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FFCP PHASE1:Mm9::chr19:17211234..17211271,+: Difference between revisions

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{{FFCP|EntrezGene=353211|HGNC=|MCL_coexpression_id=39|UniProt=Q52KR3,Q3TQH7|association_with_transcript=0bp_to_ENSMUST00000044176,ENSMUST00000099594,uc008gxi.1,uc008gxj.2,uc008gxk.2_5end|description=CAGE_peak_1_at_Prune2_5end|id=chr19:17211234..17211271,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.95e-20!102;UBERON:0000924!1.95e-20!102;UBERON:0006601!1.95e-20!102;UBERON:0000073!2.63e-20!75;UBERON:0001016!2.63e-20!75;UBERON:0001017!3.30e-20!73;UBERON:0005743!3.30e-20!73;UBERON:0000033!3.42e-20!63;UBERON:0002346!1.68e-18!71;UBERON:0003075!1.68e-18!71;UBERON:0007284!1.68e-18!71;UBERON:0001049!7.30e-18!52;UBERON:0005068!7.30e-18!52;UBERON:0006241!7.30e-18!52;UBERON:0007135!7.30e-18!52;UBERON:0000955!1.31e-17!50;UBERON:0006238!1.31e-17!50;UBERON:0002616!6.47e-17!49;UBERON:0003056!4.82e-16!49;UBERON:0003080!2.84e-13!40;UBERON:0002780!1.27e-12!39;UBERON:0001890!1.27e-12!39;UBERON:0006240!1.27e-12!39;UBERON:0002020!2.03e-10!34;UBERON:0002791!2.54e-08!29;UBERON:0003528!2.54e-08!29;UBERON:0001893!2.54e-08!29;UBERON:0004111!1.39e-07!122;UBERON:0000025!2.25e-07!114;UBERON:0002021!4.52e-07!10;UBERON:0000411!4.52e-07!10;UBERON:0001950!4.52e-07!10;UBERON:0007811!6.66e-07!86;UBERON:0000468!9.06e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.91e-23,92;UBERON:0001017,6.87e-20,73;UBERON:0001016,1.20e-19,75;UBERON:0004121,2.46e-19,95;UBERON:0000924,2.46e-19,95;UBERON:0006601,2.46e-19,95;UBERON:0000073,2.74e-19,54;UBERON:0002346,8.38e-19,64;UBERON:0003075,8.38e-19,64;UBERON:0007284,8.38e-19,64;UBERON:0001049,1.02e-17,52;UBERON:0005068,1.02e-17,52;UBERON:0006241,1.02e-17,52;UBERON:0007135,1.02e-17,52;UBERON:0010371,5.48e-17,73;UBERON:0003056,2.21e-16,49;UBERON:0000955,2.98e-15,47;UBERON:0006238,2.98e-15,47;UBERON:0002616,1.58e-14,46;UBERON:0003080,2.76e-13,40;UBERON:0002780,1.40e-12,39;UBERON:0001890,1.40e-12,39;UBERON:0006240,1.40e-12,39;UBERON:0002020,3.61e-10,34;UBERON:0003528,6.80e-08,29;UBERON:0002791,6.80e-08,29;UBERON:0001893,6.80e-08,29;UBERON:0002021,8.80e-08,10;UBERON:0000411,8.80e-08,10;UBERON:0001950,8.80e-08,10;UBERON:0000025,2.47e-07,114;UBERON:0004111,3.94e-07,122|phase1_expression=8.16759120234449,0,0.454999239389536,0,0,1.17515490338323,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,15.6479653877968,0,0,0,0.68822784320151,0,0.86152399231815,0.646413698057667,1.52018735565099,0.504060259519861,1.33038306393183,0,0,0,0.577703239502549,0.498703936075477,0,0,0.7813353445238,0,0,0,0,0.881277725829041,0.202753862439029,0.550640256485045,0.782391344348039,0.65407546914134,0.219686182734472,0.777719596297134,1.53985063787899,2.87505128729943,0,0,0,0,1.71920063963254,1.03134418455488,3.84401275633236,4.23192783417626,1.90149421051854,0.338844532069132,0,4.04954872776629,9.88866362566974,2.8419204597844,2.39680088414724,3.07374644257244,0.622137673850866,0.945041568321835,0.210324961351382,9.42648248532552,8.39300455616131,1.46988959057945,1.15014565221884,0.919218786610021,60.5637345496638,74.1863434274941,69.2765464985658,4.2203612073662,4.48289453651807,5.2091337055676,40.2023518561989,48.9603470727562,62.6472815884921,15.0260578591571,15.0913981647049,6.71038004971082,0.832988126665025,4.53429360