FFCP PHASE1:Mm9::chr19:10140180..10140221,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:10140180..10140221,-|id=chr19:10140180..10140221,-|ontology_enrichment_celltype=CL:0002563!3.87e-08!9;CL:0002251!3.87e-08!9|ontology_enrichment_celltype_v019_2=CL:0000682,1.03e-11,3;CL:0002563,9.93e-07,9;CL:0002251,9.93e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.13e-19!43;UBERON:0005409!7.88e-15!59;UBERON:0000344!8.87e-13!15;UBERON:0001242!1.48e-10!13;UBERON:0000060!1.48e-10!13;UBERON:0001262!1.48e-10!13;UBERON:0004786!1.48e-10!13;UBERON:0003350!3.87e-08!9;UBERON:0004808!3.87e-08!9;UBERON:0001277!3.87e-08!9;UBERON:0000485!1.26e-07!11;UBERON:0001007!5.32e-07!128;UBERON:0001555!5.32e-07!128;UBERON:0007026!5.32e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.43e-23,31;UBERON:0000344,6.15e-20,15;UBERON:0002108,3.45e-17,4;UBERON:0005409,2.24e-16,47;UBERON:0001242,4.73e-14,13;UBERON:0001262,4.73e-14,13;UBERON:0004786,4.73e-14,13;UBERON:0000331,1.80e-13,3;UBERON:0002116,1.80e-13,3;UBERON:0001204,1.80e-13,3;UBERON:0001168,1.80e-13,3;UBERON:0004923,5.97e-12,24;UBERON:0001155,3.48e-09,2;UBERON:0000059,3.48e-09,2;UBERON:0001962,6.59e-09,2;UBERON:0001961,6.59e-09,2;UBERON:0001744,6.59e-09,2;UBERON:0001007,7.17e-07,116;UBERON:0001555,7.17e-07,116;UBERON:0007026,7.17e-07,116;UBERON:0003350,9.93e-07,9;UBERON:0004808,9.93e-07,9;UBERON:0001277,9.93e-07,9|phase1_expression=0,1.74487703819681,3.18499467572675,0.90739263392049,0,2.35030980676646,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,3.19984845586813,6.19405058881359,3.44539178469012,1.7230479846363,1.50829862880122,26.0332084655232,14.1136872665561,6.65191531965914,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0,0,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0,0.209446706813455,6.89734049063197,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0,0,0.528901133327089,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,4.2707615539006,0.988193728344065,0.754005626400808,0.795825888164603,0.779856348476481,7.19055526923377,3.24207074812041,6.57166201739412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,3.39956859987711,1.95932033253121,2.48759952847963,0,0.158167996790568,0,0,0,0.218362563746178,0,0.0826534557253359,0,1.68499465279331,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0|short_description=p@chr19:10140180..10140221,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:10140180..10140221,- | |||
|description=CAGE_peak_at_chr19:10140180..10140221,- | |||
|id=chr19:10140180..10140221,- | |||
|ontology_enrichment_celltype=CL:0002563!3.87e-08!9;CL:0002251!3.87e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.03e-11,3;CL:0002563,9.93e-07,9;CL:0002251,9.93e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.13e-19!43;UBERON:0005409!7.88e-15!59;UBERON:0000344!8.87e-13!15;UBERON:0001242!1.48e-10!13;UBERON:0000060!1.48e-10!13;UBERON:0001262!1.48e-10!13;UBERON:0004786!1.48e-10!13;UBERON:0003350!3.87e-08!9;UBERON:0004808!3.87e-08!9;UBERON:0001277!3.87e-08!9;UBERON:0000485!1.26e-07!11;UBERON:0001007!5.32e-07!128;UBERON:0001555!5.32e-07!128;UBERON:0007026!5.32e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.43e-23,31;UBERON:0000344,6.15e-20,15;UBERON:0002108,3.45e-17,4;UBERON:0005409,2.24e-16,47;UBERON:0001242,4.73e-14,13;UBERON:0001262,4.73e-14,13;UBERON:0004786,4.73e-14,13;UBERON:0000331,1.80e-13,3;UBERON:0002116,1.80e-13,3;UBERON:0001204,1.80e-13,3;UBERON:0001168,1.80e-13,3;UBERON:0004923,5.97e-12,24;UBERON:0001155,3.48e-09,2;UBERON:0000059,3.48e-09,2;UBERON:0001962,6.59e-09,2;UBERON:0001961,6.59e-09,2;UBERON:0001744,6.59e-09,2;UBERON:0001007,7.17e-07,116;UBERON:0001555,7.17e-07,116;UBERON:0007026,7.17e-07,116;UBERON:0003350,9.93e-07,9;UBERON:0004808,9.93e-07,9;UBERON:0001277,9.93e-07,9 | |||
|phase1_expression=0,1.74487703819681,3.18499467572675,0.90739263392049,0,2.35030980676646,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,3.19984845586813,6.19405058881359,3.44539178469012,1.7230479846363,1.50829862880122,26.0332084655232,14.1136872665561,6.65191531965914,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0,0,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0,0.209446706813455,6.89734049063197,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0,0,0.528901133327089,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,4.2707615539006,0.988193728344065,0.754005626400808,0.795825888164603,0.779856348476481,7.19055526923377,3.24207074812041,6.57166201739412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,3.39956859987711,1.95932033253121,2.48759952847963,0,0.158167996790568,0,0,0,0.218362563746178,0,0.0826534557253359,0,1.68499465279331,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr19:10140180..10140221,- | |||
}} |
Latest revision as of 06:03, 6 August 2015
Short description: | p@chr19:10140180..10140221, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:10140180..10140221, - |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.03e-11 | 3 |
intestinal epithelial cell | 9.93e-07 | 9 |
epithelial cell of alimentary canal | 9.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.43e-23 | 31 |
mucosa | 6.15e-20 | 15 |
small intestine | 3.45e-17 | 4 |
gastrointestinal system | 2.24e-16 | 47 |
intestinal mucosa | 4.73e-14 | 13 |
wall of intestine | 4.73e-14 | 13 |
gastrointestinal system mucosa | 4.73e-14 | 13 |
ileal mucosa | 1.80e-13 | 3 |
ileum | 1.80e-13 | 3 |
mucosa of small intestine | 1.80e-13 | 3 |
wall of small intestine | 1.80e-13 | 3 |
organ component layer | 5.97e-12 | 24 |
colon | 3.48e-09 | 2 |
large intestine | 3.48e-09 | 2 |
gut-associated lymphoid tissue | 6.59e-09 | 2 |
mucosa-associated lymphoid tissue | 6.59e-09 | 2 |
lymphoid tissue | 6.59e-09 | 2 |
digestive system | 7.17e-07 | 116 |
digestive tract | 7.17e-07 | 116 |
primitive gut | 7.17e-07 | 116 |
epithelium of mucosa | 9.93e-07 | 9 |
gastrointestinal system epithelium | 9.93e-07 | 9 |
intestinal epithelium | 9.93e-07 | 9 |