FFCP PHASE1:Hg19::chr5:122424918..122424944,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9350 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NQX0 | |||
|association_with_transcript=77bp_to_NM_001136239,uc003kti.2_5end | |||
|description=CAGE_peak_1_at_PRDM6_5end | |||
|id=chr5:122424918..122424944,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002598;3.66e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002598,3.74e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;3.14e-08;4!DOID:1612;3.14e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.51e-08,4;DOID:1612,4.51e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.27e-14!115;UBERON:0003076!1.73e-10!15;UBERON:0003057!1.73e-10!15;UBERON:0004732!1.12e-08!13;UBERON:0004921!4.34e-08!129;UBERON:0004185!4.34e-08!129;UBERON:0000062!5.32e-08!511;UBERON:0000064!8.69e-08!219;UBERON:0000063!1.05e-07!97;UBERON:0004733!1.08e-07!12;UBERON:0002028!1.08e-07!12;UBERON:0007277!1.08e-07!12;UBERON:0001007!2.68e-07!155;UBERON:0001555!2.68e-07!155;UBERON:0007026!2.68e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002360;1.05e-08;2!UBERON:0000094;1.05e-08;2!UBERON:0010743;1.05e-08;2!UBERON:0000922;5.74e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002360,1.20e-08,2;UBERON:0000094,1.20e-08,2;UBERON:0010743,1.20e-08,2;UBERON:0007023,4.98e-08,114 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.738726348460727,0.816002764977012,1.88072832886853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0.795285947051099,0.973269740605272,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886413581652058,0.529636723252875,1.43418310374407,0.709336764396714,0,0,0,0.311211035399766,0.134710672069688,0,0,0,1.40592859100278,0,0,0,0,0,0,0,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0.515281080091258,0.18611685633159,0,0,0,0,2.58633690910099,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0.857867961948885,0,1.64648067356154,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0.457847324091717,0.660075999364704,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27948895655667,3.85145089230528,0.95460974377781,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0,0,1.13008116620243,1.10273068709225,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,5.53033375755224,3.13146551049382,5.33917253478107,0,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,35.2668939204393,0,0,0,0,0,0,0,0,9.56841034678256,0,0,0,0.278304294485554,0,1.04171104434093,1.13697999995054,0,0.227586896570999,0,0.472775363535873,0,0,0.694499979733169,0,0,0,0.331737779793674,0,2.4132393686937,0.762569244632931,0.557694977114413,0.923403102045565,0.113942055847001,0,1.25660702173681,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.649165919226273,0.995261931078505,1.50377859655677,1.83309043480088,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,2.41981432097328,1.83643656978294,18.0713617737476,1.9542044523884,1.14057010536972,0,0,0.313932918407225,0,0,0,0.520679215005393,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.0882561266915003,0.451961481561065,0,0,0.126621591911757,0,0,10.0322907527496,0.39961921916426,0.864542502924636,0.229073192331831,0,0,0.49701014226173,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,5.27068975226872,0,0,0,0,1.07493555978762,0,0,0,0,0,1.47641222272123,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.472091293214983,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0.328370082997356,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,4.91222097811396,27.3535490873419,7.04206394090232,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,2.86704597845036,1.99672292766334,0.372578417648301,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0.231522474323834,0,0,2.77921302444875,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.504143392443436,0.484100767249525,0.322951291263702,1.42769420259154,0,0.235939446695481,0,0,0,0.690359926060101,0,1.72983755203292,0,0,0,0,0,0.405225507710368,0,0,0.253663240775627,0,0,0.992422356778588,0,0.255524855279191,0,0,1.21393120847326,0,2.83847584520444,0,0,0.135939465953663,0.131545547125698,0,0,6.75040598514421,0,0,10.0447459256045,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0.118920090777569,0,0,0,0.154348316215889,0.874238242015829,0,12.992861052957,0,0.588925401344836,0.594092800654172,10.1437374620016,0,0,0,0,0,0,0,2.19100916473955,0,0.143339583151451,5.20646155237509,0.203974470572744,0.872701380680755,1.0580536810308,0,0,0,0.252332849670158,0,0,0,0,0.275684698604535,0,0.151557396436479,0,0,0,0.639701945702943,2.85677317756488,0,0.0620747142958579,0,0.190941474834495,1.0105859447911,0.217716747896961,0.342233301085281,0.26940821205835,0.645499848534087,1.66330178273007,0.325613074443898,0,0,0.0898252021065869,0,1.22241444182866,0.406896178315738,11.3178651611537,0.603821380773079,0 | |||
|short_description=p1@PRDM6 | |||
}} |
Revision as of 07:06, 22 January 2014
Short description: | p1@PRDM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRDM6_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_NM_001136239, uc003kti.2_5end |
EntrezGene: | PRDM6 |
HGNC: | 9350 |
UniProt: | Q9NQX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 3.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
meninx | 1.20e-08 | 2 |
membrane organ | 1.20e-08 | 2 |
meningeal cluster | 1.20e-08 | 2 |
adult organism | 4.98e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.51e-08 | 4 |
breast cancer | 4.51e-08 | 4 |