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FFCP PHASE1:Mm9::chr19:56622612..56622617,-: Difference between revisions

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{{FFCP|EntrezGene=55947|HGNC=|MCL_coexpression_id=82|UniProt=G5E855,Q9JIC3|association_with_transcript=-96bp_to_ENSMUST00000026063,uc008hza.1_5end|description=CAGE_peak_2_at_Dclre1a_5end|id=chr19:56622612..56622617,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.84e-10!130;UBERON:0000925!2.84e-10!130;UBERON:0006595!2.84e-10!130;UBERON:0001007!4.06e-10!128;UBERON:0001555!4.06e-10!128;UBERON:0007026!4.06e-10!128;UBERON:0000466!1.35e-09!79;UBERON:0004921!1.44e-09!126;UBERON:0004185!1.44e-09!126;UBERON:0005172!2.44e-09!49;UBERON:0005173!2.44e-09!49;UBERON:0002417!2.44e-09!49;UBERON:0000916!2.44e-09!49;UBERON:0005409!3.05e-09!59;UBERON:0009854!1.61e-08!23;UBERON:0009856!1.61e-08!23;UBERON:0002107!6.74e-08!22;UBERON:0007499!6.74e-08!22;UBERON:0006925!6.74e-08!22;UBERON:0009497!6.74e-08!22;UBERON:0000015!6.74e-08!22;UBERON:0002423!6.74e-08!22;UBERON:0006235!6.74e-08!22;UBERON:0008835!6.74e-08!22;UBERON:0003894!6.74e-08!22;UBERON:0004161!6.74e-08!22;UBERON:0008836!6.74e-08!22;UBERON:0009569!1.41e-07!66;UBERON:0002365!1.52e-07!25;UBERON:0002330!1.52e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.07e-09,23;UBERON:0009856,1.07e-09,23;UBERON:0005172,1.18e-09,49;UBERON:0005173,1.18e-09,49;UBERON:0002417,1.18e-09,49;UBERON:0000916,1.18e-09,49;UBERON:0001007,1.59e-09,116;UBERON:0001555,1.59e-09,116;UBERON:0007026,1.59e-09,116;UBERON:0004119,1.75e-09,118;UBERON:0000925,1.75e-09,118;UBERON:0006595,1.75e-09,118;UBERON:0004921,6.97e-09,114;UBERON:0002107,7.11e-09,22;UBERON:0007499,7.11e-09,22;UBERON:0006925,7.11e-09,22;UBERON:0009497,7.11e-09,22;UBERON:0000015,7.11e-09,22;UBERON:0002423,7.11e-09,22;UBERON:0006235,7.11e-09,22;UBERON:0008835,7.11e-09,22;UBERON:0003894,7.11e-09,22;UBERON:0004161,7.11e-09,22;UBERON:0008836,7.11e-09,22;UBERON:0005409,1.03e-08,47;UBERON:0005177,2.24e-08,79;UBERON:0002365,6.07e-08,25;UBERON:0002330,6.07e-08,25;UBERON:0002100,4.13e-07,90;UBERON:0009569,4.56e-07,66|phase1_expression=0.960893082628764,0,2.27499619694768,2.41971369045464,1.00179145989269,1.51091344720701,2.33612640595526,0.645616617207881,0.140788722151667,0.234064526321993,0.171217968225505,0.319088635981346,0.342401459862411,0.34968160967599,1.33243904726265,2.63217847606774,2.09868563438444,0.630924330716475,0.274228867211478,0.42438965179803,0.17008658030214,1.48936426801328,1.30599894569468,1.11994695955385,1.60586496747019,1.14846392823004,1.29228598847722,1.50829862880122,0.570070258369122,0.252030129759931,0.886922042621219,0.635030673459631,0,0,2.3108129580102,1.66234645358492,3.26670970019791,0.418531630736908,0.7813353445238,0,0.588231488031014,1.36609096991689,0.971020706062307,1.00717454380462,0.506884656097573,1.65192076945513,0,0.218025156380447,0,0.194429899074283,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.405017814995072,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.151452386666368,0,0,1.72084775396277,1.3599426674155,0.539703191637817,1.29955283489534,0.896053774194671,0.983110940922263,1.36344258062446,1.29893002301434,1.7666978725517,0.281686839553361,0,2.54805239706646,0,0.649473123033642,0.760079596425296,2.02209778005913,1.94112595522402,0,0,1.38