FFCP PHASE1:Mm9::chr17:34742388..34742421,+: Difference between revisions
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{{FFCP|EntrezGene=55979|HGNC=|MCL_coexpression_id=12|UniProt=O35083,E9PY97,G3UY51,Q91VJ9|association_with_transcript=-384bp_to_ENSMUST00000037489,ENSMUST00000169278,ENSMUST00000173973,NM_001163379,uc008ccz.2_5end|description=CAGE_peak_3_at_Agpat1_5end|id=chr17:34742388..34742421,+|ontology_enrichment_celltype=CL:0002563!1.14e-07!9;CL:0002251!1.14e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,2.03e-12,6;CL:0000677,2.03e-12,6;CL:0000584,2.03e-12,6;CL:0000075,1.64e-10,7;CL:0002563,2.65e-10,9;CL:0002251,2.65e-10,9;CL:0000066,1.99e-07,25;CL:0000682,7.35e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.18e-14!59;UBERON:0000160!4.89e-13!43;UBERON:0000344!1.13e-12!15;UBERON:0001242!5.95e-11!13;UBERON:0000060!5.95e-11!13;UBERON:0001262!5.95e-11!13;UBERON:0004786!5.95e-11!13;UBERON:0004923!6.49e-09!24;UBERON:0003350!1.14e-07!9;UBERON:0004808!1.14e-07!9;UBERON:0001277!1.14e-07!9;UBERON:0004119!2.19e-07!130;UBERON:0000925!2.19e-07!130;UBERON:0006595!2.19e-07!130;UBERON:0001007!9.28e-07!128;UBERON:0001555!9.28e-07!128;UBERON:0007026!9.28e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.72e-38,31;UBERON:0005409,6.13e-31,47;UBERON:0000344,1.72e-20,15;UBERON:0001242,5.91e-17,13;UBERON:0001262,5.91e-17,13;UBERON:0004786,5.91e-17,13;UBERON:0004923,2.05e-15,24;UBERON:0004119,4.94e-12,118;UBERON:0000925,4.94e-12,118;UBERON:0006595,4.94e-12,118;UBERON:0001007,1.90e-11,116;UBERON:0001555,1.90e-11,116;UBERON:0007026,1.90e-11,116;UBERON:0003350,2.65e-10,9;UBERON:0004808,2.65e-10,9;UBERON:0001277,2.65e-10,9;UBERON:0004921,8.57e-10,114;UBERON:0000485,3.31e-08,11;UBERON:0002108,3.62e-08,4|phase1_expression=0,38.3872948403297,48.2299193752908,34.7833843002855,25.5456822272637,7.21880869221126,5.84031601488814,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,27.8386815660528,22.2527002635155,25.8404383851759,25.4149577733854,22.1935369666466,10.0712412311878,14.3657173963161,5.09980174507201,0,0,0,0.288851619751275,1.32987716286794,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,1.34408066129201,3.08977724289854,0,0,0,0,0,0,0,0,0,0,7.53613606145796,0,0.29688427812965,0,0,0,0,0,1.0053327306374,3.21353458054686,1.87979163995885,0,0,0,0,5.59175283654366,0.292780797011547,0.628340120440365,31.1657607354481,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0.758168275301024,38.7213014831112,0,0,0,0,0,0,0,3.88055056108524,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,144.062589380936,39.9320355661952,0,0,0.257734922644187,1.21010114774006,2.89091456998331,5.51654315726422,29.8953308773042,13.8347121968169,4.27269854960458,5.96869416123452,2.72949721966768,30.5598598942435,27.0172562343368,34.2522989997512,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.49095073923223,0.379419222745544,1.32849133181642,1.09899109488962,1.72756029490521,0.592905254174298,0,0.196558995113203,0.224862112384854,0.608580364165509,0.241177159752417,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0.538192240565737,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,2.75381692122966,0,0.49465875882444,0,0,0,0,24.1929094402776,0,0,0,0,0,0,0,0,0,0.138199973804424,3.81868247206045,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,2.40198820120795,0.944050424693745,0.661227645802687,7.59092231753686,1.8146096260851,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,1.54551675225752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.463537303779422,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.711810108745045,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.859484216193193,0.382576664137687,0.220591419119515,0.463735671240843|short_description=p3@Agpat1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:55979 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35083,uniprot:E9PY97,uniprot:G3UY51,uniprot:Q91VJ9 | |||
|association_with_transcript=-384bp_to_ENSMUST00000037489,ENSMUST00000169278,ENSMUST00000173973,NM_001163379,uc008ccz.2_5end | |||
|cluster_id=chr17:34742388..34742421,+ | |||
|description=CAGE_peak_3_at_Agpat1_5end | |||