640713,1.15945795480671,0,0,0,0,0,2.52799956237153,0,0,0,11.8308472612412,0,2.54805239706646,0,0.216491041011214,0,0.505524445014783,1.94112595522402,5.43769555659061,2.07818994690755,1.73485326766136,1.21786191324856,0.922461989024234,1.3565037649736,2.23418543557839,0.628332956648377,0,2.16899035379867,0.884610551949874,0.485300549842228,0.220841518460394,0.484875253135222,0,143.75537133267,155.409456455584,1.27728527604296,0.239630249011841,0,0.508280908292259,77.8911324905078,48.4950638987744,6.53402630986895,65.1841200721037,48.8416523500931,71.6868753730482,55.3242707061054,1.83310854930569,2.11491850037158,10.867078612648,11.995185785529,2.47228841629137,2.5289231487682,1.26043490863744,3.16480117455002,7.55205140579739,9.09607414022434,7.49613796477831,22.2484898835553,0.431135985865684,0.378212160335639,0.703804496655795,0.219195732427575,0.278047249225598,0.696504333044333,1.4404749548556,0.59710280045548,0,0,0.568326998791185,9.94203708170409,11.9608290590359,9.7233513188948,10.180023630164,12.9864392953287,12.0328348052155,12.556833016522,9.65784245038629,9.45799273174073,4.60767579757745,3.11918181750281,2.10778904819225,2.48539978623065,0.878200461164203,2.28150911892632,42.899149507082,4.42489833230923,0.330418782983798,1.32225283331772,1.2797295032114,0.928946687441754,0.902072229254653,1.00841762311671,0.889512175379481,0.760902504450237,0.949058123089023,1.15289268306808,2.01068167040216,3.18330355265841,1.55971269695296,1.79763881730844,1.29682829924817,0.398282546508734,0.569003702859245,1.5994791765362,1.1270773567308,0.407302655690628,2.13347735884388,1.54298803758701,1.83385957660346,1.03327103585722,2.511979645462,0.740382983530803,0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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:353211
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=uniprot:Q52KR3,uniprot:Q3TQH7
|association_with_transcript=0bp_to_ENSMUST00000044176,ENSMUST00000099594,uc008gxi.1,uc008gxj.2,uc008gxk.2_5end
|cluster_id=chr19:17211234..17211271,+
|description=CAGE_peak_1_at_Prune2_5end
|id=chr19:17211234..17211271,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.95e-20!102;UBERON:0000924!1.95e-20!102;UBERON:0006601!1.95e-20!102;UBERON:0000073!2.63e-20!75;UBERON:0001016!2.63e-20!75;UBERON:0001017!3.30e-20!73;UBERON:0005743!3.30e-20!73;UBERON:0000033!3.42e-20!63;UBERON:0002346!1.68e-18!71;UBERON:0003075!1.68e-18!71;UBERON:0007284!1.68e-18!71;UBERON:0001049!7.30e-18!52;UBERON:0005068!7.30e-18!52;UBERON:0006241!7.30e-18!52;UBERON:0007135!7.30e-18!52;UBERON:0000955!1.31e-17!50;UBERON:0006238!1.31e-17!50;UBERON:0002616!6.47e-17!49;UBERON:0003056!4.82e-16!49;UBERON:0003080!2.84e-13!40;UBERON:0002780!1.27e-12!39;UBERON:0001890!1.27e-12!39;UBERON:0006240!1.27e-12!39;UBERON:0002020!2.03e-10!34;UBERON:0002791!2.54e-08!29;UBERON:0003528!2.54e-08!29;UBERON:0001893!2.54e-08!29;UBERON:0004111!1.39e-07!122;UBERON:0000025!2.25e-07!114;UBERON:0002021!4.52e-07!10;UBERON:0000411!4.52e-07!10;UBERON:0001950!4.52e-07!10;UBERON:0007811!6.66e-07!86;UBERON:0000468!9.06e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.91e-23,92;UBERON:0001017,6.87e-20,73;UBERON:0001016,1.20e-19,75;UBERON:0004121,2.46e-19,95;UBERON:0000924,2.46e-19,95;UBERON:0006601,2.46e-19,95;UBERON:0000073,2.74e-19,54;UBERON:0002346,8.38e-19,64;UBERON:0003075,8.38e-19,64;UBERON:0007