788261412909,1.21786191324856,0.461230994512117,0.753613202763113,1.52865319276416,0.628332956648377,0.988779870937496,0.289198713839823,0.884610551949874,0.323533699894818,0.441683036920787,0.969750506270444,5.59175283654366,0.292780797011547,0.209446706813455,1.53274233125155,0.958520996047362,0,1.52484272487678,0.599162557619291,0,1.13088916901578,0.173824320192276,1.02286182932132,0.20778804455956,0.162241263067758,1.12023300235348,0.622034853050465,0.758168275301024,1.26265113531884,1.04096354370163,0.229902104433473,0.540186389416048,0.90422890701429,0.816437989815934,0.512454881139399,0.937017245597288,0.776110112217047,1.07783996466421,0.189106080167819,0.703804496655795,1.09597866213787,1.39023624612799,0.696504333044333,0.205782136407943,1.19420560091096,0.702213187313235,0.772043721344145,1.13665399758237,0.621377317606506,0.703578179943289,0.540186184383045,0.710234206755631,0.590292695242212,0.925602677324269,1.39520366850245,1.07309360559848,0.700592054203017,0.329119699826961,0.656669856316381,0.648550476366846,0.438599962275997,0.658650345873152,0.402619256281115,0.210289948564127,0.308713837137853,0.660837565967596,0,1.06644125267617,0.464473343720877,0.38660238396628,1.61346819698674,1.11189021922435,0.570676878337677,0.949058123089023,1.81168850196412,1.50801125280162,1.59165177632921,0.779856348476481,1.79763881730844,1.72910439899755,0.995706366271836,0.189667900953082,0.799739588268102,1.1270773567308,1.4255592949172,0.775809948670503,0.561086559122548,1.20149420536089,1.03327103585722,1.255989822731,0.493588655687202,1.77871576252289,1.50160595144485,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:55947
|HGNC=
|MCL_coexpression_id=82
|TSSclassifier=NA
|UniProt=uniprot:G5E855,uniprot:Q9JIC3
|association_with_transcript=-96bp_to_ENSMUST00000026063,uc008hza.1_5end
|cluster_id=chr19:56622612..56622617,-
|description=CAGE_peak_2_at_Dclre1a_5end
|id=chr19:56622612..56622617,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.84e-10!130;UBERON:0000925!2.84e-10!130;UBERON:0006595!2.84e-10!130;UBERON:0001007!4.06e-10!128;UBERON:0001555!4.06e-10!128;UBERON:0007026!4.06e-10!128;UBERON:0000466!1.35e-09!79;UBERON:0004921!1.44e-09!126;UBERON:0004185!1.44e-09!126;UBERON:0005172!2.44e-09!49;UBERON:0005173!2.44e-09!49;UBERON:0002417!2.44e-09!49;UBERON:0000916!2.44e-09!49;UBERON:0005409!3.05e-09!59;UBERON:0009854!1.61e-08!23;UBERON:0009856!1.61e-08!23;UBERON:0002107!6.74e-08!22;UBERON:0007499!6.74e-08!22;UBERON:0006925!6.74e-08!22;UBERON:0009497!6.74e-08!22;UBERON:0000015!6.74e-08!22;UBERON:0002423!6.74e-08!22;UBERON:0006235!6.74e-08!22;UBERON:0008835!6.74e-08!22;UBERON:0003894!6.74e-08!22;UBERON:0004161!6.74e-08!22;UBERON:0008836!6.74e-08!22;UBERON:0009569!1.41e-07!66;UBERON:0002365!1.52e-07!25;UBERON:0002330!1.52e-07!25
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.07e-09,23;UBERON:0009856,1.07e-09,23;UBERON:0005172,1.18e-09,49;UBERON:0005173,1.18e-09,49;UBERON:0002417,1.18e-09,49;UBERON:0000916,1.18e-09,49;UBERON:0001007,1.59e-09,116;UBERON:0001555,1.59e-09,116;UBERON:0007026,1.59e-09,116;UBERON:0004119,1.75e-09,118;UBERON:0000925,1.75e-09,118;UBERON:0006595,1.75e-09,118;UBERON:0004921,6.97e-09,114;UBERON:0002107,7.11e-09,22;UBERON:0007499,7.11e-09,22;UBERON:0006925,7.11e-09,22;UBERON:0009497,7.11e-09,22;UBERON:0000015,7.11e-09,22;UBERON:0002423,7.11e-09,22;UBERON:0006235,7.11e-09,22;UBERON:0008835,7.11e-09,22;UBERON:0003894,7.11e-09,22;UBERON:0004161,7.11e-09,22;UBERON:0008836,7.11e-09,22;UBERON:0005409,1.03e-08,47;UBERON:0005177,2.24e-08,79;UBERON:0002365,6.07e-08,25;UBERON:0002330,6.07e-08,25;UBERON:0002100,4.13e-07,90;UBERON:0009569,4.56e-07,66