|id=chr17:34742388..34742421,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.14e-07!9;CL:0002251!1.14e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.03e-12,6;CL:0000677,2.03e-12,6;CL:0000584,2.03e-12,6;CL:0000075,1.64e-10,7;CL:0002563,2.65e-10,9;CL:0002251,2.65e-10,9;CL:0000066,1.99e-07,25;CL:0000682,7.35e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.18e-14!59;UBERON:0000160!4.89e-13!43;UBERON:0000344!1.13e-12!15;UBERON:0001242!5.95e-11!13;UBERON:0000060!5.95e-11!13;UBERON:0001262!5.95e-11!13;UBERON:0004786!5.95e-11!13;UBERON:0004923!6.49e-09!24;UBERON:0003350!1.14e-07!9;UBERON:0004808!1.14e-07!9;UBERON:0001277!1.14e-07!9;UBERON:0004119!2.19e-07!130;UBERON:0000925!2.19e-07!130;UBERON:0006595!2.19e-07!130;UBERON:0001007!9.28e-07!128;UBERON:0001555!9.28e-07!128;UBERON:0007026!9.28e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.72e-38,31;UBERON:0005409,6.13e-31,47;UBERON:0000344,1.72e-20,15;UBERON:0001242,5.91e-17,13;UBERON:0001262,5.91e-17,13;UBERON:0004786,5.91e-17,13;UBERON:0004923,2.05e-15,24;UBERON:0004119,4.94e-12,118;UBERON:0000925,4.94e-12,118;UBERON:0006595,4.94e-12,118;UBERON:0001007,1.90e-11,116;UBERON:0001555,1.90e-11,116;UBERON:0007026,1.90e-11,116;UBERON:0003350,2.65e-10,9;UBERON:0004808,2.65e-10,9;UBERON:0001277,2.65e-10,9;UBERON:0004921,8.57e-10,114;UBERON:0000485,3.31e-08,11;UBERON:0002108,3.62e-08,4 | |||
|phase1_expression=0,38.3872948403297,48.2299193752908,34.7833843002855,25.5456822272637,7.21880869221126,5.84031601488814,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,27.8386815660528,22.2527002635155,25.8404383851759,25.4149577733854,22.1935369666466,10.0712412311878,14.3657173963161,5.09980174507201,0,0,0,0.288851619751275,1.32987716286794,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,1.34408066129201,3.08977724289854,0,0,0,0,0,0,0,0,0,0,7.53613606145796,0,0.29688427812965,0,0,0,0,0,1.0053327306374,3.21353458054686,1.87979163995885,0,0,0,0,5.59175283654366,0.292780797011547,0.628340120440365,31.1657607354481,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0.758168275301024,38.7213014831112,0,0,0,0,0,0,0,3.88055056108524,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,144.062589380936,39.9320355661952,0,0,0.257734922644187,1.21010114774006,2.89091456998331,5.51654315726422,29.8953308773042,13.8347121968169,4.27269854960458,5.96869416123452,2.72949721966768,30.5598598942435,27.0172562343368,34.2522989997512,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.49095073923223,0.379419222745544,1.32849133181642,1.09899109488962,1.72756029490521,0.592905254174298,0,0.196558995113203,0.224862112384854,0.608580364165509,0.241177159752417,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0.538192240565737,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,2.75381692122966,0,0.49465875882444,0,0,0,0,24.1929094402776,0,0,0,0,0,0,0,0,0,0.138199973804424,3.81868247206045,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,2.40198820120795,0.944050424693745,0.661227645802687,7.59092231753686,1.8146096260851,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,1.54551675225752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.463537303779422,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.711810108745045,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.859484216193193,0.382576664137687,0.220591419119515,0.463735671240843 | |||
|short_description=p3@Agpat1 | |||
}} |
Revision as of 17:37, 4 August 2015
Short description: | p3@Agpat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Agpat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -384bp_to_ENSMUST00000037489, ENSMUST00000169278, ENSMUST00000173973, NM_001163379, uc008ccz.2_5end |
EntrezGene: | 55979 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.03e-12 | 6 |
gut absorptive cell | 2.03e-12 | 6 |
enterocyte | 2.03e-12 | 6 |
columnar/cuboidal epithelial cell | 1.64e-10 | 7 |
intestinal epithelial cell | 2.65e-10 | 9 |
epithelial cell of alimentary canal | 2.65e-10 | 9 |
epithelial cell | 1.99e-07 | 25 |
M cell of gut | 7.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.72e-38 | 31 |
gastrointestinal system | 6.13e-31 | 47 |
mucosa | 1.72e-20 | 15 |
intestinal mucosa | 5.91e-17 | 13 |
wall of intestine | 5.91e-17 | 13 |
gastrointestinal system mucosa | 5.91e-17 | 13 |
organ component layer | 2.05e-15 | 24 |
endoderm-derived structure | 4.94e-12 | 118 |
endoderm | 4.94e-12 | 118 |
presumptive endoderm | 4.94e-12 | 118 |
digestive system | 1.90e-11 | 116 |
digestive tract | 1.90e-11 | 116 |
primitive gut | 1.90e-11 | 116 |
epithelium of mucosa | 2.65e-10 | 9 |
gastrointestinal system epithelium | 2.65e-10 | 9 |
intestinal epithelium | 2.65e-10 | 9 |
subdivision of digestive tract | 8.57e-10 | 114 |
simple columnar epithelium | 3.31e-08 | 11 |
small intestine | 3.62e-08 | 4 |