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FFCP PHASE1:Mm9::chr19:44482373..44482391,-: Difference between revisions

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{{FFCP|EntrezGene=20249|HGNC=|MCL_coexpression_id=3198|UniProt=P13516,Q547C4|association_with_transcript=-174bp_to_ENSMUST00000041331,NM_009127,uc008hpr.2_5end|description=CAGE_peak_5_at_Scd1_5end|id=chr19:44482373..44482391,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!8.73e-09!122;UBERON:0002365!3.89e-08!25;UBERON:0002330!3.89e-08!25;UBERON:0000025!4.04e-08!114;UBERON:0004121!1.84e-07!102;UBERON:0000924!1.84e-07!102;UBERON:0006601!1.84e-07!102;UBERON:0000073!2.33e-07!75;UBERON:0001016!2.33e-07!75;UBERON:0001017!6.16e-07!73;UBERON:0005743!6.16e-07!73;UBERON:0009854!7.61e-07!23;UBERON:0009856!7.61e-07!23;UBERON:0002107!9.17e-07!22;UBERON:0007499!9.17e-07!22;UBERON:0006925!9.17e-07!22;UBERON:0009497!9.17e-07!22;UBERON:0000015!9.17e-07!22;UBERON:0002423!9.17e-07!22;UBERON:0006235!9.17e-07!22;UBERON:0008835!9.17e-07!22;UBERON:0003894!9.17e-07!22;UBERON:0004161!9.17e-07!22;UBERON:0008836!9.17e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.49e-08,25;UBERON:0002330,2.49e-08,25;UBERON:0004111,6.06e-08,122;UBERON:0000025,2.14e-07,114;UBERON:0009854,5.43e-07,23;UBERON:0009856,5.43e-07,23;UBERON:0004121,5.65e-07,95;UBERON:0000924,5.65e-07,95;UBERON:0006601,5.65e-07,95;UBERON:0001016,6.26e-07,75;UBERON:0002107,6.61e-07,22;UBERON:0007499,6.61e-07,22;UBERON:0006925,6.61e-07,22;UBERON:0009497,6.61e-07,22;UBERON:0000015,6.61e-07,22;UBERON:0002423,6.61e-07,22;UBERON:0006235,6.61e-07,22;UBERON:0008835,6.61e-07,22;UBERON:0003894,6.61e-07,22;UBERON:0004161,6.61e-07,22;UBERON:0008836,6.61e-07,22|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0.0797721589953364,0,0,8.32774404539157,10.9336644390506,4.89693314689703,45.5842828942653,45.1106486562881,41.590185876207,4.42225108785563,0.0992909512008853,0,3.03985603307473,4.12936705920906,0,0,0,0.190023419456374,0,0.221730510655305,1.90509202037889,4.92051830067656,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0,5.03587271902309,3.4468156614635,5.32285581268876,2.34717403304412,12.8634842264463,9.00713349211335,9.91592485278845,11.198913730029,14.3752564364972,57.0460860596304,0.725362142011344,1.34437519656986,6.17422646486273,1.43266719969378,3.09403255366465,1.21389876515759,1.05798195854407,0.633831403506179,4.06613438482959,5.33576877666684,0,0,0,4.19440154725767,5.76327457982332,0.414758449233911,0.675029691658453,0.630974884054146,7.7125765789027,6.40518768759679,1.22490799214954,1.62937300731002,1.83843757322004,18.7196997698961,21.7068474744819,26.7275367865864,1.05509030184155,1.82975287204819,1.56274011167028,17.0301629390842,12.9435400307286,16.3494125121187,5.59794312399969,3.27454865837937,0.745597783301202,3.7863096666592,9.44644501334819,0,14.6272059086836,50.3178786943735,56.6688351219708,61.7287596575286,57.347441548459,11.9377757111989,8.52151612890289,4.1565760736459,8.12681021373782,3.52108549441701,3.84979432242953,10.1922095882658,0,4.32982082022428,5.06719730950197,3.0331466700887,13.0169622879728,85.967377370861,8.60964406575984,1.73485326766136,0.608930956624282,1.84492397804847,1.95939432718409,2.23418543557839,8.92232798440696,1.48316980640624,19.3763138272682,0,1.94120219936891,7.06692859073259,5.33362778448744,3.72783522436244,16.6885054296582,10.4723353406728,1.02182822083437,0,0,0,18.8736205650077,22.4175295381127,2.63874139437015,13.3844726548053,6.64860189058859,26.1812936145046,16.061885043708,1.73126918545538,6.09594155989456,11.3725241295154,12.8369532090749,1.17108398666433,0,1.62055916824814,1.50704817835715,1.2246569847239,0.512454881139399,0.562210347358373,1.03481348295606,3.01795190105979,2.45837904218165,2.63926686245923,1.09597866213787,1.39023624612799,2.43776516565517,1.23469281844766,0,0,0,0,0.207125772535502,0.938104239924385,0,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0,0.817357396570186,0.493679549740441,0.656669856316381,1.29710095273369,0.146199987425332