FFCP PHASE1:Mm9::chr19:43785907..43785950,+: Difference between revisions
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{{FFCP|EntrezGene=93685|HGNC=|MCL_coexpression_id=191|UniProt=|association_with_transcript=5bp_to_ENSMUST00000134481_5end|description=CAGE_peak_5_at_Entpd7_5end|id=chr19:43785907..43785950,+|ontology_enrichment_celltype=CL:0000239!8.91e-09!6;CL:0000677!8.91e-09!6;CL:0000212!8.91e-09!6;CL:0000584!8.91e-09!6;CL:0000075!2.50e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,5.51e-24,6;CL:0000677,5.51e-24,6;CL:0000584,5.51e-24,6;CL:0000075,1.68e-20,7;CL:0002563,7.55e-16,9;CL:0002251,7.55e-16,9;CL:0000682,1.99e-13,3;CL:0000066,4.44e-12,25;CL:0002076,2.59e-09,15;CL:0000223,7.45e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.55e-13!43;UBERON:0005409!2.28e-13!59;UBERON:0000344!4.66e-12!15;UBERON:0004119!3.33e-11!130;UBERON:0000925!3.33e-11!130;UBERON:0006595!3.33e-11!130;UBERON:0001007!3.59e-10!128;UBERON:0001555!3.59e-10!128;UBERON:0007026!3.59e-10!128;UBERON:0004923!9.76e-10!24;UBERON:0001242!1.42e-09!13;UBERON:0000060!1.42e-09!13;UBERON:0001262!1.42e-09!13;UBERON:0004786!1.42e-09!13;UBERON:0004921!7.39e-09!126;UBERON:0004185!7.39e-09!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.41e-37,15;UBERON:0000160,1.59e-30,31;UBERON:0001242,3.72e-29,13;UBERON:0001262,3.72e-29,13;UBERON:0004786,3.72e-29,13;UBERON:0004923,1.93e-22,24;UBERON:0005409,3.22e-19,47;UBERON:0002108,7.43e-16,4;UBERON:0003350,7.55e-16,9;UBERON:0004808,7.55e-16,9;UBERON:0001277,7.55e-16,9;UBERON:0000485,6.99e-13,11;UBERON:0000331,3.52e-12,3;UBERON:0002116,3.52e-12,3;UBERON:0001204,3.52e-12,3;UBERON:0001168,3.52e-12,3;UBERON:0001962,5.74e-10,2;UBERON:0001961,5.74e-10,2;UBERON:0001744,5.74e-10,2;UBERON:0001007,1.58e-09,116;UBERON:0001555,1.58e-09,116;UBERON:0007026,1.58e-09,116;UBERON:0004119,2.60e-09,118;UBERON:0000925,2.60e-09,118;UBERON:0006595,2.60e-09,118;UBERON:0004921,2.94e-07,114;UBERON:0002465,6.65e-07,3|phase1_expression=0,3.48975407639361,4.09499315450582,2.41971369045464,1.00179145989269,1.17515490338323,1.63528848416868,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,8.15961356246374,6.65286915094793,2.8711598205751,2.58457197695445,3.01659725760245,1.14014051673824,1.51218077855958,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0,0,1.65209391491899,2.11560453330835,0,0,0.257734922644187,0.605050573870028,0.889512175379481,0.190225626112559,0,0.823494773620054,0.502670417600539,0.397912944082302,0,2.69645822596266,1.08069024937347,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0.322928853391811,0.301564624640779,0,0,2.04036585640896,0,0,0,0,0,0,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p5@Entpd7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:93685 | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENSMUST00000134481_5end | |||
|cluster_id=chr19:43785907..43785950,+ | |||
|description=CAGE_peak_5_at_Entpd7_5end | |||
|id=chr19:43785907..43785950,+ | |||
|ontology_enrichment_celltype=CL:0000239!8.91e-09!6;CL:0000677!8.91e-09!6;CL:0000212!8.91e-09!6;CL:0000584!8.91e-09!6;CL:0000075!2.50e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.51e-24,6;CL:0000677,5.51e-24,6;CL:0000584,5.51e-24,6;CL:0000075,1.68e-20,7;CL:0002563,7.55e-16,9;CL:0002251,7.55e-16,9;CL:0000682,1.99e-13,3;CL:0000066,4.44e-12,25;CL:0002076,2.59e-09,15;CL:0000223,7.45e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.55e-13!43;UBERON:0005409!2.28e-13!59;UBERON:0000344!4.66e-12!15;UBERON:0004119!3.33e-11!130;UBERON:0000925!3.33e-11!130;UBERON:0006595!3.33e-11!130;UBERON:0001007!3.59e-10!128;UBERON:0001555!3.59e-10!128;UBERON:0007026!3.59e-10!128;UBERON:0004923!9.76e-10!24;UBERON:0001242!1.42e-09!13;UBERON:0000060!1.42e-09!13;UBERON:0001262!1.42e-09!13;UBERON:0004786!1.42e-09!13;UBERON:0004921!7.39e-09!126;UBERON:0004185!7.39e-09!