FFCP PHASE1:Mm9::chr15:57966556..57966567,-: Difference between revisions
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{{FFCP|EntrezGene=70472|HGNC=|UniProt=G3X963,Q6IQY4,Q8CDM1|association_with_transcript=69bp_to_ENSMUST00000038194,NM_027435,uc007vtf.1,uc007vth.1_5end|description=CAGE_peak_3_at_Atad2_5end|id=chr15:57966556..57966567,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,2.73e-07,32;CL:0002032,2.73e-07,32;CL:0000037,2.73e-07,32;CL:0000837,2.73e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.16e-08!45;UBERON:0003061!3.16e-08!45;UBERON:0002193!8.84e-08!48;UBERON:0004177!4.99e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.42e-10,45;UBERON:0003061,4.42e-10,45;UBERON:0002193,1.47e-09,48;UBERON:0002405,1.47e-09,48;UBERON:0004177,9.90e-09,29;UBERON:0005057,9.90e-09,29|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,1.00727563147134,1.63528848416868,4.51931632045517,0.563154888606667,1.17032263160997,0.171217968225505,0.8774937489487,2.05440875917447,4.54586092578786,2.33176833270964,2.42970320867791,0.699561878128147,2.99689057090326,3.01651753932625,1.69755860719212,0.425216450755349,4.17021995043718,1.82839852397255,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0.760093677825496,0,0.665191531965914,1.27006134691926,4.30545351309199,0,1.1554064790051,0.664938581433969,0.816677425049476,2.51118978442145,3.1253413780952,4.18818995179039,0.588231488031014,1.36609096991689,1.45653105909346,0.629484089877886,0.304130793658544,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,1.43752564364972,1.51004345451963,4.35217285206807,7.05796978199174,0.514518872071894,0.573066879877513,0.515672092277442,0.404632921719196,0.528990979272033,0,0,0,2.2497492932035,0.988866362566974,0.7104801149461,0,0,0.207379224616955,0.135005938331691,0.630974884054146,0,0.220868540951614,0.122490799214954,0.479227355091182,0,0,0.127687338085188,0.307213066512487,0,0.365950574409639,0.52091337055676,0.558365998002762,0,0,0,0.427115042397309,0.186399445825301,0.302904773332736,1.20914496170857,0.579728977403356,0,0,0,0,0,0.842666520790511,1.36344258062446,0.779358013808606,0.70667914902068,0.14084341977668,0,0,0,0.865964164044856,1.01343946190039,1.01104889002957,0.22836775943812,2.58937883647172,0.148442139064825,1.73485326766136,1.21786191324856,1.15307748628029,1.50722640552623,0.823120949949934,0.376999773989026,0,0.289198713839823,5.30766331169925,2.10296904931632,1.10420759230197,0.969750506270444,0,0,1.04723353406728,0,3.59445373517761,2.99951365496704,3.81210681219194,0.149790639404823,0.457500602818626,0.125654352112864,0.173824320192276,0.767146371990992,0,0.162241263067758,1.01839363850316,1.11966273549084,0,0.210441855886474,1.69156575851515,0,1.26043490863744,1.05493372485001,1.42876648217788,1.15302348256365,1.03071897015702,0.258703370739016,1.94011193639558,0.378212160335639,1.75951124163949,0.43839146485515,0.834141747676794,1.0447564995665,0.823128545631774,0.796137067273973,2.1066395619397,3.08817488537658,1.70498099637356,0.828503090142008,0.938104239924385,0.900310307305074,1.65721314909647,1.37734962223183,1.23413690309903,2.09280550275367,0.804820204198858,0.700592054203017,1.97471819896177,0.985004784474571,0.648550476366846,0,1.3173006917463,0.671032093801859,0.210289948564127,0.514523061896422,0.660837565967596,0.528901133327089,1.06644125267617,2.32236671860439,2.06187938115349,0.403367049246685,1.11189021922435,1.33157938278791,0.949058123089023,0.164698954724011,0.502670417600539,0.596869416123452,1.36474860983384,0.898819408654221,0.432276099749388,0.398282546508734,0.758671603812327,2.17072173958485,2.25415471346161,1.62921062276251,0.775809948670503,1.05203729835478,0.632365371242573,0.590440591918409,0.31399745568275,0.123397163921801,0,1.83529616287703,2.16214894624523,1.34917267430912,1.21716072833102,1.4470629585145,1.2731292589071,0.287696137450811