FFCP PHASE1:Mm9::chr17:34324296..34324325,-: Difference between revisions
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{{FFCP|EntrezGene=16912|HGNC=|MCL_coexpression_id=452|UniProt=|association_with_transcript=0bp_to_ENSMUST00000114230,ENSMUST00000174473_5end|description=CAGE_peak_2_at_Psmb9_5end|id=chr17:34324296..34324325,-|ontology_enrichment_celltype=CL:0000063!5.25e-13!66;CL:0002320!2.27e-09!46;CL:0000134!2.27e-09!46;CL:0000219!2.44e-09!54;CL:0000988!9.30e-07!32;CL:0002032!9.30e-07!32;CL:0000037!9.30e-07!32;CL:0000566!9.30e-07!32;CL:0000837!9.30e-07!32|ontology_enrichment_celltype_v019_2=CL:0002320,4.41e-10,46;CL:0000134,4.41e-10,46;CL:0000219,5.16e-10,54;CL:0000988,2.15e-07,32;CL:0002032,2.15e-07,32;CL:0000037,2.15e-07,32;CL:0000837,2.15e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.15e-17!70;UBERON:0002193!6.71e-16!48;UBERON:0004119!7.45e-15!130;UBERON:0000925!7.45e-15!130;UBERON:0006595!7.45e-15!130;UBERON:0001007!9.37e-15!128;UBERON:0001555!9.37e-15!128;UBERON:0007026!9.37e-15!128;UBERON:0002390!1.79e-14!45;UBERON:0003061!1.79e-14!45;UBERON:0004921!7.48e-14!126;UBERON:0004185!7.48e-14!126;UBERON:0000490!4.21e-12!66;UBERON:0003929!5.68e-12!55;UBERON:0005911!1.11e-10!69;UBERON:0004923!1.45e-09!24;UBERON:0000344!1.86e-09!15;UBERON:0002384!2.27e-09!46;UBERON:0005057!5.74e-09!51;UBERON:0002371!7.37e-09!16;UBERON:0001242!1.61e-08!13;UBERON:0000060!1.61e-08!13;UBERON:0001262!1.61e-08!13;UBERON:0004786!1.61e-08!13;UBERON:0002204!8.18e-08!32;UBERON:0004177!3.90e-07!29;UBERON:0005409!5.75e-07!59;UBERON:0000160!6.46e-07!43;UBERON:0001474!7.42e-07!22;UBERON:0004765!7.42e-07!22;UBERON:0001434!7.42e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.06e-16,48;UBERON:0002405,3.06e-16,48;UBERON:0004119,3.64e-16,118;UBERON:0000925,3.64e-16,118;UBERON:0006595,3.64e-16,118;UBERON:0001007,4.37e-16,116;UBERON:0001555,4.37e-16,116;UBERON:0007026,4.37e-16,116;UBERON:0004921,3.95e-15,114;UBERON:0002390,8.84e-15,45;UBERON:0003061,8.84e-15,45;UBERON:0000490,2.62e-12,66;UBERON:0003929,3.21e-12,55;UBERON:0005911,1.17e-10,69;UBERON:0002384,4.41e-10,46;UBERON:0004923,9.36e-10,24;UBERON:0000344,1.20e-09,15;UBERON:0000160,1.55e-09,31;UBERON:0002371,4.94e-09,16;UBERON:0005409,7.71e-09,47;UBERON:0001242,1.10e-08,13;UBERON:0001262,1.10e-08,13;UBERON:0004786,1.10e-08,13;UBERON:0002204,6.47e-08,32;UBERON:0000077,1.53e-07,35;UBERON:0004177,2.87e-07,29;UBERON:0005057,2.87e-07,29;UBERON:0001474,6.24e-07,22;UBERON:0004765,6.24e-07,22;UBERON:0001434,6.24e-07,22|phase1_expression=0.640595388419176,62.4665979674456,64.1548927539246,76.8259096719348,75.1343594919521,30.8897860317877,36.6771845734975,35.8962839167582,3.66050677594334,4.68129052643987,1.36974374580404,2.23362045186942,37.3217591250028,39.7762831006438,14.6568295198892,17.412872995525,11.8925519281785,49.8430221266016,34.5528372686462,39.8926272690148,8.84450217571126,34.5532510179081,56.41915445401,37.758211779244,39.6878056246204,59.7201242679621,59.4451554699523,53.8678081714723,43.705386474966,76.365129317259,50.7762869400648,0,0,0,38.1284138071682,49.5379243168307,43.4880728838846,87.0545791932768,75.7895284188086,63.3463