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.41e-37,15;UBERON:0000160,1.59e-30,31;UBERON:0001242,3.72e-29,13;UBERON:0001262,3.72e-29,13;UBERON:0004786,3.72e-29,13;UBERON:0004923,1.93e-22,24;UBERON:0005409,3.22e-19,47;UBERON:0002108,7.43e-16,4;UBERON:0003350,7.55e-16,9;UBERON:0004808,7.55e-16,9;UBERON:0001277,7.55e-16,9;UBERON:0000485,6.99e-13,11;UBERON:0000331,3.52e-12,3;UBERON:0002116,3.52e-12,3;UBERON:0001204,3.52e-12,3;UBERON:0001168,3.52e-12,3;UBERON:0001962,5.74e-10,2;UBERON:0001961,5.74e-10,2;UBERON:0001744,5.74e-10,2;UBERON:0001007,1.58e-09,116;UBERON:0001555,1.58e-09,116;UBERON:0007026,1.58e-09,116;UBERON:0004119,2.60e-09,118;UBERON:0000925,2.60e-09,118;UBERON:0006595,2.60e-09,118;UBERON:0004921,2.94e-07,114;UBERON:0002465,6.65e-07,3 | |||
|phase1_expression=0,3.48975407639361,4.09499315450582,2.41971369045464,1.00179145989269,1.17515490338323,1.63528848416868,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,8.15961356246374,6.65286915094793,2.8711598205751,2.58457197695445,3.01659725760245,1.14014051673824,1.51218077855958,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0,0,1.65209391491899,2.11560453330835,0,0,0.257734922644187,0.605050573870028,0.889512175379481,0.190225626112559,0,0.823494773620054,0.502670417600539,0.397912944082302,0,2.69645822596266,1.08069024937347,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0.322928853391811,0.301564624640779,0,0,2.04036585640896,0,0,0,0,0,0,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p5@Entpd7 | |||
}} |
Revision as of 03:31, 4 August 2015
Short description: | p5@Entpd7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Entpd7_5end |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | 5bp_to_ENSMUST00000134481_5end |
EntrezGene: | 93685 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.51e-24 | 6 |
gut absorptive cell | 5.51e-24 | 6 |
enterocyte | 5.51e-24 | 6 |
columnar/cuboidal epithelial cell | 1.68e-20 | 7 |
intestinal epithelial cell | 7.55e-16 | 9 |
epithelial cell of alimentary canal | 7.55e-16 | 9 |
M cell of gut | 1.99e-13 | 3 |
epithelial cell | 4.44e-12 | 25 |
endo-epithelial cell | 2.59e-09 | 15 |
endodermal cell | 7.45e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.41e-37 | 15 |
intestine | 1.59e-30 | 31 |
intestinal mucosa | 3.72e-29 | 13 |
wall of intestine | 3.72e-29 | 13 |
gastrointestinal system mucosa | 3.72e-29 | 13 |
organ component layer | 1.93e-22 | 24 |
gastrointestinal system | 3.22e-19 | 47 |
small intestine | 7.43e-16 | 4 |
epithelium of mucosa | 7.55e-16 | 9 |
gastrointestinal system epithelium | 7.55e-16 | 9 |
intestinal epithelium | 7.55e-16 | 9 |
simple columnar epithelium | 6.99e-13 | 11 |
ileal mucosa | 3.52e-12 | 3 |
ileum | 3.52e-12 | 3 |
mucosa of small intestine | 3.52e-12 | 3 |
wall of small intestine | 3.52e-12 | 3 |
gut-associated lymphoid tissue | 5.74e-10 | 2 |
mucosa-associated lymphoid tissue | 5.74e-10 | 2 |
lymphoid tissue | 5.74e-10 | 2 |
digestive system | 1.58e-09 | 116 |
digestive tract | 1.58e-09 | 116 |
primitive gut | 1.58e-09 | 116 |
endoderm-derived structure | 2.60e-09 | 118 |
endoderm | 2.60e-09 | 118 |
presumptive endoderm | 2.60e-09 | 118 |
subdivision of digestive tract | 2.94e-07 | 114 |
lymphoid system | 6.65e-07 | 3 |