FFCP PHASE1:Hg19::chr4:40752184..40752240,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25857 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=203bp_to_ENST00000473399_5end | |||
|coexpression_cluster_id=C4412 | |||
|description=CAGE_peak_2_at_NSUN7_5end | |||
|id=chr4:40752184..40752240,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.96e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.34e-09;5!CL:0000039;3.74e-08;7!CL:0000586;3.74e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.30e-12,253;CL:0002322,3.65e-09,5;CL:0000039,4.64e-08,7;CL:0000586,4.64e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.39e-08;10!UBERON:0005564;7.39e-08;10 | |||
|ontology_enrichment_disease=DOID:305!7.25e-13!106;DOID:0050687!1.88e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.35e-10;22!DOID:2994;3.35e-10;22!DOID:305;9.05e-09;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.84e-21,143;DOID:305,4.30e-20,106;DOID:3095,2.66e-10,22;DOID:2994,2.66e-10,22;DOID:162,2.47e-09,235;DOID:14566,8.36e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0000064!1.80e-09!219;UBERON:0007023!3.08e-08!115;UBERON:0000464!5.68e-08!104;UBERON:0000062!1.35e-07!511;UBERON:0003075!2.55e-07!86;UBERON:0007284!2.55e-07!86;UBERON:0004121!2.86e-07!169;UBERON:0004119!3.62e-07!169;UBERON:0000925!3.62e-07!169;UBERON:0006595!3.62e-07!169;UBERON:0000922!3.78e-07!612;UBERON:0000063!3.92e-07!97;UBERON:0003135!8.02e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.28e-09;8!UBERON:0000160;1.58e-09;17!UBERON:0003135;3.03e-08;11!UBERON:0005409;4.31e-08;22!UBERON:0000059;7.08e-08;11!UBERON:0004907;7.63e-08;5!UBERON:0000922;4.16e-07;49!UBERON:0001052;5.34e-07;4!UBERON:0007625;9.85e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.28e-09,8;UBERON:0000160,1.74e-09,17;UBERON:0003135,3.60e-08,11;UBERON:0000059,7.85e-08,11;UBERON:0004907,1.10e-07,5;UBERON:0007625,5.41e-07,11;UBERON:0001052,5.53e-07,4;UBERON:0005409,9.25e-07,25 | |||
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| |||
|short_description=p2@NSUN7 | |||
}} |
Revision as of 00:50, 22 January 2014
Short description: | p2@NSUN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NSUN7_5end |
Coexpression cluster: | C4412_argyrophil_rectum_testis_testicular_iPS_choriocarcinoma_small |
Association with transcript: | 203bp_to_ENST00000473399_5end |
EntrezGene: | NSUN7 |
HGNC: | 25857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.30e-12 | 253 |
embryonic stem cell | 3.65e-09 | 5 |
germ line cell | 4.64e-08 | 7 |
germ cell | 4.64e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.28e-09 | 8 |
intestine | 1.74e-09 | 17 |
male reproductive organ | 3.60e-08 | 11 |
large intestine | 7.85e-08 | 11 |
lower digestive tract | 1.10e-07 | 5 |
pigment epithelium of eye | 5.41e-07 | 11 |
rectum | 5.53e-07 | 4 |
gastrointestinal system | 9.25e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.84e-21 | 143 |
carcinoma | 4.30e-20 | 106 |
germ cell and embryonal cancer | 2.66e-10 | 22 |
germ cell cancer | 2.66e-10 | 22 |
cancer | 2.47e-09 | 235 |
disease of cellular proliferation | 8.36e-09 | 239 |