FFCP PHASE1:Hg19::chr6:139694929..139694963,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C715 | |||
|description=CAGE_peak_at_chr6:139694929..139694963,+ | |||
|id=chr6:139694929..139694963,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.09e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.16e-09;23!CL:0000349;3.42e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.43e-09,23;CL:0002320,4.90e-09,361;CL:0000057,5.97e-09,76;CL:0000134,8.56e-09,354;CL:0000219,1.07e-07,386;CL:0000048,1.35e-07,427;CL:0000723,1.96e-07,433;CL:0000034,3.52e-07,441;CL:0000349,4.84e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.68e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.24e-07;41!UBERON:0004457;9.48e-07;9!UBERON:0000042;9.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.57e-10,371;UBERON:0002199,2.01e-09,46;UBERON:0002416,2.01e-09,46;UBERON:0002097,8.24e-09,41;UBERON:0005631,2.80e-07,14;UBERON:0000158,2.80e-07,14 | |||
|phase1_expression=2.36181893051724,0.856402095563933,1.69145284915165,1.0007329835313,1.34088328328186,0,0,1.26343974685366,1.30592814099919,0.245733936501509,0.697801167972428,0.655324116390517,0.527533956456907,0.866364470720326,2.31978163009541,0,0.602694528023977,0,0.487932798790507,0,1.42800483870977,0.626909442956176,0,0,0.125542639594803,0.0764134057479513,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0.802177789880567,1.73608696572681,0,0.647787332037959,0,0.145398238779565,0,0.242584061187816,1.16214518452842,0,1.23882548358041,1.1507695692886,0.512321413058201,0.236482229888585,3.44745680736619,0,0,0.752969358170419,0,0.449446968890169,6.42776173978895,0.320929027076094,1.91801137739712,0,0.398927315243264,0,0.580418477257168,1.13477044938228,0,0.502497330513487,0,0.434377689410233,3.02699751316684,1.10483290796269,0.949387162322653,0,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,2.10707267820062,0.786839080455332,0.393010762749165,1.23360899399706,0.167186495390678,0,0.473447805734733,1.94826728407911,0,0.589211814949674,0.664601683750863,0.270803863765016,0.768547918354051,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0.267540828089713,1.04535523804977,0.226618685395132,0.383220493601921,0,0.506039384039006,0,0,0.950452044448374,0.150575119077773,0.255973222308837,1.24930726552346,0,0,1.00803371612366,1.06976078313403,1.30341963494519,0,0,0.767175371061182,6.86734389530676,1.00267582127178,5.64901423947212,0,0.486634870302636,0.661743720148475,0.886917589850256,0.527008714158756,0.327447688744282,0,0,0.324547393654683,0.696518949197069,1.59549552622638,0,0.571994910780128,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,1.62028389576352,0.0892997282840798,0,0.337834441449967,0,0,0.366403487860815,0,0,0.436094052142534,4.47274756525787,0.25326102332916,1.72131935057184,0.286836620748814,1.41867352879343,0.560677600142307,0,1.2333377420858,0,0.404132016209064,0,0.756787138224657,0,0.937285727335186,1.5608003841516,0,1.34503812496621,0.469737994575059,0,0.140450806702248,0.408308342509787,0.737005903870608,0.413303124703062,0,0,0,4.31170885089743,0.336672227908132,0.375355559615893,0.554128230968366,1.31693286264251,2.45190236639216,0.901428353439581,0.226864366320042,3.04962380671065,0.427114777637135,3.17897851739343,2.10063767259082,1.33968288009971,4.12224864073007,1.48893485065272,1.85653965465393,1.16924406193438,5.04867548488229,1.93304787148829,0.969876340912871,3.90510551768276,2.01504196455281,3.22165125389926,0,0.272746120590835,0,0.121973706129595,0.397589304964456,0.464775771478074,0.414644220061482,0.504641701751257,0,1.56449532329816,5.78916844373597,0,5.57241513638375,5.0531563716871,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0,0,1.40241773803446,0,2.94017422771084,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0.100528972411631,0.0925884451585296,1.95484983186195,0,0,0.463721619900307,0.234817388471643,0.288732895522148,1.38895653772983,0.951270761172991,3.1608175918371,1.71697232418975,0.246217006087397,0.702012795417713,0.891786973732369,0,0,0,0,0,0,0,0,1.03664057770386,1.29707958075265,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0,0.336393253036082,0.87192013766656,0.66004457238855,0.646358578788889,0,0,3.72313363218819,11.4408180602503,2.05765899409714,1.41849132023278,0,2.14466990487221,0.542621605391443,2.46972101034231,0,0,0.791951872933429,0.301439377059586,0,0.299918973546171,1.2162378064119,2.00902836572851,2.10833939483032,1.19812427745791,2.29723871668228,0,1.15825045334063,2.05476322550383,0.537182889719687,0.336255431980582,0.788123040807709,1.50939302401662,1.15508732651774,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.858840442033979,3.50119364741774,0.813795071099207,6.86303843051664,6.60187258549499,11.1968714674094,6.67706065458465,0.601892199455438,0,1.03473071292505,0,1.10621501125022,1.21637060255316,0.783204629850962,0,0.206768026122887,0.431428401637234,0.426910231213777,2.12189300012382,0,2.41912234663744,1.73675465473144,3.22270143904931,2.80660094433074,1.28139149255701,2.04682899626681,1.76939313257968,1.48418066444991,0.154209693802656,1.06537035187876,0.574890092096664,0,0.697262270759755,0.241718899183244,0.200506470303285,0.184161977871793,0.229628896329213,0.364182336013434,0.786746489756545,0,0.693138033939733,0.784349769176855,1.46139224653261,0.422206515571503,2.27466768141793,0,0.431831832204279,0,1.08378575017541,2.50844886927427,0,0,0.671624264166535,0.438519753291869,0.522870902049801,0.256450125116389,0,0,0.721287081534056,0.0915694648183434,0.082509499920588,0,0,0,0.386682873168488,0.308097234229289,0.767518373630648,0.413509717453592,0.322260734604821,1.0151168573996,0.511359764496605,0.356128142586949,0.165284915360978,0.192190067365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| |||
|short_description=p@chr6:139694929..139694963,+ | |||
}} |
Revision as of 14:17, 22 January 2014
Short description: | p@chr6:139694929..139694963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:139694929..139694963, + |
Coexpression cluster: | C715_liposarcoma_Fibroblast_Mesenchymal_Olfactory_Hair_Mast_peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.43e-09 | 23 |
connective tissue cell | 4.90e-09 | 361 |
fibroblast | 5.97e-09 | 76 |
mesenchymal cell | 8.56e-09 | 354 |
motile cell | 1.07e-07 | 386 |
multi fate stem cell | 1.35e-07 | 427 |
somatic stem cell | 1.96e-07 | 433 |
stem cell | 3.52e-07 | 441 |
extraembryonic cell | 4.84e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.57e-10 | 371 |
integument | 2.01e-09 | 46 |
integumental system | 2.01e-09 | 46 |
skin of body | 8.24e-09 | 41 |
extraembryonic membrane | 2.80e-07 | 14 |
membranous layer | 2.80e-07 | 14 |