FFCP PHASE1:Mm9::chr17:36282884..36282901,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=88|UniProt=|association_with_transcript=-16bp_to_ENSMUST00000174094_5end|description=CAGE_peak_1_at_ENSMUST00000174094_5end|id=chr17:36282884..36282901,-|ontology_enrichment_celltype=CL:0002563!2.86e-12!9;CL:0002251!2.86e-12!9;CL:0000239!3.16e-09!6;CL:0000677!3.16e-09!6;CL:0000212!3.16e-09!6;CL:0000584!3.16e-09!6;CL:0000075!1.03e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,2.55e-23,9;CL:0002251,2.55e-23,9;CL:0000239,3.95e-17,6;CL:0000677,3.95e-17,6;CL:0000584,3.95e-17,6;CL:0000075,1.40e-14,7;CL:0000066,1.03e-13,25;CL:0002076,2.48e-13,15;CL:0000223,1.37e-09,20;CL:0000682,1.52e-09,3;CL:0002250,8.24e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.72e-22!43;UBERON:0000344!8.14e-20!15;UBERON:0001242!2.48e-17!13;UBERON:0000060!2.48e-17!13;UBERON:0001262!2.48e-17!13;UBERON:0004786!2.48e-17!13;UBERON:0005409!2.04e-15!59;UBERON:0003350!2.86e-12!9;UBERON:0004808!2.86e-12!9;UBERON:0001277!2.86e-12!9;UBERON:0004923!6.82e-12!24;UBERON:0001007!7.05e-11!128;UBERON:0001555!7.05e-11!128;UBERON:0007026!7.05e-11!128;UBERON:0004119!1.67e-10!130;UBERON:0000925!1.67e-10!130;UBERON:0006595!1.67e-10!130;UBERON:0004921!1.39e-09!126;UBERON:0004185!1.39e-09!126;UBERON:0000485!1.43e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.19e-49,31;UBERON:0000344,9.88e-39,15;UBERON:0001242,1.18e-33,13;UBERON:0001262,1.18e-33,13;UBERON:0004786,1.18e-33,13;UBERON:0005409,6.42e-31,47;UBERON:0003350,2.55e-23,9;UBERON:0004808,2.55e-23,9;UBERON:0001277,2.55e-23,9;UBERON:0004923,6.30e-23,24;UBERON:0000485,8.83e-19,11;UBERON:0001007,1.34e-12,116;UBERON:0001555,1.34e-12,116;UBERON:0007026,1.34e-12,116;UBERON:0004119,2.76e-12,118;UBERON:0000925,2.76e-12,118;UBERON:0006595,2.76e-12,118;UBERON:0002108,1.59e-11,4;UBERON:0004921,1.52e-10,114;UBERON:0000331,3.68e-09,3;UBERON:0002116,3.68e-09,3;UBERON:0001204,3.68e-09,3;UBERON:0001168,3.68e-09,3|phase1_expression=0,140.637089278663,121.484796917006,223.823516367054,334.097451874214,12.7588246653036,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,20.7990149631429,19.7291981717766,63.7397480167672,49.5376295582936,51.0666821465557,47.6958782835498,70.3164062030207,12.8603696180077,0,0,0,1.44425809875637,2.65975432573588,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0.131886287730194,0,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,10.8474685733107,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,15.0719662573069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.9019798816021,15.073682299822,0.213288250535234,0,0.128867461322093,0.605050573870028,0.889512175379481,1.14135375667535,24.6755112003146,2.63518327558417,5.02670417600539,4.17808591286417,2.9244613067868,20.6728463990471,21.18152888772,19.7149860521824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,1.30371981153621,0.848725428875941,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6547735443104,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0.480781798079875,0.590758108698309,0.605798699688886,0.228620419965,0.302478555410522,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0,0,0.231768651889711,0.38581844092741,0,0,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.467863216890817,0,0,0,0|short_description=p1@ENSMUST00000174094}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_ENSMUST00000174094_5end | |||
|cluster_id=chr17:36282884..36282901,- | |||
|description=CAGE_peak_1_at_ENSMUST00000174094_5end | |||
|id=chr17:36282884..36282901,- | |||
