FFCP PHASE1:Mm9::chr15:75760211..75760222,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22122|HGNC=|UniProt=|association_with_transcript=-49bp_to_uc007wht.1_5end|description=CAGE_peak_3_at_Tsta3_5end|id=chr15:75760211..75760222,-|ontology_enrichment_celltype=CL:0000063!2.93e-09!66|ontology_enrichment_celltype_v019_2=CL:0002563,1.35e-07,9;CL:0002251,1.35e-07,9;CL:0000066,1.85e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.05e-10!15;UBERON:0001242!7.94e-09!13;UBERON:0000060!7.94e-09!13;UBERON:0001262!7.94e-09!13;UBERON:0004786!7.94e-09!13|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.69e-12,15;UBERON:0001242,2.00e-10,13;UBERON:0001262,2.00e-10,13;UBERON:0004786,2.00e-10,13;UBERON:0000160,6.46e-08,31;UBERON:0003350,1.35e-07,9;UBERON:0004808,1.35e-07,9;UBERON:0001277,1.35e-07,9|phase1_expression=1.28119077683835,5.93258192986914,4.09499315450582,2.72217790176147,3.00537437967808,3.02182689441402,3.73780224952841,1.03298658753261,0.84473233291,2.57470978954193,0.856089841127525,2.23362045186942,1.19840510951844,1.39872643870396,0.333109761815663,1.21485160433896,0.699561878128147,0.630924330716475,1.64537320326887,2.12194825899015,2.12608225377674,1.88652807281682,2.35079810225042,3.51983330145495,2.75291137280604,4.59385571292016,3.01533397311352,2.80112602491656,4.18051522804023,3.2763916868791,3.99114919179548,0,1.23012957516914,0,3.17736781726402,2.65975432573588,2.45003227514843,5.02237956884289,3.1253413780952,5.23523743973798,2.35292595212406,2.73218193983378,5.82612423637384,1.00717454380462,1.31790010585369,1.28482726513177,0.782391344348039,1.09012578190223,0.659058548203415,0.972149495371417,0.979904951377538,1.43752564364972,1.17447824240415,1.45072428402269,0.672187598284928,1.54355661621568,1.43266719969378,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,1.35537812827653,0.889294796111139,2.6996991518442,3.9554654502679,2.8419204597844,0.898800331555214,0.768436610643109,0.933206510776299,0.135005938331691,0.630974884054146,0.571301968807607,1.54607978666129,0.244981598429908,0.862609239164127,0,2.20231761998777,0.766124028511126,0.614426133024974,0.131886287730194,0.457438218012048,0.52091337055676,0.558365998002762,1.12552522006336,0.916789486660861,0.589257170947335,0.284743361598206,0.559198337475902,1.13589289999776,1.51143120213571,1.44932244350839,1.72084775396277,1.3599426674155,3.2382191498269,0.649776417447669,0,0.983110940922263,1.36344258062446,1.81850203222008,1.41335829804136,0.704217098883403,2.56652954828636,0,0,1.08245520505607,1.26679932737549,1.51657333504435,1.25602267690966,1.03575153458869,0.742210695324124,0.867426633830679,0.913396434936424,1.15307748628029,0.150722640552623,0.823120949949934,0.502666365318702,0.741584903203122,0.722996784599558,0.884610551949874,0.323533699894818,1.32504911076236,0.484875253135222,0,1.46390398505774,1.67557365450764,2.81002760729451,1.91704199209472,2.99951365496704,3.04968544975355,0.599162557619291,0.457500602818626,0.125654352112864,0.695297280769106,1.27857728665165,1.24672826735736,0.811206315338788,0.203678727700633,0.870848794270651,1.26361379216837,1.47309299120532,1.04096354370163,1.37941262660084,0.720248519221397,0.452114453507145,0.748401490664606,0.640568601424249,0.468508622798644,0.517406741478031,0.646703978798527,0.567318240503458,0.527853372491847,0.43839146485515,1.11218899690239,0.348252166522167,0.61734640922383,0.199034266818493,6.31991868581911,2.83082697826187,2.55747149456033,1.24275463521301,0.469052119962192,0.900310307305074,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,1.3413670069981,1.5179494507732,0.329119699826961,0.656669856316381,0.486412857275134,0.584799949701329,0,0.671032093801859,0.420579897128254,0.823236899034275,2.64335026387038,1.05780226665418,0.639864751605702,1.85789337488351,1.41754207454303,1.4117846723634,0.22237804384