FFCP PHASE1:Mm9::chr16:72663293..72663310,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=19876|HGNC=|MCL_coexpression_id=2184|UniProt=G5E843,E9Q833,O89026,Q3UQ03,Q3UXH3,Q3V357,Q3UQW4|association_with_transcript=-83bp_to_ENSMUST00000023600,ENSMUST00000171732,NM_019413,uc007zqz.1,uc007zra.1,uc007zrb.1_5end|description=CAGE_peak_4_at_Robo1_5end|id=chr16:72663293..72663310,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.16e-09!333;UBERON:0000922!1.78e-07!328;UBERON:0004121!6.86e-07!102;UBERON:0000924!6.86e-07!102;UBERON:0006601!6.86e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002102,4.57e-07,7;UBERON:0004710,4.57e-07,7;UBERON:0005419,4.57e-07,7;UBERON:0005417,4.57e-07,7;UBERON:0005729,4.57e-07,7|phase1_expression=4.80446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,8.9019242778223,4.7609188134483,8.23980824558033,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,8.19147937236973,7.2903206699113,6.52007380189284,1.71390590642282,0.662605622854841,13.1065155160001,9.10531974673246,14.7075005857603,0,1.40456071893706,0.614426133024974,7.51751840062105,6.77008562657831,6.77187381723788,0.279182999001381,0,0.763991238884051,1.17851434189467,1.13897344639282,2.98239113320481,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,3.52108549441701,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,0,0,0.890652834388949,2.08182392119363,1.82679286987285,2.53677046981664,2.86373017049983,2.82212897125692,3.14166478324189,0,0,0,0.485300549842228,0.220841518460394,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0.748953197024114,1.37250180845588,17.591609295801,1.04294592115366,0.511430914660661,0.62336413367868,0.811206315338788,0.509196819251581,0.497627882440372,0,0.210441855886474,3.6433724029557,1.60931473103431,1.62055916824814,1.35634336052144,1.90502197623718,2.17793324484245,2.71735001223214,0.258703370739016,7.97601573851516,21.936305299467,23.7534017621331,9.42541649438572,13.0682207136031,8.00979983000983,4.7329891373827,4.97585667046233,0,0,0,2.07125772535502,3.75241695969754,2.70093092191522,4.02466050494857,1.18058539048442,2.00547246753592,1.16266972375204,0,0.350296027101508,1.15191894939436,0,0,0,0.219550115291051,0,0.841159794256509,1.3377599609307,0,0,8.10495352033889,6.0381534683714,1.41754207454303,0.80673409849337,0.444756087689741,0.760902504450237,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,1.32767530667157,2.39921876480431,5.63538678365402,3.05476991767971,2.90928730751439,2.52488951605147,0.569128834118316,0.147610147979602,0,0.123397163921801,0.296452627087149,0.667380422864376,1.17935397067922,0,0,0.241177159752417,0.50925170356284,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.358794827043824,0.482443521363367,0.184753190166605,2.65287976478679,2.28150967018836,1.86719594352707,1.17345124144251,1.50755631697634,0.238043640886014,1.95133647857799,0.788175720530955,0.8858587585951,0.318909537314974,1.14704320301017,0.172684981865896,0.289298117163023,0,0,0.983528546038072,0,0.160550589987792,0.234423373184406,0,0.252470927204373,0.315508219416257,0.780877488593277,0.646270193198397,0,1.11399337041197,0.849229592366497,0,0.292255857911312,0.395287777946524,0.321321316421807,0.851640511249612,1.78065603667255,1.30309567482861,1.15479086080775,0,0.971122544619926,0.906970670894253,0.188605079755898,0,0,0.775284879504663,0,0,0.316036757935816,0,0,1.02131881726136,5.76195500900193,3.88076051348264,12.0028739617692,10.1083933176096,4.10248280484762,3.62007845324666,1.522324745573,0,0,0.220528398054962,5.7710188529518,6.62004149453213,12.5450883850564,15.6377770644109,17.2347944732314,0,0.18542530201051,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,12.9697