|phase1_expression=0.960893082628764,0,2.27499619694768,2.41971369045464,1.00179145989269,1.51091344720701,2.33612640595526,0.645616617207881,0.140788722151667,0.234064526321993,0.171217968225505,0.319088635981346,0.342401459862411,0.34968160967599,1.33243904726265,2.63217847606774,2.09868563438444,0.630924330716475,0.274228867211478,0.42438965179803,0.17008658030214,1.48936426801328,1.30599894569468,1.11994695955385,1.60586496747019,1.14846392823004,1.29228598847722,1.50829862880122,0.570070258369122,0.252030129759931,0.886922042621219,0.635030673459631,0,0,2.3108129580102,1.66234645358492,3.26670970019791,0.418531630736908,0.7813353445238,0,0.588231488031014,1.36609096991689,0.971020706062307,1.00717454380462,0.506884656097573,1.65192076945513,0,0.218025156380447,0,0.194429899074283,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.405017814995072,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.151452386666368,0,0,1.72084775396277,1.3599426674155,0.539703191637817,1.29955283489534,0.896053774194671,0.983110940922263,1.36344258062446,1.29893002301434,1.7666978725517,0.281686839553361,0,2.54805239706646,0,0.649473123033642,0.760079596425296,2.02209778005913,1.94112595522402,0,0,1.38788261412909,1.21786191324856,0.461230994512117,0.753613202763113,1.52865319276416,0.628332956648377,0.988779870937496,0.289198713839823,0.884610551949874,0.323533699894818,0.441683036920787,0.969750506270444,5.59175283654366,0.292780797011547,0.209446706813455,1.53274233125155,0.958520996047362,0,1.52484272487678,0.599162557619291,0,1.13088916901578,0.173824320192276,1.02286182932132,0.20778804455956,0.162241263067758,1.12023300235348,0.622034853050465,0.758168275301024,1.26265113531884,1.04096354370163,0.229902104433473,0.540186389416048,0.90422890701429,0.816437989815934,0.512454881139399,0.937017245597288,0.776110112217047,1.07783996466421,0.189106080167819,0.703804496655795,1.09597866213787,1.39023624612799,0.696504333044333,0.205782136407943,1.19420560091096,0.702213187313235,0.772043721344145,1.13665399758237,0.621377317606506,0.703578179943289,0.540186184383045,0.710234206755631,0.590292695242212,0.925602677324269,1.39520366850245,1.07309360559848,0.700592054203017,0.329119699826961,0.656669856316381,0.648550476366846,0.438599962275997,0.658650345873152,0.402619256281115,0.210289948564127,0.308713837137853,0.660837565967596,0,1.06644125267617,0.464473343720877,0.38660238396628,1.61346819698674,1.11189021922435,0.570676878337677,0.949058123089023,1.81168850196412,1.50801125280162,1.59165177632921,0.779856348476481,1.79763881730844,1.72910439899755,0.995706366271836,0.189667900953082,0.799739588268102,1.1270773567308,1.4255592949172,0.775809948670503,0.561086559122548,1.20149420536089,1.03327103585722,1.255989822731,0.493588655687202,1.77871576252289,1.50160595144485,2.35870794135844,2.24862112384854,2.63718157805054,2.41177159752417,2.29163266603278,0.863088412352432,3.08056930872567,3.0201755450689,14.3768206527355,3.72140947668