284,8.38e-19,64;UBERON:0001049,1.02e-17,52;UBERON:0005068,1.02e-17,52;UBERON:0006241,1.02e-17,52;UBERON:0007135,1.02e-17,52;UBERON:0010371,5.48e-17,73;UBERON:0003056,2.21e-16,49;UBERON:0000955,2.98e-15,47;UBERON:0006238,2.98e-15,47;UBERON:0002616,1.58e-14,46;UBERON:0003080,2.76e-13,40;UBERON:0002780,1.40e-12,39;UBERON:0001890,1.40e-12,39;UBERON:0006240,1.40e-12,39;UBERON:0002020,3.61e-10,34;UBERON:0003528,6.80e-08,29;UBERON:0002791,6.80e-08,29;UBERON:0001893,6.80e-08,29;UBERON:0002021,8.80e-08,10;UBERON:0000411,8.80e-08,10;UBERON:0001950,8.80e-08,10;UBERON:0000025,2.47e-07,114;UBERON:0004111,3.94e-07,122
|phase1_expression=8.16759120234449,0,0.454999239389536,0,0,1.17515490338323,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,15.6479653877968,0,0,0,0.68822784320151,0,0.86152399231815,0.646413698057667,1.52018735565099,0.504060259519861,1.33038306393183,0,0,0,0.577703239502549,0.498703936075477,0,0,0.7813353445238,0,0,0,0,0.881277725829041,0.202753862439029,0.550640256485045,0.782391344348039,0.65407546914134,0.219686182734472,0.777719596297134,1.53985063787899,2.87505128729943,0,0,0,0,1.71920063963254,1.03134418455488,3.84401275633236,4.23192783417626,1.90149421051854,0.338844532069132,0,4.04954872776629,9.88866362566974,2.8419204597844,2.39680088414724,3.07374644257244,0.622137673850866,0.945041568321835,0.210324961351382,9.42648248532552,8.39300455616131,1.46988959057945,1.15014565221884,0.919218786610021,60.5637345496638,74.1863434274941,69.2765464985658,4.2203612073662,4.48289453651807,5.2091337055676,40.2023518561989,48.9603470727562,62.6472815884921,15.0260578591571,15.0913981647049,6.71038004971082,0.832988126665025,4.53429360640713,1.15945795480671,0,0,0,0,0,2.52799956237153,0,0,0,11.8308472612412,0,2.54805239706646,0,0.216491041011214,0,0.505524445014783,1.94112595522402,5.43769555659061,2.07818994690755,1.73485326766136,1.21786191324856,0.922461989024234,1.3565037649736,2.23418543557839,0.628332956648377,0,2.16899035379867,0.884610551949874,0.485300549842228,0.220841518460394,0.484875253135222,0,143.75537133267,155.409456455584,1.27728527604296,0.239630249011841,0,0.508280908292259,77.8911324905078,48.4950638987744,6.53402630986895,65.1841200721037,48.8416523500931,71.6868753730482,55.3242707061054,1.83310854930569,2.11491850037158,10.867078612648,11.995185785529,2.47228841629137,2.5289231487682,1.26043490863744,3.16480117455002,7.55205140579739,9.09607414022434,7.49613796477831,22.2484898835553,0.431135985865684,0.378212160335639,0.703804496655795,0.219195732427575,0.278047249225598,0.696504333044333,1.4404749548556,0.59710280045548,0,0,0.568326998791185,9.94203708170409,11.9608290590359,9.7233513188948,10.180023630164,12.9864392953287,12.0328348052155,12.556833016522,9.65784245038629,9.45799273174073,4.60767579757745,3.11918181750281,2.10778904819225,2.48539978623065,0.878200461164203,2.28150911892632,42.899149507082,4.42489833230923,0.330418782983798,1.32225283331772,1.2797295032114,0.928946687441754,0.902072229254653,1.00841762311671,0.889512175379481,0.760902504450237,0.949058123089023,1.15289268306808,2.01068167040216,3.18330355265841,1.55971269695296,1.79763881730844,1.29682829924817,0.398282546508734,0.569003702859245,1.5994791765362,1.1270773567308,0.407302655690628,2.13347735884388,1.54298803758701,1.83385957660346,1.03327103585722,2.511979645462,0.740382983