,2.19550115291051,1.47627060636409,15.5614561937454,2.88132914661996,0.330418782983798,6.34681359992506,0.639864751605702,0.464473343720877,2.19074684247559,2.01683524623343,1.11189021922435,1.90225626112559,0,0.658795818896044,0.251335208800269,0.198956472041151,0.58489226135736,0.898819408654221,1.08069024937347,0.199141273254367,0.758671603812327,0.799739588268102,0,0.610953983535943,0.193952487167626,0.911765658574141,0.69560190836683,1.32849133181642,0.941992367048249,0.616985819609003,36.4636731317193,7.84171996865642,8.05891879964132,10.3436571697033,14.4030686185837,11.8176808278684,10.1850340712568,22.727994858614,3.72911021582581,0.823684239564244,5.75072826109418,2.23284568601102,0.312037673114561,6.31447194867779,41.0820076965179,21.7099584613515,15.3345147838282,0.757965647081939,0.814824882210129,0.509235257325564,0.704070744865506,3.01511263395268,10.4739201989846,5.85400943573396,4.25614889086716,5.09368786192182,4.62418829106713,10.4872521418072,11.2245238212832,11.42727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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20249
|HGNC=
|MCL_coexpression_id=3198
|TSSclassifier=NA
|UniProt=uniprot:P13516,uniprot:Q547C4
|association_with_transcript=-174bp_to_ENSMUST00000041331,NM_009127,uc008hpr.2_5end
|cluster_id=chr19:44482373..44482391,-
|description=CAGE_peak_5_at_Scd1_5end
|id=chr19:44482373..44482391,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.49e-08,25;UBERON:0002330,2.49e-08,25;UBERON:0004111,6.06e-08,122;UBERON:0000025,2.14e-07,114;UBERON:0009854,5.43e-07,23;UBERON:0009856,5.43e-07,23;UBERON:0004121,5.65e-07,95;UBERON:0000924,5.65e-07,95;UBERON:0006601,5.65e-07,95;UBERON:0001016,6.26e-07,75;UBERON:0002107,6.61e-07,22;UBERON:0007499,6.61e-07,22;UBERON:0006925,6.61e-07,22;UBERON:0009497,6.61e-07,22;UBERON:0000015,6.61e-07,22;UBERON:0002423,6.61e-07,22;UBERON:0006235,6.61e-07,22;UBERON:0008835,6.61e-07,22;UBERON:0003894,6.61e-07,22;UBERON:0004161,6.61e-07,22;UBERON:0008836,6.61e-07,22
|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0.0797721589953364,0,0,8.32774404539157,10.9336644390506,4.89693314689703,45.5842828942653,45.1106486562881,41.590185876207,4.42225108785563,0.0992909512008853,0,3.03985603307473,4.12936705920906,0,0,0,0.190023419456374,0,0.221730510655305,1.90509202037889,4.92051830067656,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0,5.03587271902309,3.4468156614635,5.32285581268876,2.34717403304412,12.8634842264463,9.00713349211335,9.91592485278845,11.198913730029,14.3752564364972,57.0460860596304,0.725362142011344,1.34437519656986,6.17422646486273,1.43266719969378,3.09403255366465,1.21389876515759,1.05798195854407,0.633831403506179,4.06613438482959,5.33576877666684,0,0,0,4.19440154725767,5.76327457982332,0.414758449233911,0.675029691658453,0.630974884054146,7.7125765789027,6.40518768759679,1.22490799214954,1.62937300731002,1.83843757322004,18.7196997698961,21.7068474744819,26.7275367865864,1.05509030184155,1.82975287204819,1.56274011167028,17.0301629390842,12.9435400307286,16.3494125121187,5.59794312399969,3.27454865837937,0.745597783301202,3.7863096666592,9.44644501334819,0,14.6272059086836,50.3178786943735,56.6688351219708,61.7287596575286,57.347441548459,11.9377757111989,8.52151612890289,4.1565760736459,8.12681021373782,3.52108549441701,3.84979432242953,10.1922095882658,0,4.32982082022428,5.06719730950197,3.0331466700887,13.0169622879728,85.967377370861,8.60964406575984,1.73485326766136,0.608930956624282,1.84492397804847,1.95939432718409,2.23418543557839,8.92232798440696,1.48316980640624,19.3763138272682,0,1.94120219936891,7.06692859073259,5.33362778448744,3.72783522436244,16.6885054296582,10.4723353406728,1.02182822083437,0,0,0,18.8736205650077,22.4175295381127,2.63874139437015,13.3844726548053,6.64860189058859,26.1812936145046,16.061885043708,1.73126918545538,6.09594155989456,11.3725241295154,12.8369532090749,1.17108398666433,0,1.62055916824814,1.50704817835715,1.2246569847239,0.512454881139399,0.562210347358373,1.03481348295606,