FFCP PHASE1:Hg19::chr5:147582537..147582549,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404203 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29486 | |||
|TSSclassifier=weak | |||
|UniProt=Q6UWN8 | |||
|association_with_transcript=133bp_to_ENST00000325630,uc003lpa.2_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_4_at_SPINK6_5end | |||
|id=chr5:147582537..147582549,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.94e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.86e-09,2;CL:0000066,5.04e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.35e-45;29!UBERON:0006595;5.74e-07;86 | |||
|ontology_enrichment_disease=DOID:305!3.97e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.45e-18,106;DOID:0050687,3.50e-13,143;DOID:162,1.32e-07,235;DOID:14566,1.99e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.02e-59!9;UBERON:0001557!1.52e-27!19;UBERON:0008947!4.97e-13!38;UBERON:0003258!4.97e-13!38;UBERON:0000072!1.67e-10!46;UBERON:0000065!6.40e-09!53;UBERON:0000063!1.18e-07!97;UBERON:0001004!1.26e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.31e-147;9!UBERON:0001557;1.31e-147;9!UBERON:0000072;4.29e-33;37!UBERON:0000065;6.53e-28;44!UBERON:0001004;1.29e-14;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.31e-147,9;UBERON:0001557,8.65e-70,19;UBERON:0008947,1.08e-34,38;UBERON:0003258,1.08e-34,38;UBERON:0000072,5.95e-28,47;UBERON:0000065,2.94e-24,54;UBERON:0001004,1.53e-17,74;UBERON:0001041,8.02e-15,87;UBERON:0001048,1.12e-11,160;UBERON:0004921,1.21e-10,118;UBERON:0001007,1.39e-10,145;UBERON:0001555,1.39e-10,145;UBERON:0007026,1.39e-10,145;UBERON:0004119,1.63e-09,160;UBERON:0000925,1.63e-09,160;UBERON:0006595,1.63e-09,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6476120035859,7.41772636343647,9.15841913557232,12.6838068642253,9.15093665188106,10.2026366217772,11.1909985772936,12.5581737680221,11.9271618653381,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,1.18219047581419,0,0,0.83654246567162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,5.1852687615695,0.407712618220842,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929931402945002,0,0,0,0.3414369541879,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p4@SPINK6 | |||
}} |
Revision as of 08:11, 22 January 2014
Short description: | p4@SPINK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPINK6_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 133bp_to_ENST00000325630, uc003lpa.2_5end |
EntrezGene: | SPINK6 |
HGNC: | 29486 |
UniProt: | Q6UWN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.86e-09 | 2 |
epithelial cell | 5.04e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.31e-147 | 9 |
upper respiratory tract | 8.65e-70 | 19 |
respiratory primordium | 1.08e-34 | 38 |
endoderm of foregut | 1.08e-34 | 38 |
segment of respiratory tract | 5.95e-28 | 47 |
respiratory tract | 2.94e-24 | 54 |
respiratory system | 1.53e-17 | 74 |
foregut | 8.02e-15 | 87 |
primordium | 1.12e-11 | 160 |
subdivision of digestive tract | 1.21e-10 | 118 |
digestive system | 1.39e-10 | 145 |
digestive tract | 1.39e-10 | 145 |
primitive gut | 1.39e-10 | 145 |
endoderm-derived structure | 1.63e-09 | 160 |
endoderm | 1.63e-09 | 160 |
presumptive endoderm | 1.63e-09 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.45e-18 | 106 |
cell type cancer | 3.50e-13 | 143 |
cancer | 1.32e-07 | 235 |
disease of cellular proliferation | 1.99e-07 | 239 |