503,1.87222603868736,2.52578877947112,1.25578189465339,0.964887042726734,0,0.189491411770485,0.814824882210129,0.339490171550376,0.704070744865506,1.00503754465089,0.476087281772027,0.975668239288994,1.26108115284953,1.32878813789265,0.159454768657487,0.327726629431476,0.518054945597687,1.01254341007058,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0.35163505977661,1.3114795630134,0.757412781613119,0.315508219416257,0,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0,0.642642632843614,0.283880170416537,0.890328018336276,1.46598263418218,1.48473110675282,0,1.94224508923985,1.209294227859,0.943025398779491,0.295301892880773,1.22974059177571,1.29214146584111,3.27180356529755,1.42598951353889,1.26414703174326,1.05418608574999,0,0.680879211507576,0.18006109403131,0.129358683782755,1.28602221018955,0.709360934569094,1.07021290561242,0.164549020602121,0.608929898229199,0.704015124191131,1.0591603543191,0,0.49465875882444,1.61464426695906,0.663442174209714,1.19372344003136,0.328281799490123,1.1659233465194,0.370850604021019,2.9048049735635,1.23832120777933,1.11116716421827,6.96963290917357,5.74115756428306,2.74533807847827,0.509935289981566,0.419854356970974,0.138199973804424,0.954670618015114,0.316335993581135,1.62655573701479,1.18805874903981,1.46361807210128,1.09181281873089,0.674321731924103,0.743881101528023,1.57053565190418,1.94422459937689,1.24267862617385,0.56369293868419,0.897099276263873,0.66183396182839,0.972255941720238,0.645799117388655,1.01373675294467,2.58185925020659,1.43224823328345,1.04859344425711,0.966336483304024,0.864090018773596,0,1.62180172232131,1.02710957164827,0.51968329191118,0.179026695667481,0.596044064343795,1.08175904567972,0.443068581523732,0.504832249740738,0.914481679859998,0.705783295957884,0.584747284438515,0.0962118416403295,0.584384510907845,0.680191150845634,0.443971906748129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|short_description=p2@Dclre1a
}}

Revision as of 09:21, 4 August 2015

Short description:p2@Dclre1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dclre1a_5end
Coexpression cluster:MCL_coexpression_mm9:82
Association with transcript: -96bp_to_ENSMUST00000026063, uc008hza.1_5end
EntrezGene:55947
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Dclre1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D16.97
spleen, neonate N20.CNhs11112.824-19H15.74
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum1.07e-0923
sac1.07e-0923
abdomen element1.18e-0949
abdominal segment element1.18e-0949
abdominal segment of trunk1.18e-0949
abdomen1.18e-0949
digestive system1.59e-09116
digestive tract1.59e-09116
primitive gut1.59e-09116
endoderm-derived structure1.75e-09118
endoderm1.75e-09118
presumptive endoderm1.75e-09118
subdivision of digestive tract6.97e-09114
liver7.11e-0922
epithelial sac7.11e-0922
digestive gland7.11e-0922
epithelium of foregut-midgut junction7.11e-0922
anatomical boundary7.11e-0922
hepatobiliary system7.11e-0922
foregut-midgut junction7.11e-0922
hepatic diverticulum7.11e-0922
liver primordium7.11e-0922
septum transversum7.11e-0922
liver bud7.11e-0922
gastrointestinal system1.03e-0847
trunk region element2.24e-0879
exocrine gland6.07e-0825
exocrine system6.07e-0825
trunk4.13e-0790
subdivision of trunk4.56e-0766
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