FFCP PHASE1:Hg19::chr4:57898643..57898658,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C772 | |||
|description=CAGE_peak_at_chr4:57898643..57898658,- | |||
|id=chr4:57898643..57898658,- | |||
|ontology_enrichment_celltype=CL:0000222!1.19e-12!119;CL:0000055!4.12e-12!180;CL:0000220!8.04e-10!246;CL:0002321!2.04e-09!248;CL:0000183!2.12e-07!59;CL:0000192!5.56e-07!42;CL:0000514!5.56e-07!42;CL:0000680!7.04e-07!57;CL:0000056!7.04e-07!57;CL:0000355!7.04e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.43e-08,121;CL:0000359,8.87e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.03e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.84e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.85e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!9.32e-12!79;UBERON:0007798!9.32e-12!79;UBERON:0003914!1.48e-10!118;UBERON:0000477!2.74e-10!286;UBERON:0000483!4.50e-10!309;UBERON:0000119!4.82e-10!312;UBERON:0001009!1.80e-09!113;UBERON:0004535!5.04e-09!110;UBERON:0000475!6.31e-09!365;UBERON:0000055!1.70e-08!69;UBERON:0004872!1.84e-08!84;UBERON:0002385!5.09e-08!63;UBERON:0001015!5.09e-08!63;UBERON:0000383!5.09e-08!63;UBERON:0000481!7.67e-08!347;UBERON:0003103!9.16e-08!69;UBERON:0001134!1.01e-07!61;UBERON:0002036!1.01e-07!61;UBERON:0003082!1.01e-07!61;UBERON:0001981!1.57e-07!60;UBERON:0007500!1.57e-07!60;UBERON:0004537!1.57e-07!60;UBERON:0006965!1.57e-07!60;UBERON:0003886!2.27e-07!63;UBERON:0004111!2.29e-07!241;UBERON:0000468!5.41e-07!659;UBERON:0005256!5.45e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.08e-09;6!UBERON:0002358;9.08e-09;6!UBERON:0003684;9.08e-09;6!UBERON:0001178;9.08e-09;6!UBERON:0004457;9.14e-09;9!UBERON:0000042;9.14e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.94e-12,78;UBERON:0007798,1.94e-12,78;UBERON:0003914,2.33e-11,117;UBERON:0004535,6.72e-10,109;UBERON:0000055,2.07e-09,68;UBERON:0001009,2.56e-09,112;UBERON:0001637,1.46e-08,42;UBERON:0003509,1.46e-08,42;UBERON:0004572,1.46e-08,42;UBERON:0003688,1.59e-08,6;UBERON:0002358,1.59e-08,6;UBERON:0003684,1.59e-08,6;UBERON:0001178,1.59e-08,6;UBERON:0007500,1.13e-07,59;UBERON:0001981,1.13e-07,59;UBERON:0004537,1.13e-07,59;UBERON:0006965,1.13e-07,59;UBERON:0003104,1.27e-07,160;UBERON:0009142,1.27e-07,160;UBERON:0002417,2.50e-07,60;UBERON:0000916,2.50e-07,60;UBERON:0002100,3.75e-07,199;UBERON:0004872,4.63e-07,83;UBERON:0004573,8.93e-07,33;UBERON:0004571,8.93e-07,33 | |||
|phase1_expression=3.45188920614058,2.35510576280081,4.51054093107108,1.0007329835313,3.5756887554183,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,3.36162573225888,0,2.19093027116212,1.46379839637152,0.123121058076788,0.408001382488506,0.940364164434263,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,2.50668955317945,2.17269778441236,3.1811437882044,4.37971383272372,1.03988298880475,1.55210578223795,0.790513071238134,0.654895377488563,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0,0.56530794192401,1.67799774483962,0.825354125820202,0.208994966536811,2.84258435086262,1.42306505074684,2.00832367658802,1.20848795132744,1.52054421143703,1.46437234528902,0,0,0.892997282840798,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0.872188104285069,9.93943903390637,3.67228483827281,0.662045904066094,4.30254931123221,1.06400514659507,0,6.4049397437823,7.89336154934912,0.622422070799533,0.269421344139376,0.653847612453835,1.21085942115945,2.88087962239999,0,0,0,0,0,0,0,0.204154171254893,0.737005903870608,0.103325781175765,0,2.22540236350701,0,0,0.505008341862199,0,0.277064115484183,0,1.22595118319608,0.751190294532984,2.83580457900053,0,1.2813443329114,0.423863802319124,0.600182192168805,0.206105058476878,0.772921620136887,1.11670113798954,1.0126579934476,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,2.13005755509969,0.10075209822764,0.847802961552438,0.386521706326594,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,1.92972281457866,0,0.928735856063958,0,0.473227200159376,0.674338760312407,0,0.55146986366197,0.653638332277218,0.237270619111097,0.808987848960987,0.784885860501384,0,0,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,0,0.614942192715568,2.74508496477641,0.98775256867763,0,0.100528972411631,0.462942225792648,0.651616610