FFCP PHASE1:Hg19::chr4:25656920..25656927,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=10568 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11020 | |||
|TSSclassifier=strong | |||
|UniProt=D6RA94 | |||
|association_with_transcript=0bp_to_ENST00000513204_5end | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_8_at_SLC34A2_5end | |||
|id=chr4:25656920..25656927,+ | |||
|ontology_enrichment_celltype=CL:0000128!9.80e-11!7;CL:0000126!9.80e-11!7;CL:0000127!9.80e-11!7;CL:0002453!9.80e-11!7;CL:0002605!4.05e-07!3;CL:0002603!4.86e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.69e-21;2!CL:0001016;5.69e-21;2!CL:0000453;3.22e-09;5!CL:0002188;3.22e-09;5!CL:0000840;6.78e-08;5!CL:1000746;6.04e-07;7!CL:1000612;6.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,6.96e-21,2;CL:0001016,6.96e-21,2;CL:0002188,3.22e-09,5;CL:0000453,3.49e-09,5;CL:0000840,7.25e-08,5;CL:0001029,7.25e-08,5;CL:1000746,6.04e-07,7;CL:1000612,6.04e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0005754;6.62e-41;1!UBERON:0007297;3.11e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!7.53e-15!3;UBERON:0004054!7.53e-15!3;UBERON:0005904!2.97e-11!4;UBERON:0003127!1.84e-10!2;UBERON:0001829!1.84e-10!2;UBERON:0007023!1.71e-08!115;UBERON:0004175!5.52e-08!25;UBERON:0000464!1.50e-07!104;UBERON:0001044!1.96e-07!6;UBERON:0003293!1.96e-07!6;UBERON:0003294!1.96e-07!6;UBERON:0010047!1.96e-07!6;UBERON:0000167!1.96e-07!6;UBERON:0002113!2.61e-07!27;UBERON:0003918!2.61e-07!27;UBERON:0005095!2.61e-07!27;UBERON:0007687!2.61e-07!27;UBERON:0003135!6.50e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.28e-53;3!UBERON:0004054;1.28e-53;3!UBERON:0000998;6.62e-41;1!UBERON:0006868;6.62e-41;1!UBERON:0001000;9.91e-41;1!UBERON:0005352;9.91e-41;1!UBERON:0005904;1.48e-40;4!UBERON:0000058;5.90e-17;10!UBERON:0003135;1.62e-15;11!UBERON:0002346;3.42e-11;4!UBERON:0000923;3.42e-11;4!UBERON:0010316;3.42e-11;4!UBERON:0005291;3.42e-11;4!UBERON:0002050;3.22e-09;5!UBERON:0005423;3.22e-09;5!UBERON:0004175;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0000074;6.04e-07;7!UBERON:0001229;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.28e-53,3;UBERON:0004054,1.28e-53,3;UBERON:0000998,6.62e-41,1;UBERON:0006868,6.62e-41,1;UBERON:0001000,9.91e-41,1;UBERON:0005352,9.91e-41,1;UBERON:0005904,1.48e-40,4;UBERON:0000058,1.39e-19,19;UBERON:0000080,1.24e-18,9;UBERON:0002120,1.24e-18,9;UBERON:0004875,1.24e-18,9;UBERON:0005721,1.24e-18,9;UBERON:0005754,1.24e-18,9;UBERON:0007297,1.24e-18,9;UBERON:0003135,1.62e-15,11;UBERON:0004876,1.88e-15,11;UBERON:0003887,2.94e-14,12;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0004175,2.14e-07,25;UBERON:0002113,4.02e-07,26;UBERON:0003918,4.02e-07,26;UBERON:0011143,4.02e-07,26;UBERON:0005095,4.02e-07,26;UBERON:0007687,4.02e-07,26;UBERON:0010532,6.04e-07,7;UBERON:0000074,6.04e-07,7;UBERON:0001229,6.04e-07,7;UBERON:0001230,6.04e-07,7;UBERON:0003220,6.04e-07,7;UBERON:0005749,6.04e-07,7;UBERON:0004199,6.04e-07,7;UBERON:0004209,6.04e-07,7;UBERON:0004198,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0.572471974262113,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31335044559025,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.349843349309,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52759276958623,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0,0,8.46774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.404112318087525,0.358611026963382,0.99798106963804,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p8@SLC34A2 | |||
}} |
Revision as of 00:32, 22 January 2014
Short description: | p8@SLC34A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SLC34A2_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 0bp_to_ENST00000513204_5end |
EntrezGene: | SLC34A2 |
HGNC: | 11020 |
UniProt: | D6RA94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 6.96e-21 | 2 |
immature CD1a-positive Langerhans cell | 6.96e-21 | 2 |
glomerular endothelial cell | 3.22e-09 | 5 |
Langerhans cell | 3.49e-09 | 5 |
immature conventional dendritic cell | 7.25e-08 | 5 |
common dendritic progenitor | 7.25e-08 | 5 |
glomerular cell | 6.04e-07 | 7 |
kidney corpuscule cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.28e-53 | 3 |
internal male genitalia | 1.28e-53 | 3 |
seminal vesicle | 6.62e-41 | 1 |
seminal fluid secreting gland | 6.62e-41 | 1 |
vas deferens | 9.91e-41 | 1 |
spermatic cord | 9.91e-41 | 1 |
duct of male reproductive system | 1.48e-40 | 4 |
duct | 1.39e-19 | 19 |
mesonephros | 1.24e-18 | 9 |
pronephros | 1.24e-18 | 9 |
nephrogenic cord | 1.24e-18 | 9 |
pronephric mesoderm | 1.24e-18 | 9 |
rostral part of nephrogenic cord | 1.24e-18 | 9 |
presumptive pronephric mesoderm | 1.24e-18 | 9 |
male reproductive organ | 1.62e-15 | 11 |
urogenital ridge | 1.88e-15 | 11 |
intraembryonic coelom | 2.94e-14 | 12 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
internal genitalia | 2.14e-07 | 25 |
kidney | 4.02e-07 | 26 |
kidney mesenchyme | 4.02e-07 | 26 |
upper urinary tract | 4.02e-07 | 26 |
kidney rudiment | 4.02e-07 | 26 |
kidney field | 4.02e-07 | 26 |
primitive nephron | 6.04e-07 | 7 |
renal glomerulus | 6.04e-07 | 7 |
renal corpuscle | 6.04e-07 | 7 |
glomerular capsule | 6.04e-07 | 7 |
metanephric mesenchyme | 6.04e-07 | 7 |
glomerular tuft | 6.04e-07 | 7 |
S-shaped body | 6.04e-07 | 7 |
renal vesicle | 6.04e-07 | 7 |
comma-shaped body | 6.04e-07 | 7 |