730208296,82.352408324342,84.6976401348473,81.5657393092338,7.80560271448579,6.89363132292699,1.83546752161682,25.8189143634853,3.70642765846759,9.66619204031676,3.69416808241138,6.99932108126813,4.31257693094915,26.0063039389491,21.035502118329,20.5017217476903,1.80081605225163,4.87106847895886,2.57836046138721,0.404632921719196,0,0,5.76035704517525,13.3394219416671,111.587564942893,147.341088022479,120.781619540837,26.3648097256196,14.6002956022191,0,0.270011876663381,0,1.14260393761521,0.883474163806454,0.122490799214954,0.0958454710182364,0,2.20231761998777,1.0214987046815,1.22885226604995,0.131886287730194,0,0,1.67509799400829,3.37657566019008,1.37518422999129,0.294628585473668,0.854230084794618,0.745597783301202,1.21161909333094,1.66257432234928,19.1310562543107,25.8127163094416,5.439770669662,11.3337670243942,2.59910566979068,10.7526452903361,7.72444310724635,2.72688516124892,4.67614808285164,3.5333957451034,0.422530259330042,2.56652954828636,7.64415719119937,7.11066703153331,0.649473123033642,1.77351905832569,1.51657333504435,13.0169622879728,27.188477782953,11.875371125186,1.38788261412909,0.608930956624282,1.61430848079241,3.01445281105245,2.3517741427141,6.40899615781345,2.22475470960936,11.1341504828332,23.8844849026466,2.26473589926373,6.18356251689102,5.81850303762267,20.5030937339934,0.292780797011547,0.83778682725382,51.0914110417183,42.5343691996017,51.5916348654331,52.988284689468,1.64769703345305,2.28750301409313,0.125654352112864,0.521472960576829,1.27857728665165,1.0389402227978,0.973447578406546,1.52759045775474,11.0722203842983,7.83440551144392,4.20883711772948,0.520481771850815,0.689706313300419,0.180062129805349,0.452114453507145,0.340182495756639,0.512454881139399,1.12442069471675,2.58703370739016,0,0.189106080167819,0.351902248327898,0.876782929710299,0.834141747676794,0,1.4404749548556,0.796137067273973,66.0080396074441,50.4401897944842,52.5702473881846,0.207125772535502,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16912 | |||
|HGNC= | |||
|MCL_coexpression_id=452 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000114230,ENSMUST00000174473_5end | |||
|cluster_id=chr17:34324296..34324325,- | |||
|description=CAGE_peak_2_at_Psmb9_5end | |||
|id=chr17:34324296..34324325,- | |||
|ontology_enrichment_celltype=CL:0000063!5.25e-13!66;CL:0002320!2.27e-09!46;CL:0000134!2.27e-09!46;CL:0000219!2.44e-09!54;CL:0000988!9.30e-07!32;CL:0002032!9.30e-07!32;CL:0000037!9.30e-07!32;CL:0000566!9.30e-07!32;CL:0000837!9.30e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,4.41e-10,46;CL:0000134,4.41e-10,46;CL:0000219,5.16e-10,54;CL:0000988,2.15e-07,32;CL:0002032,2.15e-07,32;CL:0000037,2.15e-07,32;CL:0000837,2.15e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.15e-17!70;UBERON:0002193!6.71e-16!48;UBERON:0004119!7.45e-15!130;UBERON:0000925!7.45e-15!130;UBERON:0006595!7.45e-15!130;UBERON:0001007!9.37e-15!128;UBERON:0001555!9.37e-15!128;UBERON:0007026!9.37e-15!128;UBERON:0002390!1.79e-14!45;UBERON:0003061!1.79e-14!45;UBERON:0004921!7.48e-14!126;UBERON:0004185!7.48e-14!126;UBERON:0000490!4.21e-12!66;UBERON:0003929!5.68e-12!55;UBERON:0005911!1.11e