0003296!9.21e-12!4;UBERON:0010133!9.21e-12!4;UBERON:0001905!4.75e-11!2;UBERON:0002757!4.75e-11!2;UBERON:0010134!4.75e-11!2;UBERON:0002784!4.75e-11!2;UBERON:0005408!4.75e-11!2;UBERON:0001899!4.75e-11!2;UBERON:0007023!4.93e-11!115;UBERON:0005743!9.42e-11!86;UBERON:0000966!9.02e-10!5;UBERON:0005388!9.02e-10!5;UBERON:0001802!9.02e-10!5;UBERON:0000073!1.94e-09!94;UBERON:0001016!1.94e-09!94;UBERON:0003075!4.37e-08!86;UBERON:0007284!4.37e-08!86;UBERON:0002368!5.49e-08!35;UBERON:0003076!5.95e-08!15;UBERON:0003057!5.95e-08!15;UBERON:0001781!1.22e-07!3;UBERON:0001782!1.22e-07!3;UBERON:0005424!1.22e-07!3;UBERON:0002346!1.32e-07!90;UBERON:0002240!2.13e-07!3;UBERON:0001017!3.89e-07!82;UBERON:0001894!6.59e-07!7;UBERON:0006222!6.59e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.11e-14;1!UBERON:0002107;1.69e-11;19!UBERON:0006925;1.69e-11;19!UBERON:0002423;8.51e-09;25!UBERON:0002368;1.33e-08;33!UBERON:0000949;4.99e-08;43!UBERON:0001905;8.89e-08;2!UBERON:0002757;8.89e-08;2!UBERON:0010134;8.89e-08;2!UBERON:0005408;8.89e-08;2!UBERON:0001899;8.89e-08;2!UBERON:0002365;2.31e-07;31!UBERON:0002330;2.31e-07;31!UBERON:0005172;3.83e-07;52!UBERON:0005173;3.83e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.84e-14,1;UBERON:0005172,1.70e-11,54;UBERON:0005173,1.70e-11,54;UBERON:0002107,1.71e-11,19;UBERON:0006925,1.71e-11,19;UBERON:0008836,1.71e-11,19;UBERON:0002417,2.73e-10,60;UBERON:0000916,2.73e-10,60;UBERON:0008835,5.84e-10,22;UBERON:0003894,5.84e-10,22;UBERON:0009854,1.55e-09,23;UBERON:0002368,2.00e-09,35;UBERON:0007499,8.60e-09,25;UBERON:0009497,8.60e-09,25;UBERON:0000015,8.60e-09,25;UBERON:0002423,8.60e-09,25;UBERON:0006235,8.60e-09,25;UBERON:0004161,8.60e-09,25;UBERON:0009856,1.84e-08,26;UBERON:0001905,9.19e-08,2;UBERON:0002757,9.19e-08,2;UBERON:0010134,9.19e-08,2;UBERON:0005408,9.19e-08,2;UBERON:0001899,9.19e-08,2;UBERON:0000949,2.59e-07,45;UBERON:0002365,3.96e-07,31;UBERON:0002330,3.96e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47094550068939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,1.96565443335525,21.859226547212,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0.650756789328606,13.9105365724425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2868775343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0,0,3.84167259326905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,11.9784675094781,2.09818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,9.08623848804111,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29363678276028,0.887432412294818,0.0620964029413835,10.9295421599622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,1.00885116665647,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,10.6500050823218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.437119121007915,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC100506085 | |||
}} |
Revision as of 03:58, 22 January 2014
Short description: | p1@LOC100506085 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100506085_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000508313, NR_037878, uc003ism.1_5end |
EntrezGene: | LOC100506085 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.34e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.84e-14 | 1 |
abdomen element | 1.70e-11 | 54 |
abdominal segment element | 1.70e-11 | 54 |
liver | 1.71e-11 | 19 |
digestive gland | 1.71e-11 | 19 |
liver bud | 1.71e-11 | 19 |
abdominal segment of trunk | 2.73e-10 | 60 |
abdomen | 2.73e-10 | 60 |
hepatic diverticulum | 5.84e-10 | 22 |
liver primordium | 5.84e-10 | 22 |
digestive tract diverticulum | 1.55e-09 | 23 |
endocrine gland | 2.00e-09 | 35 |
epithelial sac | 8.60e-09 | 25 |
epithelium of foregut-midgut junction | 8.60e-09 | 25 |
anatomical boundary | 8.60e-09 | 25 |
hepatobiliary system | 8.60e-09 | 25 |
foregut-midgut junction | 8.60e-09 | 25 |
septum transversum | 8.60e-09 | 25 |
sac | 1.84e-08 | 26 |
pineal body | 9.19e-08 | 2 |
regional part of epithalamus | 9.19e-08 | 2 |
secretory circumventricular organ | 9.19e-08 | 2 |
circumventricular organ | 9.19e-08 | 2 |
epithalamus | 9.19e-08 | 2 |
endocrine system | 2.59e-07 | 45 |
exocrine gland | 3.96e-07 | 31 |
exocrine system | 3.96e-07 | 31 |