530803,0.296452627087149,0.500535317148282,0.393117990226406,0.674586337154561,0.202860121388503,0,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0.739012760666419,0.757965647081939,0.977789858652155,1.52770577197669,0.234690248288502,0.502518772325447,0,0.390267295715598,0.315270288212382,0,0.478364305972461,0.163863314715738,0.518054945597687,0.578596234326046,10.5553898757491,14.1415477792864,0.491764273019036,1.10374698521893,45.2752663765573,44.423229218445,0.163934945376675,0.252470927204373,0.631016438832513,0.390438744296638,0.215423397732799,0.716906393857656,1.78238939265915,1.41538265394416,1.21443210502468,1.75353514746787,1.58115111178609,126.600598670192,2.83880170416537,1.42452482933804,2.28041743095006,5.27904393512113,2.65490276679926,2.6705869977048,4.23252979750651,4.71512699389745,2.36241514304618,3.3817866273832,5.16856586336442,6.90714086007261,4.9909632973861,2.52829406348653,1.05418608574999,1.03135543248187,52.7681388918371,3.24109969256358,3.23396709456886,6.85878512101095,8.33499098118686,9.63191615051181,10.0374902567294,8.82948352432338,0,0,0.882113592219848,1.6488625294148,1.13025098687134,0.784068024066026,0.596861720015682,0.656563598980245,0.291480836629851,40.0518652342701,0.170870880797853,0.412773735926445,0.555583582109135,0,0,0.686334519619568,1.5298058699447,1.53946597556024,0.690999869022119,0.954670618015114,0.949007980743406,1.21991680276109,0.756037385752609,0.418176592028937,0.655087691238533,1.21377911746339,0.661227645802687,1.83229159388821,1.94422459937689,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0,0.337912250981556,0.117357238645754,0.13020438484395,0.524296722128554,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0.228620419965,0,0.38983152295901,0.288635524920988,0,0.906921534460845,0,0,0,3.09103350451505,1.87682475451182,1.09890974560359,0.857473516316263,1.00314420807073,20.8958181768315,26.6988637174163,18.9055519435001,32.995811009988,39.0497036269266,58.9207239963966,38.4762825132129,47.7340475417674,59.3616555769308,37.7965027578829,0.726511433089237,0.798049746802062,0.682934423016537,0.972426868273176,1.04806581313991,1.47074806760011,1.55572709461131,1.85431551515005,1.92551525755089,2.02157769411038,1.52087579934144,2.26351609663291,2.34103768674706,3.20125762024346,2.64203157195821,3.33405583898152,1.50649623728312,2.50781986602817,2.06042950401653,1.91358596174717,1.02860775715625,1.77475806159337,3.33810665926249,1.59881058295561,2.07040636913727,2.19997980518359,1.64635175585495,0.789209134313529,0.814824683075171,3.36685362994643,1.42362021749009,2.56111654176465,1.22769312950907,2.32405261778949,2.50778594275484,2.24829520144151,1.16965804222704,1.71896843238639,1.72159498861959,1.76473135295612,0.927471342481686
|short_description=p1@Prune2
}}

Revision as of 08:54, 6 August 2015

Short description:p1@Prune2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Prune2_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 0bp_to_ENSMUST00000044176, ENSMUST00000099594, uc008gxi.1, uc008gxj.2, uc008gxk.2_5end
EntrezGene:353211
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Prune2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D360.56
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F374.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D769.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E440.20