,0.810676133875177,0.549122826376163,2.87536413054709,1.11642284300551,0.624075346229121,0.505157755894224,0.358794827043824,0.482443521363367,0.554259570499814,1.32643988239339,1.46668478797823,2.8856664581782,1.87752198630802,1.84256883185997,0.476087281772027,0.780534591431195,2.67979744980525,0.8858587585951,1.2756381492599,1.14704320301017,1.20879487306127,0.289298117163023,0,4.35124547054968,0.983528546038072,0.551873492609465,0,0,0.491804836130026,0.504941854408746,0.631016438832513,1.95219372148319,1.93881057959519,0.955875191810208,0.445597348164788,1.69845918473299,1.61924280669958,1.75353514746787,0.395287777946524,0,0.851640511249612,1.24645922567079,1.14020871547503,0.329940245945071,0,0.728341908464944,0.604647113929502,1.50884063804718,0,0.307435147943927,0.775284879504663,2.18120237686503,1.42598951353889,0.316036757935816,0,1.03135543248187,0.340439605753788,0.900305470156551,0.646793418913773,1.50035924522115,0.709360934569094,0.713475270408282,0.493647061806363,0.913394847343798,0.469343416127421,0.63549621259146,0,0.65954501176592,1.13025098687134,1.86970067277283,0.477489376012546,1.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70472 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3X963,uniprot:Q6IQY4,uniprot:Q8CDM1 | |||
|association_with_transcript=69bp_to_ENSMUST00000038194,NM_027435,uc007vtf.1,uc007vth.1_5end | |||
|cluster_id=chr15:57966556..57966567,- | |||
|description=CAGE_peak_3_at_Atad2_5end | |||
|id=chr15:57966556..57966567,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.73e-07,32;CL:0002032,2.73e-07,32;CL:0000037,2.73e-07,32;CL:0000837,2.73e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.16e-08!45;UBERON:0003061!3.16e-08!45;UBERON:0002193!8.84e-08!48;UBERON:0004177!4.99e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.42e-10,45;UBERON:0003061,4.42e-10,45;UBERON:0002193,1.47e-09,48;UBERON:0002405,1.47e-09,48;UBERON:0004177,9.90e-09,29;UBERON:0005057,9.90e-09,29 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,1.00727563147134,1.63528848416868,4.51931632045517,0.563154888606667,1.17032263160997,0.171217968225505,0.8774937489487,2.05440875917447,4.54586092578786,2.33176833270964,2.42970320867791,0.699561878128147,2.99689057090326,3.01651753932625,1.69755860719212,0.425216450755349,4.17021995043718,1.82839852397255,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0.760093677825496,0,0.665191531965914,1.27006134691926,4.30545351309199,0,1.1554064790051,0.664938581433969,0.816677425049476,2.51118978442145,3.1253413780952,4.18818995179039,0.588231488031014,1.36609096991689,1.45653105909346,0.629484089877886,0.304130793658544,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,1.43752564364972,1.51004345451963,4.35217285206807,7.05796978199174,0.514518872071894,0.573066879877513,0.515672092277442,0.404632921719196,0.528990979272033,0,0,0,2.2497492932035,0.988866362566974,0.7104801149461,0,0,0.207379224616955,0.135005938331691,0.630974884054146,0,0.220868540951614,0.122490799214954,0.479227355091182,0,0,0.127687338085188,0.307213066512487,0,0.365950574409639,0.52091337055676,0.558365998002762,0,0,0,0.427115042397309,0.186399445825301,0.302904773332736,1.20914496170857,0.579728977403356,0,0,0,0,0,0.842666520790511,1.36344258062446,0.779358013808606,0.70667914902068,0.14084341977668,0,0,0,0.865964164044856,1.01343946190039,1.01104889002957,0.22836775943812,2.58937883647172,0.148442139064825,1.73485326766136,1.21786191324856,1.15307748628029,1.50722640552623,0.823120949949934,0.376999773989026,0,0.289198713839823,5.30766331169925,2.10296904931632,1.10420759230197,0.969750506270444,0,0,1.04723353406728,0,3.59445373517761,2.99951365496704,3.81210681219194,0.149790639404823,0.457500602818626,0.125654352112864,0.173824320192276,0.767146371990992,0,0.162241263067758,1.01839363850316,1.11966273549084,0,0.210441855886474,1.69156575851515,0,1.