487,1.71203063501303,1.42358718463353,0.823494773620054,1.25667604400135,0.994782360205754,0.38992817423824,0.898819408654221,2.16138049874694,1.99141273254367,1.51734320762465,0.913988100877831,1.1270773567308,0.610953983535943,0.193952487167626,0.631222379012867,0.632365371242573,0.147610147979602,0.627994911365499,0.493588655687202,0.296452627087149,1.00107063429656,1.17935397067922,2.02375901146368,1.21716072833102,0.482354319504834,0.50925170356284,1.43848068725405,1.29708181420028,1.37280706594041,0,0.744281895337007,0.312037673114561,0.252578877947112,0.717589654087649,1.92977408545347,0.923765950833023,0.37898282354097,0.325929952884052,1.18821560042632,1.40814148973101,1.17254380209271,0.714130922658041,0.975668239288994,1.7339865851681,0.664394068946325,1.59454768657487,0.655453258862952,0.863424909329478,0.433947175744535,0,4.35124547054968,0.491764273019036,0.827810238914197,1.60550589987792,1.40654023910644,0.819674726883377,1.00988370881749,0.315508219416257,1.17131623288992,1.50796378412959,0.955875191810208,0.891194696329576,0.566153061577665,0.809621403349789,0.292255857911312,1.18586333383957,0.963963949265421,0.425820255624806,0.890328018336276,0.488660878060728,0.494910368917606,0,0.485561272309963,1.209294227859,1.32023555829129,1.47650946440386,0.614870295887855,0.775284879504663,1.09060118843252,0.356497378384721,0.632073515871632,2.10837217149998,1.03135543248187,0.340439605753788,0.720244376125241,0.905510786479282,1.50035924522115,0.709360934569094,0.535106452806212,0.822745103010605,0.913394847343798,0.469343416127421,0.63549621259146,2.42581237860458,1.31909002353184,1.13025098687134,0.542816324353403,0.716234064018819,0.328281799490123,1.1659233465194,1.29797711407357,1.19609616558497,1.23832120777933,0.925972636848558,0.376736914009382,0.546776910884101,0.457556346413045,1.5298058699447,1.53946597556024,1.38199973804424,2.86401185404534,0.632671987162271,0.813277868507395,1.29606408986162,0.627264888043406,0.218362563746178,0.944050424693745,0.743881101528023,1.04702376793612,1.8146096260851,1.24267862617385,10.1464728963154,1.34564891439581,0.827292452285488,0.777804753376191,0.516639293910924,0.844780627453891,0.352071715937262,0.5208175393758,1.04859344425711,8.45544422891021,6.33666013767304,1.89606672376907,1.41907650703115,1.43795340030758,0.77952493786677,0.716106782669926,1.19208812868759,1.20195449519969,0.738447635872886,0.908698049533329,1.21930890648,1.31074040677893,0.877120926657772,0.865906574762965,1.5193997283604,1.13365191807606,0.221985953374065,0.986852422704233,0.335769232728157,0.386379188064381,0.93841237725591,0.915758121336325,0.643105137237198,1.50471631210609,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,1.5107877947794,1.35004500046361,0.45032120322422,0.906284817968409,0,0.518936737920883,0,0.853668028770671,0.486213434136588,0.419226325255965,1.10306105070008,1.11123363900808,0.618105171716683,0,0.505394423527595,0.760437899670719,0.943131706930381,0.655490552289177,0.704276676453562,0.746661096422973,0,0.579421629724277,1.35036454324594,0.412085900803307,0.883193520806384,1.71434626192708,0.354951612318675,0.238436189947321,0.436039249896986,0.470546902076653,0.846146078916765,1.09756783723664,0.526139422875686,0.950628796921032,0,0.711810108745045,0.689531376628944,0,0.77468420592983,1.54325288784913,0.749431733813838,0.701794825336225,0.644613162144895,1.3390183244819,1.10295709559758,1.15933917810211|short_description=p3@Tsta3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22122 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-49bp_to_uc007wht.1_5end | |||
|cluster_id=chr15:75760211..75760222,- | |||
|description=CAGE_peak_3_at_Tsta3_5end | |||
|id=chr15:75760211..75760222,- | |||