3.01795190105979,2.45837904218165,2.63926686245923,1.09597866213787,1.39023624612799,2.43776516565517,1.23469281844766,0,0,0,0,0.207125772535502,0.938104239924385,0,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0,0.817357396570186,0.493679549740441,0.656669856316381,1.29710095273369,0.146199987425332,2.19550115291051,1.47627060636409,15.5614561937454,2.88132914661996,0.330418782983798,6.34681359992506,0.639864751605702,0.464473343720877,2.19074684247559,2.01683524623343,1.11189021922435,1.90225626112559,0,0.658795818896044,0.251335208800269,0.198956472041151,0.58489226135736,0.898819408654221,1.08069024937347,0.199141273254367,0.758671603812327,0.799739588268102,0,0.610953983535943,0.193952487167626,0.911765658574141,0.69560190836683,1.32849133181642,0.941992367048249,0.616985819609003,36.4636731317193,7.84171996865642,8.05891879964132,10.3436571697033,14.4030686185837,11.8176808278684,10.1850340712568,22.727994858614,3.72911021582581,0.823684239564244,5.75072826109418,2.23284568601102,0.312037673114561,6.31447194867779,41.0820076965179,21.7099584613515,15.3345147838282,0.757965647081939,0.814824882210129,0.509235257325564,0.704070744865506,3.01511263395268,10.4739201989846,5.85400943573396,4.25614889086716,5.09368786192182,4.62418829106713,10.4872521418072,11.2245238212832,11.4272756279394,0,1.08781136763742,31.4729134732183,19.3155722413313,35.9633321572654,30.006191767604,4.42624352517024,2.01976741763498,3.47059041357882,1.95219372148319,3.01592756825919,4.54040716109849,2.45078541490634,4.81230102341015,3.64329631507405,3.50707029493574,2.76701444562566,11.2462460747632,4.9679029822894,1.78065603667255,1.30309567482861,1.48473110675282,5.30980553359851,0.485561272309963,0,1.50884063804718,0.590603785761546,0.614870295887855,1.29214146584111,0,0.356497378384721,0.948110273807448,1.05418608574999,3.09406629744561,4.76615448055303,1.08036656418786,0,0.857348140126369,0.177340233642274,1.60531935841864,0.329098041204242,0.608929898229199,1.40803024838226,1.0591603543191,8.38007912608855,11.7069239588451,1.45317984026315,3.31721087104857,2.74556391207214,2.46211349617592,0.291480836629851,41.3498423483437,15.3783792718067,0.82554747185289,3.33350149265481,5.65105371014073,13.8061169998235,9.15112692826091,0.339956859987711,0.139951452323658,0,0,0.949007980743406,1.21991680276109,0.972048067396211,2.09088296014469,2.62035076495413,0.944050424693745,1.1571483801547,2.35580347785627,2.72191443912765,7.45607175704311,0,0.149516546043979,0.496375471371293,1.55560950675238,1.03327858782185,0.844780627453891,0.58678619322877,0.2604087696879,0.104859344425711,1.20792060413003,0.288030006257865,2.52808896502543,0.810900861160657,1.1298205288131,2.07873316764472,1.9692936523423,2.58285761215644,0.480781798079875,0.295379054349154,0.302899349844443,0.381034033274999,0.100826185136841,0.487289403698762,0.192423683280659,0.818138315270983,2.94749498699775,0.887943813496259,0.717710852875806,0.167884616364078,9.46629010757733,2.62755465631655,0.915758121336325,1.2862102744744,2.00628841614145,3.3885110557024,1.84130094602871,4.01026859407578,3.26521046453006,5.48066015816514,6.0431511791176,1.35004500046361,5.85417564191487,4.07828168085784,3.10656187051092,1.14166082342594,1.19707462020309,2.04880326904961,3.8897074730927,3.35381060204772,2.5738091183002,3.33370091702423,1.85431551515005,0.962757628775446,4.04315538822076,2.5347929989024,3.9611531691076,4.12022632867483,3.64943368707755,4.42253110958222,4.76293691283074,3.70829843023538,3.6652751888104,3.70877310722976,4.41596760403192,2.74295401908332,4.08194354166476,2.62279808942053,2.18019624948493,3.19971893412124,3.46919892355874,3.10977553883713,2.63069711437843,2.98769050460896,3.36685362994643,3.91495559809775,3.34915240076916,3.6830793885272,2.94379998253335,3.2794123866794,1.24905288968973,4.44470056046276,2.57845264857958,2.86932498103265,2.64709702943419,2.78241402744506
|short_description=p5@Scd1
}}

Revision as of 04:24, 4 August 2015

Short description:p5@Scd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Scd1_5end
