FFCP PHASE1:Mm9::chr18:70212951..70212985,-: Difference between revisions
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{{FFCP|EntrezGene=80718|HGNC=|MCL_coexpression_id=1168|UniProt=Q549X4,Q99P58,Q05D38|association_with_transcript=37bp_to_NM_030554,uc008fnz.1,uc012beo.1,uc012bep.1_5end|description=CAGE_peak_3_at_Rab27b_5end|id=chr18:70212951..70212985,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.05e-20!59;UBERON:0000160!2.16e-14!43;UBERON:0004119!7.18e-12!130;UBERON:0000925!7.18e-12!130;UBERON:0006595!7.18e-12!130;UBERON:0001007!1.52e-11!128;UBERON:0001555!1.52e-11!128;UBERON:0007026!1.52e-11!128;UBERON:0004921!1.16e-10!126;UBERON:0004185!1.16e-10!126;UBERON:0000344!2.31e-07!15;UBERON:0002108!5.13e-07!16;UBERON:0004923!9.17e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.45e-17,47;UBERON:0000160,6.58e-12,31;UBERON:0000344,2.63e-08,15;UBERON:0004119,6.77e-08,118;UBERON:0000925,6.77e-08,118;UBERON:0006595,6.77e-08,118;UBERON:0001007,7.45e-08,116;UBERON:0001555,7.45e-08,116;UBERON:0007026,7.45e-08,116;UBERON:0004921,5.61e-07,114;UBERON:0001242,8.41e-07,13;UBERON:0001262,8.41e-07,13;UBERON:0004786,8.41e-07,13|phase1_expression=0,1.74487703819681,1.81999695755814,0.30246421130683,1.00179145989269,15.4448930158939,15.8856595604957,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,6.07971206614945,4.81759490241057,1.72269589234506,6.8921919385452,5.38678081714723,13.4916627814025,7.81293402255785,5.98672378769323,0,0,0,2.3108129580102,0.997407872150954,1.22501613757421,0,0,0.523523743973798,0,0,0,0,0,0.183546752161682,0,0.436050312760893,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.589257170947335,0.427115042397309,0,0.075726193333184,0.0755715601067855,3.76823835312181,0.860423876981386,0,0,0,0,2.24711072210803,0.170430322578058,0,0,0.281686839553361,0,0,0,1.5154372870785,1.52015919285059,2.02209778005913,2.2836775943812,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0.883366073841574,1.45462575940567,13.0474232852686,0,0,4.34276993854605,0.239630249011841,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0,0,0,0.162241263067758,0,1.49288364732112,0,12.416069497302,0,0.229902104433473,0.180062129805349,1.20563854268572,0.204109497453984,0.12811372028485,0.281105173679186,6.98499100995342,0,0.189106080167819,0.175951124163949,0.43839146485515,1.94633074457919,6.61679116392116,9.05441400194951,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0.493679549740441,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.205809224758569,3.63460661282178,2.90895623329899,0,0.232236671860439,0.257734922644187,1.00841762311671,1.11189021922435,1.14135375667535,2.84717436926707,1.15289268306808,1.75934646160189,2.98434708061726,3.70431765526328,0.898819408654221,5.40345124686736,7.56736838366595,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0.701358198903186,0.189709611372772,0,0,0.123397163921801,0,1.33476084572875,0.786235980452812,0.449724224769707,1.01430060694251,0.72353147925725,1.2731292589071,0.863088412352432,0.648540907100142,0,0,0.744281895337007,0.312037673114561,0,0,0,0.369506380333209,0,0,0.509235257325564,0.234690248288502,0.670025029767263,0.714130922658041,0.975668239288994,1.10344600874334,0.44292937929755,0.956728611944923,2.29408640602033,1.03610989119537,0.433947175744535,0,0,0,0.275936746304732,0,0.35163505977661,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.164970122972535,1.32745138339963,0.242780636154981,0,3.20628635585027,4.72483028609236,3.3817866273832,2.32585463851399,3.63533729477506,2.13898427030833,6.32073515871632,8.4334886859999,2.06271086496374,0,0.720244376125241,0,0.643011105094777,0.177340233642274,0.535106452806212,0