|ontology_enrichment_celltype=CL:0002563!2.86e-12!9;CL:0002251!2.86e-12!9;CL:0000239!3.16e-09!6;CL:0000677!3.16e-09!6;CL:0000212!3.16e-09!6;CL:0000584!3.16e-09!6;CL:0000075!1.03e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.55e-23,9;CL:0002251,2.55e-23,9;CL:0000239,3.95e-17,6;CL:0000677,3.95e-17,6;CL:0000584,3.95e-17,6;CL:0000075,1.40e-14,7;CL:0000066,1.03e-13,25;CL:0002076,2.48e-13,15;CL:0000223,1.37e-09,20;CL:0000682,1.52e-09,3;CL:0002250,8.24e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.72e-22!43;UBERON:0000344!8.14e-20!15;UBERON:0001242!2.48e-17!13;UBERON:0000060!2.48e-17!13;UBERON:0001262!2.48e-17!13;UBERON:0004786!2.48e-17!13;UBERON:0005409!2.04e-15!59;UBERON:0003350!2.86e-12!9;UBERON:0004808!2.86e-12!9;UBERON:0001277!2.86e-12!9;UBERON:0004923!6.82e-12!24;UBERON:0001007!7.05e-11!128;UBERON:0001555!7.05e-11!128;UBERON:0007026!7.05e-11!128;UBERON:0004119!1.67e-10!130;UBERON:0000925!1.67e-10!130;UBERON:0006595!1.67e-10!130;UBERON:0004921!1.39e-09!126;UBERON:0004185!1.39e-09!126;UBERON:0000485!1.43e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.19e-49,31;UBERON:0000344,9.88e-39,15;UBERON:0001242,1.18e-33,13;UBERON:0001262,1.18e-33,13;UBERON:0004786,1.18e-33,13;UBERON:0005409,6.42e-31,47;UBERON:0003350,2.55e-23,9;UBERON:0004808,2.55e-23,9;UBERON:0001277,2.55e-23,9;UBERON:0004923,6.30e-23,24;UBERON:0000485,8.83e-19,11;UBERON:0001007,1.34e-12,116;UBERON:0001555,1.34e-12,116;UBERON:0007026,1.34e-12,116;UBERON:0004119,2.76e-12,118;UBERON:0000925,2.76e-12,118;UBERON:0006595,2.76e-12,118;UBERON:0002108,1.59e-11,4;UBERON:0004921,1.52e-10,114;UBERON:0000331,3.68e-09,3;UBERON:0002116,3.68e-09,3;UBERON:0001204,3.68e-09,3;UBERON:0001168,3.68e-09,3 | |||
|phase1_expression=0,140.637089278663,121.484796917006,223.823516367054,334.097451874214,12.7588246653036,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,20.7990149631429,19.7291981717766,63.7397480167672,49.5376295582936,51.0666821465557,47.6958782835498,70.3164062030207,12.8603696180077,0,0,0,1.44425809875637,2.65975432573588,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0.131886287730194,0,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,10.8474685733107,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,15.0719662573069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.9019798816021,15.073682299822,0.213288250535234,0,0.128867461322093,0.605050573870028,0.889512175379481,1.14135375667535,24.6755112003146,2.63518327558417,5.02670417600539,4.17808591286417,2.9244613067868,20.6728463990471,21.18152888772,19.7149860521824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,1.30371981153621,0.848725428875941,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6547735443104,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0.480781798079875,0.590758108698309,0.605798699688886,0.228620419965,0.302478555410522,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0,0,0.231768651889711,0.38581844092741,0,0,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p1@ENSMUST00000174094 | |||
}} |
Latest revision as of 20:41, 4 August 2015
Short description: | p1@ENSMUST00000174094 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000174094_5end |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | -16bp_to_ENSMUST00000174094_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.55e-23 | 9 |
epithelial cell of alimentary canal | 2.55e-23 | 9 |
brush border epithelial cell | 3.95e-17 | 6 |
gut absorptive cell | 3.95e-17 | 6 |
enterocyte | 3.95e-17 | 6 |
columnar/cuboidal epithelial cell | 1.40e-14 | 7 |
epithelial cell | 1.03e-13 | 25 |
endo-epithelial cell | 2.48e-13 | 15 |
endodermal cell | 1.37e-09 | 20 |
M cell of gut | 1.52e-09 | 3 |
intestinal crypt stem cell | 8.24e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.19e-49 | 31 |
mucosa | 9.88e-39 | 15 |
intestinal mucosa | 1.18e-33 | 13 |
wall of intestine | 1.18e-33 | 13 |
gastrointestinal system mucosa | 1.18e-33 | 13 |
gastrointestinal system | 6.42e-31 | 47 |
epithelium of mucosa | 2.55e-23 | 9 |
gastrointestinal system epithelium | 2.55e-23 | 9 |
intestinal epithelium | 2.55e-23 | 9 |
organ component layer | 6.30e-23 | 24 |
simple columnar epithelium | 8.83e-19 | 11 |
digestive system | 1.34e-12 | 116 |
digestive tract | 1.34e-12 | 116 |
primitive gut | 1.34e-12 | 116 |
endoderm-derived structure | 2.76e-12 | 118 |
endoderm | 2.76e-12 | 118 |
presumptive endoderm | 2.76e-12 | 118 |
small intestine | 1.59e-11 | 4 |
subdivision of digestive tract | 1.52e-10 | 114 |
ileal mucosa | 3.68e-09 | 3 |
ileum | 3.68e-09 | 3 |
mucosa of small intestine | 3.68e-09 | 3 |
wall of small intestine | 3.68e-09 | 3 |