FFCP PHASE1:Mm9::chr1:187255827..187255839,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=125|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:187255827..187255839,+|id=chr1:187255827..187255839,+|ontology_enrichment_celltype=CL:0000473!1.50e-08!3;CL:0000627!1.50e-08!3;CL:0000682!1.50e-08!3;CL:0000239!4.59e-08!6;CL:0000677!4.59e-08!6;CL:0000212!4.59e-08!6;CL:0000584!4.59e-08!6;CL:0002563!8.79e-08!9;CL:0002251!8.79e-08!9;CL:0000075!6.61e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,8.99e-13,6;CL:0000677,8.99e-13,6;CL:0000584,8.99e-13,6;CL:0000075,5.64e-11,7;CL:0002563,1.43e-08,9;CL:0002251,1.43e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.68e-30!43;UBERON:0005409!5.23e-23!59;UBERON:0000344!9.01e-21!15;UBERON:0001242!2.18e-16!13;UBERON:0000060!2.18e-16!13;UBERON:0001262!2.18e-16!13;UBERON:0004786!2.18e-16!13;UBERON:0004923!3.82e-12!24;UBERON:0001007!1.13e-10!128;UBERON:0001555!1.13e-10!128;UBERON:0007026!1.13e-10!128;UBERON:0004119!2.01e-10!130;UBERON:0000925!2.01e-10!130;UBERON:0006595!2.01e-10!130;UBERON:0004921!6.93e-09!126;UBERON:0004185!6.93e-09!126;UBERON:0000331!7.62e-09!3;UBERON:0002116!7.62e-09!3;UBERON:0001204!7.62e-09!3;UBERON:0001168!7.62e-09!3;UBERON:0003350!8.79e-08!9;UBERON:0004808!8.79e-08!9;UBERON:0001277!8.79e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.13e-41,31;UBERON:0005409,3.85e-30,47;UBERON:0001242,4.16e-17,13;UBERON:0001262,4.16e-17,13;UBERON:0004786,4.16e-17,13;UBERON:0000344,9.80e-15,15;UBERON:0002108,4.05e-11,4;UBERON:0004921,6.11e-11,114;UBERON:0001007,1.05e-10,116;UBERON:0001555,1.05e-10,116;UBERON:0007026,1.05e-10,116;UBERON:0004119,1.77e-10,118;UBERON:0000925,1.77e-10,118;UBERON:0006595,1.77e-10,118;UBERON:0001155,8.81e-10,2;UBERON:0000059,8.81e-10,2;UBERON:0004923,6.15e-09,24;UBERON:0003350,1.43e-08,9;UBERON:0004808,1.43e-08,9;UBERON:0001277,1.43e-08,9;UBERON:0000331,4.80e-07,3;UBERON:0002116,4.80e-07,3;UBERON:0001204,4.80e-07,3;UBERON:0001168,4.80e-07,3;UBERON:0000485,4.93e-07,11|phase1_expression=0,1.39590163055744,2.72999543633722,4.23449895829562,6.01074875935617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,1.14846392823004,0.430761996159075,0.861884930743556,2.66032787238923,2.01624103807945,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,1.86391761218122,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,13.8775888853195,3.70230793328962,0,0,0,0,0.22237804384487,0.190225626112559,8.0669940462567,0.658795818896044,1.50801125280162,0.795825888164603,1.9496408711912,6.29173586057955,5.61958929674205,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.7729411862916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:187255827..187255839,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=125 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:187255827..187255839,+ | |||
|description=CAGE_peak_at_chr1:187255827..187255839,+ | |||
|id=chr1:187255827..187255839,+ | |||