.164549020602121,0.608929898229199,0.469343416127421,1.0591603543191,9.92377791247329,5.7710188529518,8.23468576149118,6.75504759195346,3.46179797609096,4.92422699235184,4.37221254944776,0.18542530201051,0.512612642393558,0.619160603889667,1.85194527369712,1.13021074202815,0.27338845544205,0.228778173206523,1.5298058699447,0.559805809294632,0.138199973804424,49.6428721367859,0.158167996790568,2.84647253977588,4.32021363287205,10.245326504709,17.6873676634404,15.1048067950999,16.7786515122432,33.2430046319718,3.24037433229482,3.72803587852155,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,17.9117003056017,0,0,0,11.5913756419314,0.187682475451182,1.09890974560359,27.6535209011995,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,1.2869045591501,1.33348036680969,1.03017528619447,1.28367683836726,1.01078884705519,2.5347929989024,1.13175804831646,1.03005658216871,0.704276676453562,1.32101578597911,1.42888107384922,0.695305955669133,0.77163688185482,0.412085900803307,0.735994600671987,1.71434626192708,1.95223386775271,1.66905332963125,1.0174249164263,1.2234219453993,1.26921911837515,1.09756783723664,0.789209134313529,1.62964936615034,1.12228454331548,1.30498519936592,1.18205378850676,0.818462086339379,0.929621047115796,2.89359916471712,1.24905288968973,2.33931608445408,3.43793686477277,2.29545998482612,1.32354851471709,0.463735671240843|short_description=p3@Rab27b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:80718 | |||
|HGNC= | |||
|MCL_coexpression_id=1168 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q549X4,uniprot:Q99P58,uniprot:Q05D38 | |||
|association_with_transcript=37bp_to_NM_030554,uc008fnz.1,uc012beo.1,uc012bep.1_5end | |||
|cluster_id=chr18:70212951..70212985,- | |||
|description=CAGE_peak_3_at_Rab27b_5end | |||
|id=chr18:70212951..70212985,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.05e-20!59;UBERON:0000160!2.16e-14!43;UBERON:0004119!7.18e-12!130;UBERON:0000925!7.18e-12!130;UBERON:0006595!7.18e-12!130;UBERON:0001007!1.52e-11!128;UBERON:0001555!1.52e-11!128;UBERON:0007026!1.52e-11!128;UBERON:0004921!1.16e-10!126;UBERON:0004185!1.16e-10!126;UBERON:0000344!2.31e-07!15;UBERON:0002108!5.13e-07!16;UBERON:0004923!9.17e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.45e-17,47;UBERON:0000160,6.58e-12,31;UBERON:0000344,2.63e-08,15;UBERON:0004119,6.77e-08,118;UBERON:0000925,6.77e-08,118;UBERON:0006595,6.77e-08,118;UBERON:0001007,7.45e-08,116;UBERON:0001555,7.45e-08,116;UBERON:0007026,7.45e-08,116;UBERON:0004921,5.61e-07,114;UBERON:0001242,8.41e-07,13;UBERON:0001262,8.41e-07,13;UBERON:0004786,8.41e-07,13 | |||
|phase1_expression=0,1.74487703819681,1.81999695755814,0.30246421130683,1.00179145989269,15.4448930158939,15.8856595604957,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,6.07971206614945,4.81759490241057,1.72269589234506,6.8921919385452,5.38678081714723,13.4916627814025,7.81293402255785,5.98672378769323,0,0,0,2.3108129580102,0.997407872150954,1.22501613757421,0,0,0.523523743973798,0,0,0,0,0,0.183546752161682,0,0.436050312760893,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.589257170947335,0.427115042397309,0,0.075726193333184,0.0755715601067855,3.76823835312181,0.860423876981386,0,0,0,0,2.24711072210803,0.170430322578058,0,0,0.281686839553361,0,0,0,1.5154372870785,1.52015919285059,2.02209778005913,2.2836775943812,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0.883366073841574,1.45462575940567,13.0474232852686,0,0,4.34276993854605,0.239630249011841,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0,0,0,0.162241263067758,0,1.49288364732112,0,12.416069497302,0,0.229902104433473,0.180062129805349,1.20563854268572,0.204109497453984,0.12