620649,1.03993478527958,1.44331342025273,0,0.821860859650752,0.866198686566443,2.77791307545966,1.52203321787679,0,0,0,0,0,0,1.17587489739202,0.567100388969546,0,0.290633938513962,0,0,0,0,0,0,0.952468414382536,0.381988425558278,1.17217447210047,0,1.13110241973656,1.20137223137567,3.14409075893636,0.112131084345361,0,0.66004457238855,5.17086863031111,0,0,1.06375246633948,3.12022310734098,0.257207374262142,0,0.266422179016099,3.43147184779554,0,1.64648067356154,0,2.13235169245527,0,2.1100756394171,1.74306691720059,2.29937879718731,0,0,0,0.958499421966331,10.3375742250703,0,2.02693829334611,0.410952645100767,0.358121926479791,0,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0.500170521059677,0,9.15071790735551,12.6684582045985,9.14674007196821,4.80279801470124,0.300946099727719,0,2.0694614258501,0,0.553107505625109,0.60818530127658,0.783204629850962,0.343143423810856,0,0,0,0,0,0,3.96972492510043,1.99500565274481,5.3325417942284,5.50998341799514,6.65219423786715,8.68611174175481,2.96836132889982,0.616838775210622,0.532685175939381,0.328508624055237,0,0.116210378459959,0,1.40354529212299,0.184161977871793,1.49258782613989,0.546273504020151,0.524497659837696,1.35359883872224,1.84836809050595,0.784349769176855,0,3.37765212457202,0,0.340187410553031,1.29549549661284,7.71136263451447,1.08378575017541,5.51858751240339,1.01950509218015,3.3243040357149,0.671624264166535,0,0,0.512900250232778,1.64007322849853,0.325378394664303,0.206082023295445,0,0.082509499920588,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.537101224341368,0.290033387828457,0.426133137080504,0.267096106940212,0.991709492165869,0.384380134730212,0.638063562472921,0.2023155617111,0,5.98143458978216,0,0.616067160352178,0,0.869932992075073,2.22389062924704,1.00187420719394,1.86079184679834,1.58189712359363,0.953150969619124,0.511795582622668,0.42793898803392,0.318203247925937,0,1.2591072030832,1.37268514868027,0.942499218765491,2.02182481573316,1.58510321173008,0,1.46290121726877,1.21856744815642,0,0.409499734223957,0.848432591722276,0,1.65409603063837,3.3171948762061,1.75380354101505,0,0.655894752046633,1.62328301570163,0.92947049429925,1.69017361519345,0.143411352204052,0.392996164052485,2.1400263088875,0.354761064070598,1.68886108238131,1.31717957183961,0,0.699869440489966,0.288666338176536,0,0,0.376575203107117,1.29151611801369,0,0.443430153536676,1.60806380144872,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.684704037099577,0,0,0.169291777801603,0.481764225311099,0.201799707191048,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,10.7593913655578,0,0,1.43176155503017,0,4.97663340258892,0.0898683511473268,0,0,1.08507746200627,0,1.11136990144637,1.93866549219044,0.185536196323703,0,0,0,2.8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| |||
|short_description=p@chr4:57898643..57898658,- | |||
}} |
Revision as of 01:11, 22 January 2014
Short description: | p@chr4:57898643..57898658, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr4:57898643..57898658, - |
Coexpression cluster: | C772_Smooth_Fibroblast_Adipocyte_Preadipocyte_hepatic_Renal_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.43e-08 | 121 |
vascular associated smooth muscle cell | 8.87e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.94e-12 | 78 |
vascular system | 1.94e-12 | 78 |
epithelial tube | 2.33e-11 | 117 |
cardiovascular system | 6.72e-10 | 109 |
vessel | 2.07e-09 | 68 |
circulatory system | 2.56e-09 | 112 |
artery | 1.46e-08 | 42 |
arterial blood vessel | 1.46e-08 | 42 |
arterial system | 1.46e-08 | 42 |
omentum | 1.59e-08 | 6 |
peritoneum | 1.59e-08 | 6 |
abdominal cavity | 1.59e-08 | 6 |
visceral peritoneum | 1.59e-08 | 6 |
epithelial tube open at both ends | 1.13e-07 | 59 |
blood vessel | 1.13e-07 | 59 |
blood vasculature | 1.13e-07 | 59 |
vascular cord | 1.13e-07 | 59 |
mesenchyme | 1.27e-07 | 160 |
entire embryonic mesenchyme | 1.27e-07 | 160 |
abdominal segment of trunk | 2.50e-07 | 60 |
abdomen | 2.50e-07 | 60 |
trunk | 3.75e-07 | 199 |
splanchnic layer of lateral plate mesoderm | 4.63e-07 | 83 |
systemic artery | 8.93e-07 | 33 |
systemic arterial system | 8.93e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.85e-07 | 14 |