-10!69;UBERON:0004923!1.45e-09!24;UBERON:0000344!1.86e-09!15;UBERON:0002384!2.27e-09!46;UBERON:0005057!5.74e-09!51;UBERON:0002371!7.37e-09!16;UBERON:0001242!1.61e-08!13;UBERON:0000060!1.61e-08!13;UBERON:0001262!1.61e-08!13;UBERON:0004786!1.61e-08!13;UBERON:0002204!8.18e-08!32;UBERON:0004177!3.90e-07!29;UBERON:0005409!5.75e-07!59;UBERON:0000160!6.46e-07!43;UBERON:0001474!7.42e-07!22;UBERON:0004765!7.42e-07!22;UBERON:0001434!7.42e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.06e-16,48;UBERON:0002405,3.06e-16,48;UBERON:0004119,3.64e-16,118;UBERON:0000925,3.64e-16,118;UBERON:0006595,3.64e-16,118;UBERON:0001007,4.37e-16,116;UBERON:0001555,4.37e-16,116;UBERON:0007026,4.37e-16,116;UBERON:0004921,3.95e-15,114;UBERON:0002390,8.84e-15,45;UBERON:0003061,8.84e-15,45;UBERON:0000490,2.62e-12,66;UBERON:0003929,3.21e-12,55;UBERON:0005911,1.17e-10,69;UBERON:0002384,4.41e-10,46;UBERON:0004923,9.36e-10,24;UBERON:0000344,1.20e-09,15;UBERON:0000160,1.55e-09,31;UBERON:0002371,4.94e-09,16;UBERON:0005409,7.71e-09,47;UBERON:0001242,1.10e-08,13;UBERON:0001262,1.10e-08,13;UBERON:0004786,1.10e-08,13;UBERON:0002204,6.47e-08,32;UBERON:0000077,1.53e-07,35;UBERON:0004177,2.87e-07,29;UBERON:0005057,2.87e-07,29;UBERON:0001474,6.24e-07,22;UBERON:0004765,6.24e-07,22;UBERON:0001434,6.24e-07,22 | |||
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| |||
|short_description=p2@Psmb9 | |||
}} |
Revision as of 16:45, 4 August 2015
Short description: | p2@Psmb9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Psmb9_5end |
Coexpression cluster: | MCL_coexpression_mm9:452 |
Association with transcript: | 0bp_to_ENSMUST00000114230, ENSMUST00000174473_5end |
EntrezGene: | 16912 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 4.41e-10 | 46 |
mesenchymal cell | 4.41e-10 | 46 |
motile cell | 5.16e-10 | 54 |
hematopoietic cell | 2.15e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.15e-07 | 32 |
hematopoietic stem cell | 2.15e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.15e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.06e-16 | 48 |
immune system | 3.06e-16 | 48 |
endoderm-derived structure | 3.64e-16 | 118 |
endoderm | 3.64e-16 | 118 |
presumptive endoderm | 3.64e-16 | 118 |
digestive system | 4.37e-16 | 116 |
digestive tract | 4.37e-16 | 116 |
primitive gut | 4.37e-16 | 116 |
subdivision of digestive tract | 3.95e-15 | 114 |
hematopoietic system | 8.84e-15 | 45 |
blood island | 8.84e-15 | 45 |
unilaminar epithelium | 2.62e-12 | 66 |
gut epithelium | 3.21e-12 | 55 |
endo-epithelium | 1.17e-10 | 69 |
connective tissue | 4.41e-10 | 46 |
organ component layer | 9.36e-10 | 24 |
mucosa | 1.20e-09 | 15 |
intestine | 1.55e-09 | 31 |
bone marrow | 4.94e-09 | 16 |
gastrointestinal system | 7.71e-09 | 47 |
intestinal mucosa | 1.10e-08 | 13 |
wall of intestine | 1.10e-08 | 13 |
gastrointestinal system mucosa | 1.10e-08 | 13 |
musculoskeletal system | 6.47e-08 | 32 |
mixed endoderm/mesoderm-derived structure | 1.53e-07 | 35 |
hemopoietic organ | 2.87e-07 | 29 |
immune organ | 2.87e-07 | 29 |
bone element | 6.24e-07 | 22 |
skeletal element | 6.24e-07 | 22 |
skeletal system | 6.24e-07 | 22 |