26043490863744,1.05493372485001,1.42876648217788,1.15302348256365,1.03071897015702,0.258703370739016,1.94011193639558,0.378212160335639,1.75951124163949,0.43839146485515,0.834141747676794,1.0447564995665,0.823128545631774,0.796137067273973,2.1066395619397,3.08817488537658,1.70498099637356,0.828503090142008,0.938104239924385,0.900310307305074,1.65721314909647,1.37734962223183,1.23413690309903,2.09280550275367,0.804820204198858,0.700592054203017,1.97471819896177,0.985004784474571,0.648550476366846,0,1.3173006917463,0.671032093801859,0.210289948564127,0.514523061896422,0.660837565967596,0.528901133327089,1.06644125267617,2.32236671860439,2.06187938115349,0.403367049246685,1.11189021922435,1.33157938278791,0.949058123089023,0.164698954724011,0.502670417600539,0.596869416123452,1.36474860983384,0.898819408654221,0.432276099749388,0.398282546508734,0.758671603812327,2.17072173958485,2.25415471346161,1.62921062276251,0.775809948670503,1.05203729835478,0.632365371242573,0.590440591918409,0.31399745568275,0.123397163921801,0,1.83529616287703,2.16214894624523,1.34917267430912,1.21716072833102,1.4470629585145,1.2731292589071,0.287696137450811,0.810676133875177,0.549122826376163,2.87536413054709,1.11642284300551,0.624075346229121,0.505157755894224,0.358794827043824,0.482443521363367,0.554259570499814,1.32643988239339,1.46668478797823,2.8856664581782,1.87752198630802,1.84256883185997,0.476087281772027,0.780534591431195,2.67979744980525,0.8858587585951,1.2756381492599,1.14704320301017,1.20879487306127,0.289298117163023,0,4.35124547054968,0.983528546038072,0.551873492609465,0,0,0.491804836130026,0.504941854408746,0.631016438832513,1.95219372148319,1.93881057959519,0.955875191810208,0.445597348164788,1.69845918473299,1.61924280669958,1.75353514746787,0.395287777946524,0,0.851640511249612,1.24645922567079,1.14020871547503,0.329940245945071,0,0.728341908464944,0.604647113929502,1.50884063804718,0,0.307435147943927,0.775284879504663,2.18120237686503,1.42598951353889,0.316036757935816,0,1.03135543248187,0.340439605753788,0.900305470156551,0.646793418913773,1.50035924522115,0.709360934569094,0.713475270408282,0.493647061806363,0.913394847343798,0.469343416127421,0.63549621259146,0,0.65954501176592,1.13025098687134,1.86970067277283,0.477489376012546,1.14898629821543,0.291480836629851,0.18542530201051,2.05045056957423,1.44470807574256,1.11116716421827,2.26042148405629,3.00727300986255,2.0590035588587,0.849892149969277,1.95932033253121,3.73139929271944,0,1.42351197111511,1.42323626988794,1.18805874903981,0.836353184057875,0.218362563746178,1.61837215661785,0.41326727862668,0.523511883968059,0.129614973291793,0,2.81846469342095,1.49516546043979,0.496375471371293,2.33341426012857,1.03327858782185,1.01373675294467,1.40828686374905,1.8228613878153,1.04859344425711,2.17425708743405,0.576060012515731,2.21207784439725,1.62180172232131,2.97861775777999,2.33857481360031,3.93858730468459,3.77494574084403,4.56742708175882,4.57837534241189,5.75508764704442,4.80102881926499,4.33552596088414,5.26272555994663,5.58028681513911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| |||
|short_description=p3@Atad2 | |||
}} |
Revision as of 07:52, 5 August 2015
Short description: | p3@Atad2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Atad2_5end |
Coexpression cluster: | NA |
Association with transcript: | 69bp_to_ENSMUST00000038194, NM_027435, uc007vtf.1, uc007vth.1_5end |
EntrezGene: | 70472 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.73e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.73e-07 | 32 |
hematopoietic stem cell | 2.73e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.73e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.42e-10 | 45 |
blood island | 4.42e-10 | 45 |
hemolymphoid system | 1.47e-09 | 48 |
immune system | 1.47e-09 | 48 |
hemopoietic organ | 9.90e-09 | 29 |
immune organ | 9.90e-09 | 29 |