|ontology_enrichment_celltype=CL:0000063!2.93e-09!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.35e-07,9;CL:0002251,1.35e-07,9;CL:0000066,1.85e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.05e-10!15;UBERON:0001242!7.94e-09!13;UBERON:0000060!7.94e-09!13;UBERON:0001262!7.94e-09!13;UBERON:0004786!7.94e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.69e-12,15;UBERON:0001242,2.00e-10,13;UBERON:0001262,2.00e-10,13;UBERON:0004786,2.00e-10,13;UBERON:0000160,6.46e-08,31;UBERON:0003350,1.35e-07,9;UBERON:0004808,1.35e-07,9;UBERON:0001277,1.35e-07,9 | |||
|phase1_expression=1.28119077683835,5.93258192986914,4.09499315450582,2.72217790176147,3.00537437967808,3.02182689441402,3.73780224952841,1.03298658753261,0.84473233291,2.57470978954193,0.856089841127525,2.23362045186942,1.19840510951844,1.39872643870396,0.333109761815663,1.21485160433896,0.699561878128147,0.630924330716475,1.64537320326887,2.12194825899015,2.12608225377674,1.88652807281682,2.35079810225042,3.51983330145495,2.75291137280604,4.59385571292016,3.01533397311352,2.80112602491656,4.18051522804023,3.2763916868791,3.99114919179548,0,1.23012957516914,0,3.17736781726402,2.65975432573588,2.45003227514843,5.02237956884289,3.1253413780952,5.23523743973798,2.35292595212406,2.73218193983378,5.82612423637384,1.00717454380462,1.31790010585369,1.28482726513177,0.782391344348039,1.09012578190223,0.659058548203415,0.972149495371417,0.979904951377538,1.43752564364972,1.17447824240415,1.45072428402269,0.672187598284928,1.54355661621568,1.43266719969378,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,1.35537812827653,0.889294796111139,2.6996991518442,3.9554654502679,2.8419204597844,0.898800331555214,0.768436610643109,0.933206510776299,0.135005938331691,0.630974884054146,0.571301968807607,1.54607978666129,0.244981598429908,0.862609239164127,0,2.20231761998777,0.766124028511126,0.614426133024974,0.131886287730194,0.457438218012048,0.52091337055676,0.558365998002762,1.12552522006336,0.916789486660861,0.589257170947335,0.284743361598206,0.559198337475902,1.13589289999776,1.51143120213571,1.44932244350839,1.72084775396277,1.3599426674155,3.2382191498269,0.649776417447669,0,0.983110940922263,1.36344258062446,1.81850203222008,1.41335829804136,0.704217098883403,2.56652954828636,0,0,1.08245520505607,1.26679932737549,1.51657333504435,1.25602267690966,1.03575153458869,0.742210695324124,0.867426633830679,0.913396434936424,1.15307748628029,0.150722640552623,0.823120949949934,0.502666365318702,0.741584903203122,0.722996784599558,0.884610551949874,0.323533699894818,1.32504911076236,0.484875253135222,0,1.46390398505774,1.67557365450764,2.81002760729451,1.91704199209472,2.99951365496704,3.04968544975355,0.599162557619291,0.457500602818626,0.125654352112864,0.695297280769106,1.27857728665165,1.24672826735736,0.811206315338788,0.203678727700633,0.870848794270651,1.26361379216837,1.47309299120532,1.04096354370163,1.37941262660084,0.720248519221397,0.452114453507145,0.748401490664606,0.640568601424249,0.468508622798644,0.517406741478031,0.646703978798527,0.567318240503458,0.527853372491847,0.43839146485515,1.11218899690239,0.348252166522167,0.61734640922383,0.199034266818493,6.31991868581911,2.83082697826187,2.55747149456033,1.24275463521301,0.469052119962192,0.900310307305074,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,1.3413670069981,1.5179494507732,0.329119699826961,0.656669856316381,0.486412857275134,0.584799949701329,0,0.671032093801859,0.420579897128254,0.823236899034275,2.64335026387038,1.05780226665418,0.639864751605702,1.85789337488351,1.41754207454303,1.4117846723634,0.22237804384487,1.71203063501303,1.42358718463353,0.823494773620054,1.25667604400135,0.994782360205754,0.38992817423824,0.898819408654221,2.16138049874694,1.99141273254367,1.51734320762465,0.913988100877831,1.1270773567308,0.610953983535943,0.193952487167626,0.631222379012867,0.632365371242573,0.147610147979602,0.627994911365499,0.493588655687202,0.296452