|ontology_enrichment_celltype=CL:0000473!1.50e-08!3;CL:0000627!1.50e-08!3;CL:0000682!1.50e-08!3;CL:0000239!4.59e-08!6;CL:0000677!4.59e-08!6;CL:0000212!4.59e-08!6;CL:0000584!4.59e-08!6;CL:0002563!8.79e-08!9;CL:0002251!8.79e-08!9;CL:0000075!6.61e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.99e-13,6;CL:0000677,8.99e-13,6;CL:0000584,8.99e-13,6;CL:0000075,5.64e-11,7;CL:0002563,1.43e-08,9;CL:0002251,1.43e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.68e-30!43;UBERON:0005409!5.23e-23!59;UBERON:0000344!9.01e-21!15;UBERON:0001242!2.18e-16!13;UBERON:0000060!2.18e-16!13;UBERON:0001262!2.18e-16!13;UBERON:0004786!2.18e-16!13;UBERON:0004923!3.82e-12!24;UBERON:0001007!1.13e-10!128;UBERON:0001555!1.13e-10!128;UBERON:0007026!1.13e-10!128;UBERON:0004119!2.01e-10!130;UBERON:0000925!2.01e-10!130;UBERON:0006595!2.01e-10!130;UBERON:0004921!6.93e-09!126;UBERON:0004185!6.93e-09!126;UBERON:0000331!7.62e-09!3;UBERON:0002116!7.62e-09!3;UBERON:0001204!7.62e-09!3;UBERON:0001168!7.62e-09!3;UBERON:0003350!8.79e-08!9;UBERON:0004808!8.79e-08!9;UBERON:0001277!8.79e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.13e-41,31;UBERON:0005409,3.85e-30,47;UBERON:0001242,4.16e-17,13;UBERON:0001262,4.16e-17,13;UBERON:0004786,4.16e-17,13;UBERON:0000344,9.80e-15,15;UBERON:0002108,4.05e-11,4;UBERON:0004921,6.11e-11,114;UBERON:0001007,1.05e-10,116;UBERON:0001555,1.05e-10,116;UBERON:0007026,1.05e-10,116;UBERON:0004119,1.77e-10,118;UBERON:0000925,1.77e-10,118;UBERON:0006595,1.77e-10,118;UBERON:0001155,8.81e-10,2;UBERON:0000059,8.81e-10,2;UBERON:0004923,6.15e-09,24;UBERON:0003350,1.43e-08,9;UBERON:0004808,1.43e-08,9;UBERON:0001277,1.43e-08,9;UBERON:0000331,4.80e-07,3;UBERON:0002116,4.80e-07,3;UBERON:0001204,4.80e-07,3;UBERON:0001168,4.80e-07,3;UBERON:0000485,4.93e-07,11 | |||
|phase1_expression=0,1.39590163055744,2.72999543633722,4.23449895829562,6.01074875935617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,1.14846392823004,0.430761996159075,0.861884930743556,2.66032787238923,2.01624103807945,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,1.86391761218122,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,13.8775888853195,3.70230793328962,0,0,0,0,0.22237804384487,0.190225626112559,8.0669940462567,0.658795818896044,1.50801125280162,0.795825888164603,1.9496408711912,6.29173586057955,5.61958929674205,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.7729411862916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:187255827..187255839,+ | |||
}} |
Latest revision as of 11:01, 5 August 2015
Short description: | p@chr1:187255827..187255839, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:187255827..187255839, + |
Coexpression cluster: | MCL_coexpression_mm9:125 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.99e-13 | 6 |
gut absorptive cell | 8.99e-13 | 6 |
enterocyte | 8.99e-13 | 6 |
columnar/cuboidal epithelial cell | 5.64e-11 | 7 |
intestinal epithelial cell | 1.43e-08 | 9 |
epithelial cell of alimentary canal | 1.43e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.13e-41 | 31 |
gastrointestinal system | 3.85e-30 | 47 |
intestinal mucosa | 4.16e-17 | 13 |
wall of intestine | 4.16e-17 | 13 |
gastrointestinal system mucosa | 4.16e-17 | 13 |
mucosa | 9.80e-15 | 15 |
small intestine | 4.05e-11 | 4 |
subdivision of digestive tract | 6.11e-11 | 114 |
digestive system | 1.05e-10 | 116 |
digestive tract | 1.05e-10 | 116 |
primitive gut | 1.05e-10 | 116 |
endoderm-derived structure | 1.77e-10 | 118 |
endoderm | 1.77e-10 | 118 |
presumptive endoderm | 1.77e-10 | 118 |
colon | 8.81e-10 | 2 |
large intestine | 8.81e-10 | 2 |
organ component layer | 6.15e-09 | 24 |
epithelium of mucosa | 1.43e-08 | 9 |
gastrointestinal system epithelium | 1.43e-08 | 9 |
intestinal epithelium | 1.43e-08 | 9 |
ileal mucosa | 4.80e-07 | 3 |
ileum | 4.80e-07 | 3 |
mucosa of small intestine | 4.80e-07 | 3 |
wall of small intestine | 4.80e-07 | 3 |
simple columnar epithelium | 4.93e-07 | 11 |