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E548.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I662.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F94.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H95.44
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2143.76
cerebellum, neonate N30.CNhs11135.1395-42I2155.41
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A477.89
corpus striatum, adult.CNhs10487.19-21D848.50
corpus striatum, neonate N00.CNhs11226.630-43F16.53
cortex, adult.CNhs10473.12-14D565.18
cortex, neonate N30.CNhs11107.1392-42F248.84
diencephalon, adult.CNhs10482.20-12F271.69
diencephalon, neonate N30.CNhs11201.1388-42B255.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B210.87
eyeball, adult.CNhs10484.31-12G412.00
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C67.55
eyeball, neonate N01.CNhs11140.1532-43E79.10
eyeball, neonate N02.CNhs11205.1551-44G87.50
eyeball, neonate N16.CNhs11188.777-19A222.25
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E99.94
heart, embryo E12.CNhs11015.353-12F511.96
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D410.18
heart, embryo E15.CNhs11017.431-16C812.99
heart, embryo E16.CNhs11021.457-17C612.03
heart, embryo E17.CNhs11025.479-18E512.56
heart, embryo E18.CNhs11030.1283-20G39.66
heart, neonate N00.CNhs11213.639-21E39.46
heart, neonate N03.CNhs11221.1349-25I24.61
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G12.11
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E842.90
hippocampus, neonate N00.CNhs11228.627-43G14.42
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C245.28
medulla oblongata, neonate N30.CNhs11200.1396-42A344.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I9126.60
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G852.77
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B98.33
pituitary gland, embryo E16.CNhs11036.449-43F69.63
pituitary gland, embryo E17.CNhs11039.1265-44F510.04
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C940.05
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.05
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A558.92
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A638.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A747.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A859.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.80
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest2.91e-2392
central nervous system6.87e-2073
nervous system1.20e-1975
ectoderm-derived structure2.46e-1995
ectoderm2.46e-1995
presumptive ectoderm2.46e-1995
regional part of nervous system2.74e-1954
neurectoderm8.38e-1964
neural plate8.38e-1964
presumptive neural plate8.38e-1964
neural tube1.02e-1752
neural rod1.02e-1752
future spinal cord1.02e-1752
neural keel1.02e-1752
ecto-epithelium5.48e-1773
pre-chordal neural plate2.21e-1649
brain2.98e-1547
future brain2.98e-1547
regional part of brain1.58e-1446
anterior neural tube2.76e-1340
regional part of forebrain1.40e-1239
forebrain1.40e-1239
future forebrain1.40e-1239
gray matter3.61e-1034
brain grey matter6.80e-0829
regional part of telencephalon6.80e-0829
telencephalon6.80e-0829
occipital lobe8.80e-0810
visual cortex8.80e-0810
neocortex8.80e-0810
tube2.47e-07114
anatomical conduit3.94e-07122
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