FFCP PHASE1:Hg19::chr4:40194609..40194616,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |||
|TSSclassifier=strong | |||
|UniProt=D6R8Z1 | |||
|association_with_transcript=0bp_to_ENST00000508513_5end | |||
|coexpression_cluster_id=C1183 | |||
|description=CAGE_peak_23_at_RHOH_5end | |||
|id=chr4:40194609..40194616,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.03e-78!24;CL:0000826!1.03e-78!24;CL:0000542!3.49e-39!53;CL:0000051!3.49e-39!53;CL:0000838!4.79e-35!52;CL:0000236!7.80e-30!14;CL:0000785!8.98e-18!2;CL:0000955!8.98e-18!2;CL:0000818!8.98e-18!2;CL:0000954!8.98e-18!2;CL:0000816!8.98e-18!2;CL:0002087!8.15e-16!119;CL:0002031!4.23e-13!124;CL:0000738!4.74e-13!140;CL:0000817!3.56e-12!3;CL:0002032!1.14e-10!165;CL:0000837!1.14e-10!165;CL:0000037!4.00e-10!172;CL:0000566!4.00e-10!172;CL:0000819!8.24e-10!1;CL:0000946!1.07e-09!1;CL:0000786!1.07e-09!1;CL:0000980!1.07e-09!1;CL:0000988!2.03e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.34e-27;24!CL:0000236;3.32e-13;13!CL:0000542;5.38e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.78e-27,24;CL:0000826,6.78e-27,24;CL:0000838,7.71e-13,52;CL:0000542,1.31e-12,53;CL:0000051,1.31e-12,53;CL:0000236,2.51e-12,14 | |||
|ontology_enrichment_development_v019=CL:0000051;5.38e-10;53!UBERON:0004872;5.38e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!6.92e-22!10;DOID:630!5.79e-10!1;DOID:0050177!5.79e-10!1;DOID:0050427!5.79e-10!1;DOID:12603!7.55e-10!1;DOID:0060073!8.24e-10!1;DOID:8675!8.24e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.24e-36;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.05e-36,10;DOID:2531,8.40e-08,51;DOID:0060083,8.40e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!9.38e-13!3;UBERON:0004854!9.38e-13!3;UBERON:0009034!9.38e-13!3;UBERON:0002095!9.38e-13!3;UBERON:0004782!9.38e-13!3;UBERON:0003281!9.38e-13!3;UBERON:0009664!9.38e-13!3;UBERON:0002296!9.38e-13!3;UBERON:0005602!9.38e-13!3;UBERON:0001179!9.38e-13!3;UBERON:0006293!9.38e-13!3;UBERON:0004177!1.02e-11!7;UBERON:0001154!3.10e-10!1;UBERON:0001153!3.10e-10!1;UBERON:0002372!4.85e-10!1;UBERON:0001961!4.85e-10!1;UBERON:0001744!4.85e-10!1;UBERON:0001735!4.85e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.40e-14;3!UBERON:0004177;2.74e-09;5!UBERON:0005057;2.74e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.22e-14,3;UBERON:0004854,1.22e-14,3;UBERON:0009034,1.22e-14,3;UBERON:0002095,1.22e-14,3;UBERON:0004782,1.22e-14,3;UBERON:0003281,1.22e-14,3;UBERON:0009664,1.22e-14,3;UBERON:0002296,1.22e-14,3;UBERON:0005602,1.22e-14,3;UBERON:0001179,1.22e-14,3;UBERON:0006293,1.22e-14,3;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.328402357799783,0.472264687882075,0,0,0,0,0,0,1.16200800870452,2.27470771979874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,2.13365111283254,0.400395987036012,0,0,1.90810750907073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988058159489721,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,2.49852889812322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p23@RHOH | |||
}} |
Revision as of 00:47, 22 January 2014
Short description: | p23@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_RHOH_5end |
Coexpression cluster: | C1183_splenic_CD19_Burkitt_acute_xeroderma_B_appendix |
Association with transcript: | 0bp_to_ENST00000508513_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | D6R8Z1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.78e-27 | 24 |
pro-B cell | 6.78e-27 | 24 |
lymphoid lineage restricted progenitor cell | 7.71e-13 | 52 |
lymphocyte | 1.31e-12 | 53 |
common lymphoid progenitor | 1.31e-12 | 53 |
B cell | 2.51e-12 | 14 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.22e-14 | 3 |
gastrointestinal system mesentery | 1.22e-14 | 3 |
stomach region | 1.22e-14 | 3 |
mesentery | 1.22e-14 | 3 |
gastrointestinal system serosa | 1.22e-14 | 3 |
mesentery of stomach | 1.22e-14 | 3 |
gut mesentery | 1.22e-14 | 3 |
dorsal mesentery | 1.22e-14 | 3 |
dorsal mesogastrium | 1.22e-14 | 3 |
peritoneal cavity | 1.22e-14 | 3 |
spleen primordium | 1.22e-14 | 3 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.05e-36 | 10 |
hematologic cancer | 8.40e-08 | 51 |
immune system cancer | 8.40e-08 | 51 |