811372028485,0.281105173679186,6.98499100995342,0,0.189106080167819,0.175951124163949,0.43839146485515,1.94633074457919,6.61679116392116,9.05441400194951,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0.493679549740441,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.205809224758569,3.63460661282178,2.90895623329899,0,0.232236671860439,0.257734922644187,1.00841762311671,1.11189021922435,1.14135375667535,2.84717436926707,1.15289268306808,1.75934646160189,2.98434708061726,3.70431765526328,0.898819408654221,5.40345124686736,7.56736838366595,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0.701358198903186,0.189709611372772,0,0,0.123397163921801,0,1.33476084572875,0.786235980452812,0.449724224769707,1.01430060694251,0.72353147925725,1.2731292589071,0.863088412352432,0.648540907100142,0,0,0.744281895337007,0.312037673114561,0,0,0,0.369506380333209,0,0,0.509235257325564,0.234690248288502,0.670025029767263,0.714130922658041,0.975668239288994,1.10344600874334,0.44292937929755,0.956728611944923,2.29408640602033,1.03610989119537,0.433947175744535,0,0,0,0.275936746304732,0,0.35163505977661,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.164970122972535,1.32745138339963,0.242780636154981,0,3.20628635585027,4.72483028609236,3.3817866273832,2.32585463851399,3.63533729477506,2.13898427030833,6.32073515871632,8.4334886859999,2.06271086496374,0,0.720244376125241,0,0.643011105094777,0.177340233642274,0.535106452806212,0.164549020602121,0.608929898229199,0.469343416127421,1.0591603543191,9.92377791247329,5.7710188529518,8.23468576149118,6.75504759195346,3.46179797609096,4.92422699235184,4.37221254944776,0.18542530201051,0.512612642393558,0.619160603889667,1.85194527369712,1.13021074202815,0.27338845544205,0.228778173206523,1.5298058699447,0.559805809294632,0.138199973804424,49.6428721367859,0.158167996790568,2.84647253977588,4.32021363287205,10.245326504709,17.6873676634404,15.1048067950999,16.7786515122432,33.2430046319718,3.24037433229482,3.72803587852155,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,17.9117003056017,0,0,0,11.5913756419314,0.187682475451182,1.09890974560359,27.6535209011995,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,1.2869045591501,1.33348036680969,1.03017528619447,1.28367683836726,1.01078884705519,2.5347929989024,1.13175804831646,1.03005658216871,0.704276676453562,1.32101578597911,1.42888107384922,0.695305955669133,0.77163688185482,0.412085900803307,0.735994600671987,1.71434626192708,1.95223386775271,1.66905332963125,1.0174249164263,1.2234219453993,1.26921911837515,1.09756783723664,0.789209134313529,1.62964936615034,1.12228454331548,1.30498519936592,1.18205378850676,0.818462086339379,0.929621047115796,2.89359916471712,1.24905288968973,2.33931608445408,3.43793686477277,2.29545998482612,1.32354851471709,0.463735671240843 | |||
|short_description=p3@Rab27b | |||
}} |
Revision as of 02:27, 6 August 2015
Short description: | p3@Rab27b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rab27b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1168 |
Association with transcript: | 37bp_to_NM_030554, uc008fnz.1, uc012beo.1, uc012bep.1_5end |
EntrezGene: | 80718 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 6.45e-17 | 47 |
intestine | 6.58e-12 | 31 |
mucosa | 2.63e-08 | 15 |
endoderm-derived structure | 6.77e-08 | 118 |
endoderm | 6.77e-08 | 118 |
presumptive endoderm | 6.77e-08 | 118 |
digestive system | 7.45e-08 | 116 |
digestive tract | 7.45e-08 | 116 |
primitive gut | 7.45e-08 | 116 |
subdivision of digestive tract | 5.61e-07 | 114 |
intestinal mucosa | 8.41e-07 | 13 |
wall of intestine | 8.41e-07 | 13 |
gastrointestinal system mucosa | 8.41e-07 | 13 |