FFCP PHASE1:Mm9::chr15:35984598..35984624,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=77|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:35984598..35984624,-|id=chr15:35984598..35984624,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,3.46e-14,9;CL:0002251,3.46e-14,9;CL:0002250,3.60e-11,3;CL:0002076,1.21e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004176!2.19e-14!17;UBERON:0009196!2.19e-14!17;UBERON:0009117!2.19e-14!17;UBERON:0000473!2.78e-14!14;UBERON:0000991!1.68e-13!18;UBERON:0005564!1.68e-13!18;UBERON:0003135!3.02e-13!15;UBERON:0003101!2.43e-12!16;UBERON:0000079!2.43e-12!16;UBERON:0003133!9.61e-10!24;UBERON:0005156!7.07e-09!26;UBERON:0000990!7.07e-09!26;UBERON:0001155!1.25e-07!2;UBERON:0000059!1.25e-07!2;UBERON:0000344!1.62e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.66e-15,14;UBERON:0003350,3.46e-14,9;UBERON:0004808,3.46e-14,9;UBERON:0001277,3.46e-14,9;UBERON:0003135,9.16e-14,15;UBERON:0003101,6.57e-13,16;UBERON:0000079,6.57e-13,16;UBERON:0004176,3.74e-12,17;UBERON:0009196,3.74e-12,17;UBERON:0009117,3.74e-12,17;UBERON:0000485,1.13e-11,11;UBERON:0000991,1.76e-11,18;UBERON:0005564,1.76e-11,18;UBERON:0001242,6.30e-10,13;UBERON:0001262,6.30e-10,13;UBERON:0004786,6.30e-10,13;UBERON:0001153,2.09e-09,1;UBERON:0001045,2.09e-09,1;UBERON:0000344,1.21e-08,15;UBERON:0003133,1.29e-08,24;UBERON:0005156,5.97e-08,26;UBERON:0000990,5.97e-08,26|phase1_expression=0,0,0,0,0,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,1.1554064790051,0,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919218786610021,0,0.383062014255563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81846469342095,0.149516546043979,0,0,0.129159823477731,0,0.352071715937262,6.11960608766566,11.2199498535511,3.14059357073808,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:35984598..35984624,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=77 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:35984598..35984624,- | |||
|description=CAGE_peak_at_chr15:35984598..35984624,- | |||
|id=chr15:35984598..35984624,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.46e-14,9;CL:0002251,3.46e-14,9;CL:0002250,3.60e-11,3;CL:0002076,1.21e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004176!2.19e-14!17;UBERON:0009196!2.19e-14!17;UBERON:0009117!2.19e-14!17;UBERON:0000473!2.78e-14!14;UBERON:0000991!1.68e-13!18;UBERON:0005564!1.68e-13!18;UBERON:0003135!3.02e-13!15;UBERON:0003101!2.43e-12!16;UBERON:0000079!2.43e-12!16;UBERON:0003133!9.61e-10!24;UBERON:0005156!7.07e-09!26;UBERON:0000990!7.07e-09!26;UBERON:0001155!1.25e-07!2;UBERON:0000059!1.25e-07!2;UBERON:0000344!1.62e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.66e-15,14;UBERON:0003350,3.46e-14,9;UBERON:0004808,3.46e-14,9;UBERON:0001277,3.46e-14,9;UBERON:0003135,9.16e-14,15;UBERON:0003101,6.57e-13,16;UBERON:0000079,6.57e-13,16;UBERON:0004176,3.74e-12,17;UBERON:0009196,3.74e-12,17;UBERON:0009117,3.74e-12,17;UBERON:0000485,1.13e-11,11;UBERON:0000991,1.76e-11,18;UBERON:0005564,1.76e-11,18;UBERON:0001242,6.30e-10,13;UBERON:0001262,6.30e-10,13;UBERON:0004786,6.30e-10,13;UBERON:0001153,2.09e-09,1;UBERON:0001045,2.09e-09,1;UBERON:0000344,1.21e-08,15;UBERON:0003133,1.29e-08,24;UBERON:0005156,5.97e-08,26;UBERON:0000990,5.97e-08,26 | |||
|phase1_expression=0,0,0,0,0,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,1.1554064790051,0,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919218786610021,0,0.383062014255563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81846469342095,0.149516546043979,0,0,0.129159823477731,0,0.352071715937262,6.11960608766566,11.2199498535511,3.14059357073808,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:35984598..35984624,- | |||
}} |
Latest revision as of 05:05, 5 August 2015
Short description: | p@chr15:35984598..35984624, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:35984598..35984624, - |
Coexpression cluster: | MCL_coexpression_mm9:77 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.46e-14 | 9 |
epithelial cell of alimentary canal | 3.46e-14 | 9 |
intestinal crypt stem cell | 3.60e-11 | 3 |
endo-epithelial cell | 1.21e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
testis | 9.66e-15 | 14 |
epithelium of mucosa | 3.46e-14 | 9 |
gastrointestinal system epithelium | 3.46e-14 | 9 |
intestinal epithelium | 3.46e-14 | 9 |
male reproductive organ | 9.16e-14 | 15 |
male organism | 6.57e-13 | 16 |
male reproductive system | 6.57e-13 | 16 |
external genitalia | 3.74e-12 | 17 |
indifferent external genitalia | 3.74e-12 | 17 |
indifferent gonad | 3.74e-12 | 17 |
simple columnar epithelium | 1.13e-11 | 11 |
gonad | 1.76e-11 | 18 |
gonad primordium | 1.76e-11 | 18 |
intestinal mucosa | 6.30e-10 | 13 |
wall of intestine | 6.30e-10 | 13 |
gastrointestinal system mucosa | 6.30e-10 | 13 |
caecum | 2.09e-09 | 1 |
midgut | 2.09e-09 | 1 |
mucosa | 1.21e-08 | 15 |
reproductive organ | 1.29e-08 | 24 |
reproductive structure | 5.97e-08 | 26 |
reproductive system | 5.97e-08 | 26 |