757368265,3.25311147402958,2.16010681643603,4.18176592028937,2.40198820120795,2.02296519577231,2.56225712748541,0.523511883968059,0,0,0,5.53211220362722,1.98550188548517,1.55560950675238,0.645799117388655,0.506868376472335,1.40828686374905,0.651021924219751,0.524296722128554,0,0.576060012515731,2.21207784439725,2.43270258348197,2.77319584345034,1.55904987573354,0.895133478337407,0.596044064343795,1.56254084375959,0.147689527174577,0.706765149637033,0.609654453239999,0.705783295957884,1.16949456887703,1.44317762460494,0.584384510907845,1.13365191807606,0.665957860122194,0.448569283047378,0,1.54551675225752,0,1.83151624267265,1.92931541171159,0.501572104035363,0.564751842617067,0,0.572895513439397,0,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,4.67043064128795,17.5570944296454,8.87814749921498,3.64660075602441,2.72497111416377,0.919217542250071,1.77797382241292,0.824140228955577,2.56735367673452,1.51618327058278,2.02783439912192,2.82939512079114,2.52832070168682,3.20125762024346,2.23998328926892,3.33405583898152,2.78122382267653,3.27945674788299,1.64834360321323,2.64958056241915,1.71434626192708,1.59728225543404,0.476872379894642,2.90692833264657,1.50575008664529,2.36920902096694,1.82927972872773,2.36762740294059,1.49384525230448,1.68342681497322,2.49133538060766,2.56111654176465,2.45538625901814,2.78886314134739,2.12197272079256,4.49659040288303,4.21076895201735,2.79332370262788,0.382576664137687,1.54413993383661,0.231867835620421|short_description=p4@Robo1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19876 | |||
|HGNC= | |||
|MCL_coexpression_id=2184 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E843,uniprot:E9Q833,uniprot:O89026,uniprot:Q3UQ03,uniprot:Q3UXH3,uniprot:Q3V357,uniprot:Q3UQW4 | |||
|association_with_transcript=-83bp_to_ENSMUST00000023600,ENSMUST00000171732,NM_019413,uc007zqz.1,uc007zra.1,uc007zrb.1_5end | |||
|cluster_id=chr16:72663293..72663310,+ | |||
|description=CAGE_peak_4_at_Robo1_5end | |||
|id=chr16:72663293..72663310,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.16e-09!333;UBERON:0000922!1.78e-07!328;UBERON:0004121!6.86e-07!102;UBERON:0000924!6.86e-07!102;UBERON:0006601!6.86e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,4.57e-07,7;UBERON:0004710,4.57e-07,7;UBERON:0005419,4.57e-07,7;UBERON:0005417,4.57e-07,7;UBERON:0005729,4.57e-07,7 | |||
|phase1_expression=4.80446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,8.9019242778223,4.7609188134483,8.23980824558033,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,8.19147937236973,7.2903206699113,6.52007380189284,1.71390590642282,0.662605622854841,13.1065155160001,9.10531974673246,14.7075005857603,0,1.40456071893706,0.614426133024974,7.51751840062105,6.77008562657831,6.77187381723788,0.279182999001381,0,0.763991238884051,1.17851434189467,1.13897344639282,2.98239113320481,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,3.52108549441701,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,0,0,0.890652834388949,2.08182392119363,1.82679286987285,2.53677046981664,2.86373017049983,2.82212897125692,3.14166478324189,0,0,0,0.485300549842228,0.220841518460394,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0.748953197024114,1.37250180845588,17.591609295801,1.04294592115366,0.511430914660661,0.62336413367868,0.811206315338788,0.509196819251581,0.497627882440372,0,0.210441855886474,3.6433724029557,1.60931473103431,1.62055916824814,1.35634336052144,1.90502197623718,2.17793324484245,2.71735001223214,0.258703370739016,7.97601573851516,21.936305299467,23.7534017621331,9.42541649438572,13.0682207136031,8.00979983000983,4.7329891373827,4.97585667046233,0,0,0,2.07125772535502,3.75241695969754,2.70093092191522,4.02466