Coexpression cluster:MCL_coexpression_mm9:3198
Association with transcript: -174bp_to_ENSMUST00000041331, NM_009127, uc008hpr.2_5end
EntrezGene:20249
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Scd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.93
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A245.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A445.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A641.59
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.45
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.86
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A257.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D93.79
Mouse Schwann, donor2.CNhs12573.11746-123F99.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C450.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C856.67
Mouse hepatocyte, donor6.CNhs13090.11822-124F461.73
Mouse hepatocyte, donor8.CNhs13091.11824-124F657.35
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.13
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.02
accessory axillary lymph node, adult.CNhs10475.1063-29H985.97
adrenal gland, adult.CNhs10508.49-24D78.61
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I38.92
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H119.38
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B216.69
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A418.87
corpus striatum, adult.CNhs10487.19-21D822.42
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D513.38
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F226.18
diencephalon, neonate N30.CNhs11201.1388-42B216.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.10
epididymis, adult.CNhs10490.58-23B211.37
eyeball, adult.CNhs10484.31-12G412.84
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E815.56
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B236.46
liver, embryo E12.CNhs10601.355-15F87.84
liver, embryo E13.CNhs10524.378-3H68.06
liver, embryo E14.CNhs10594.409-16E110.34
liver, embryo E15.CNhs10520.433-16D714.40
liver, embryo E16.CNhs10523.462-17F511.82
liver, embryo E17.CNhs10510.481-18A310.19
liver, embryo E18.CNhs10579.499-43G422.73
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H141.08
liver, neonate N30.CNhs11106.1382-42D121.71
lung, adult.CNhs10474.28-22B115.33
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I610.47
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E64.62
lung, neonate N20.CNhs11109.822-18A410.49
lung, neonate N25.CNhs11119.1359-25C711.22
lung, neonate N30.CNhs11133.1394-42H211.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B631.47
mammary gland, adult pregnant day19.CNhs10476.588-5H219.32
medulla oblongata, adult.CNhs10477.17-12C235.96
medulla oblongata, neonate N30.CNhs11200.1396-42A330.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I74.97
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F88.38
skin, adult.CNhs10492.30-1C311.71
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H33.32
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C941.35
spleen, adult.CNhs10465.25-2G215.38
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H113.81
spleen, neonate N25.CNhs11099.1354-25G39.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I12.72
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E49.47
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland2.49e-0825
exocrine system2.49e-0825
anatomical conduit6.06e-08122
tube2.14e-07114
digestive tract diverticulum5.43e-0723
sac5.43e-0723
ectoderm-derived structure5.65e-0795
ectoderm5.65e-0795
presumptive ectoderm5.65e-0795
nervous system6.26e-0775
liver6.61e-0722
epithelial sac6.61e-0722
digestive gland6.61e-0722
epithelium of foregut-midgut junction6.61e-0722
anatomical boundary6.61e-0722
hepatobiliary system6.61e-0722
foregut-midgut junction6.61e-0722
hepatic diverticulum6.61e-0722
liver primordium6.61e-0722
septum transversum6.61e-0722
liver bud6.61e-0722
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