627087149,1.00107063429656,1.17935397067922,2.02375901146368,1.21716072833102,0.482354319504834,0.50925170356284,1.43848068725405,1.29708181420028,1.37280706594041,0,0.744281895337007,0.312037673114561,0.252578877947112,0.717589654087649,1.92977408545347,0.923765950833023,0.37898282354097,0.325929952884052,1.18821560042632,1.40814148973101,1.17254380209271,0.714130922658041,0.975668239288994,1.7339865851681,0.664394068946325,1.59454768657487,0.655453258862952,0.863424909329478,0.433947175744535,0,4.35124547054968,0.491764273019036,0.827810238914197,1.60550589987792,1.40654023910644,0.819674726883377,1.00988370881749,0.315508219416257,1.17131623288992,1.50796378412959,0.955875191810208,0.891194696329576,0.566153061577665,0.809621403349789,0.292255857911312,1.18586333383957,0.963963949265421,0.425820255624806,0.890328018336276,0.488660878060728,0.494910368917606,0,0.485561272309963,1.209294227859,1.32023555829129,1.47650946440386,0.614870295887855,0.775284879504663,1.09060118843252,0.356497378384721,0.632073515871632,2.10837217149998,1.03135543248187,0.340439605753788,0.720244376125241,0.905510786479282,1.50035924522115,0.709360934569094,0.535106452806212,0.822745103010605,0.913394847343798,0.469343416127421,0.63549621259146,2.42581237860458,1.31909002353184,1.13025098687134,0.542816324353403,0.716234064018819,0.328281799490123,1.1659233465194,1.29797711407357,1.19609616558497,1.23832120777933,0.925972636848558,0.376736914009382,0.546776910884101,0.457556346413045,1.5298058699447,1.53946597556024,1.38199973804424,2.86401185404534,0.632671987162271,0.813277868507395,1.29606408986162,0.627264888043406,0.218362563746178,0.944050424693745,0.743881101528023,1.04702376793612,1.8146096260851,1.24267862617385,10.1464728963154,1.34564891439581,0.827292452285488,0.777804753376191,0.516639293910924,0.844780627453891,0.352071715937262,0.5208175393758,1.04859344425711,8.45544422891021,6.33666013767304,1.89606672376907,1.41907650703115,1.43795340030758,0.77952493786677,0.716106782669926,1.19208812868759,1.20195449519969,0.738447635872886,0.908698049533329,1.21930890648,1.31074040677893,0.877120926657772,0.865906574762965,1.5193997283604,1.13365191807606,0.221985953374065,0.986852422704233,0.335769232728157,0.386379188064381,0.93841237725591,0.915758121336325,0.643105137237198,1.50471631210609,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,1.5107877947794,1.35004500046361,0.45032120322422,0.906284817968409,0,0.518936737920883,0,0.853668028770671,0.486213434136588,0.419226325255965,1.10306105070008,1.11123363900808,0.618105171716683,0,0.505394423527595,0.760437899670719,0.943131706930381,0.655490552289177,0.704276676453562,0.746661096422973,0,0.579421629724277,1.35036454324594,0.412085900803307,0.883193520806384,1.71434626192708,0.354951612318675,0.238436189947321,0.436039249896986,0.470546902076653,0.846146078916765,1.09756783723664,0.526139422875686,0.950628796921032,0,0.711810108745045,0.689531376628944,0,0.77468420592983,1.54325288784913,0.749431733813838,0.701794825336225,0.644613162144895,1.3390183244819,1.10295709559758,1.15933917810211 | |||
|short_description=p3@Tsta3 | |||
}} |
Revision as of 11:59, 5 August 2015
Short description: | p3@Tsta3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tsta3_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_uc007wht.1_5end |
EntrezGene: | 22122 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.35e-07 | 9 |
epithelial cell of alimentary canal | 1.35e-07 | 9 |
epithelial cell | 1.85e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.69e-12 | 15 |
intestinal mucosa | 2.00e-10 | 13 |
wall of intestine | 2.00e-10 | 13 |
gastrointestinal system mucosa | 2.00e-10 | 13 |
intestine | 6.46e-08 | 31 |
epithelium of mucosa | 1.35e-07 | 9 |
gastrointestinal system epithelium | 1.35e-07 | 9 |
intestinal epithelium | 1.35e-07 | 9 |