050494857,1.18058539048442,2.00547246753592,1.16266972375204,0,0.350296027101508,1.15191894939436,0,0,0,0.219550115291051,0,0.841159794256509,1.3377599609307,0,0,8.10495352033889,6.0381534683714,1.41754207454303,0.80673409849337,0.444756087689741,0.760902504450237,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,1.32767530667157,2.39921876480431,5.63538678365402,3.05476991767971,2.90928730751439,2.52488951605147,0.569128834118316,0.147610147979602,0,0.123397163921801,0.296452627087149,0.667380422864376,1.17935397067922,0,0,0.241177159752417,0.50925170356284,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.358794827043824,0.482443521363367,0.184753190166605,2.65287976478679,2.28150967018836,1.86719594352707,1.17345124144251,1.50755631697634,0.238043640886014,1.95133647857799,0.788175720530955,0.8858587585951,0.318909537314974,1.14704320301017,0.172684981865896,0.289298117163023,0,0,0.983528546038072,0,0.160550589987792,0.234423373184406,0,0.252470927204373,0.315508219416257,0.780877488593277,0.646270193198397,0,1.11399337041197,0.849229592366497,0,0.292255857911312,0.395287777946524,0.321321316421807,0.851640511249612,1.78065603667255,1.30309567482861,1.15479086080775,0,0.971122544619926,0.906970670894253,0.188605079755898,0,0,0.775284879504663,0,0,0.316036757935816,0,0,1.02131881726136,5.76195500900193,3.88076051348264,12.0028739617692,10.1083933176096,4.10248280484762,3.62007845324666,1.522324745573,0,0,0.220528398054962,5.7710188529518,6.62004149453213,12.5450883850564,15.6377770644109,17.2347944732314,0,0.18542530201051,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,12.9697757368265,3.25311147402958,2.16010681643603,4.18176592028937,2.40198820120795,2.02296519577231,2.56225712748541,0.523511883968059,0,0,0,5.53211220362722,1.98550188548517,1.55560950675238,0.645799117388655,0.506868376472335,1.40828686374905,0.651021924219751,0.524296722128554,0,0.576060012515731,2.21207784439725,2.43270258348197,2.77319584345034,1.55904987573354,0.895133478337407,0.596044064343795,1.56254084375959,0.147689527174577,0.706765149637033,0.609654453239999,0.705783295957884,1.16949456887703,1.44317762460494,0.584384510907845,1.13365191807606,0.665957860122194,0.448569283047378,0,1.54551675225752,0,1.83151624267265,1.92931541171159,0.501572104035363,0.564751842617067,0,0.572895513439397,0,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,4.67043064128795,17.5570944296454,8.87814749921498,3.64660075602441,2.72497111416377,0.919217542250071,1.77797382241292,0.824140228955577,2.56735367673452,1.51618327058278,2.02783439912192,2.82939512079114,2.52832070168682,3.20125762024346,2.23998328926892,3.33405583898152,2.78122382267653,3.27945674788299,1.64834360321323,2.64958056241915,1.71434626192708,1.59728225543404,0.476872379894642,2.90692833264657,1.50575008664529,2.36920902096694,1.82927972872773,2.36762740294059,1.49384525230448,1.68342681497322,2.49133538060766,2.56111654176465,2.45538625901814,2.78886314134739,2.12197272079256,4.49659040288303,4.21076895201735,2.79332370262788,0.382576664137687,1.54413993383661,0.231867835620421 | |||
|short_description=p4@Robo1 | |||
}} |
Revision as of 01:23, 4 August 2015
Short description: | p4@Robo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Robo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2184 |
Association with transcript: | -83bp_to_ENSMUST00000023600, ENSMUST00000171732, NM_019413, uc007zqz.1, uc007zra.1, uc007zrb.1_5end |
EntrezGene: | 19876 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
forelimb | 4.57e-07 | 7 |
pectoral appendage | 4.57e-07 | 7 |
pectoral appendage bud | 4.57e-07 | 7 |
forelimb bud | 4.57e-07 | 7 |
forelimb/pectoral fin field | 4.57e-07 | 7 |