FFCP PHASE1:Mm9::chr1:64168424..64168440,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:64168424..64168440,+|id=chr1:64168424..64168440,+|ontology_enrichment_celltype=CL:0000144!1.01e-30!121;CL:0000012!1.01e-30!121;CL:0002371!1.30e-28!118;CL:0000548!1.91e-26!115;CL:0000004!1.91e-26!115;CL:0000255!1.91e-26!115;CL:0000723!2.88e-21!91;CL:0000048!2.88e-21!91;CL:0000034!5.15e-21!97;CL:0002321!4.26e-16!70;CL:0000220!4.26e-16!70;CL:0000063!1.51e-15!66;CL:0000221!5.73e-13!44;CL:0000133!5.73e-13!44;CL:0002319!2.10e-12!43;CL:0000055!2.55e-12!50;CL:0000219!5.20e-11!54;CL:0000540!3.45e-09!33;CL:0000047!3.45e-09!33;CL:0000031!3.45e-09!33;CL:0000404!3.45e-09!33;CL:0000393!9.84e-09!39;CL:0000211!9.84e-09!39;CL:0002320!1.09e-08!46;CL:0000134!1.09e-08!46;CL:0000988!1.22e-07!32;CL:0002032!1.22e-07!32;CL:0000037!1.22e-07!32;CL:0000566!1.22e-07!32;CL:0000837!1.22e-07!32;CL:0002563!6.85e-07!9;CL:0002251!6.85e-07!9|ontology_enrichment_celltype_v019_2=CL:0000034,6.61e-24,97;CL:0000723,8.08e-24,91;CL:0000048,8.08e-24,91;CL:0002321,2.33e-18,70;CL:0000221,1.12e-13,44;CL:0000133,1.12e-13,44;CL:0000219,4.15e-13,54;CL:0002319,4.66e-13,43;CL:0002320,1.88e-10,46;CL:0000134,1.88e-10,46;CL:0000540,1.68e-09,33;CL:0000047,1.68e-09,33;CL:0000031,1.68e-09,33;CL:0000404,1.68e-09,33;CL:0000393,8.06e-09,39;CL:0000211,8.06e-09,39;CL:0000988,1.06e-08,32;CL:0002032,1.06e-08,32;CL:0000037,1.06e-08,32;CL:0000837,1.06e-08,32;CL:0000066,1.46e-08,25;CL:0002563,1.61e-07,9;CL:0002251,1.61e-07,9;CL:0000738,5.59e-07,17;CL:0002087,5.59e-07,17;CL:0002031,9.04e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.09e-08!46;UBERON:0000485!5.39e-08!11;UBERON:0000073!1.46e-07!75;UBERON:0001016!1.46e-07!75;UBERON:0001017!1.92e-07!73;UBERON:0005743!1.92e-07!73;UBERON:0003350!6.85e-07!9;UBERON:0004808!6.85e-07!9;UBERON:0001277!6.85e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.88e-10,46;UBERON:0000485,9.42e-09,11;UBERON:0003350,1.61e-07,9;UBERON:0004808,1.61e-07,9;UBERON:0001277,1.61e-07,9;UBERON:0001016,2.20e-07,75;UBERON:0001017,2.98e-07,73|phase1_expression=8.80818659076367,12.9120900826564,10.9199817453489,39.0178832585811,42.5761370454395,11.4157904900085,10.7461814673942,20.5306084272106,6.89864738543167,5.61754863172784,3.93801326918661,2.47293692885543,12.3264525550468,15.2985704233245,1.66554880907831,0.607425802169478,0,2.83915948822414,2.19383093769182,2.12194825899015,1.44573593256819,1.68794617041505,1.04479915655574,0.95995453676044,1.37645568640302,10.9104073181854,9.90752591165872,7.54149314400612,0.950117097281869,0.756090389279792,1.55211357458713,2.54012269383853,2.46025915033828,0,16.4645423258227,5.48574329683025,23.8878146826972,37.2493151355848,37.5040965371424,9.42342739152837,136.469705223195,61.4740936462601,22.8189865924642,1.25896817975577,2.93993100536592,2.75320128242522,8.60630478782843,5.45062890951116,3.51497892375155,3.69416808241138,2.93971485413261,7.18762821824858,7.71799987865587,17.4086914082723,14.1159395639835,0.514518872071894,0.85960031981627,1.54701627683233,4.04632921719196,6.34789175126439,8.23980824558033,3.72728985276045,2.66788438833342,6.29929802096979,1.97773272513395,3.5524005747305,3.59520132622086,7.68436610643109,2.7996195323289,3.78016627328734,2.52389953621658,3.99911378165325,5.07997644188711,4.16468717330844,5.46319184803947,7.35375029288017,3.30347642998166,1.91531007127782,1.0752457327937,2.76961204233407,4.66586982372289,4.16730696445408,0.837548997004143,4.50210088025344,1.68078072554491,0.883885756421003,1.13897344639282,2.42319279572891,1.81742863999642,1.20914496170857,41.1607573956382,4.30211938490693,3.39985666853875,0,1.29955283489534,0,1.12355536105401,1.53387290320252,1.03914401841148,1.7666978725517,11.1266301623578,0,2.54805239706646,0,4.32982082022428,2.02687892380079,3.0331466700887,0.68510327831436,0,0.148442139064825,0.867426633830679,0,1.61430848079241,0.753613202763113,0.470354828542819,0.502666365318702,0.741584903203122,0.433798070759735,0.884610551949874,0.808834249737046,0.441683036920787,1.45462575940567,0,0.878342391034642,1.8850203613211,0.510914110417183,4.43315960671905,10.7982491578813,3.30382590389968,0.599162557619291,0,3.8952849154988,1.04294592115366,0.511430914660661,0.83115217823824,0.973447578406546,1.01839363850316,0.373220911830279,2.0217820674694,0,1.56144531555244,3.90833577536904,3.06105620669094,1.80845781402858,1.36072998302656,1.0249097622788,1.40552586839593,0,1.29340795759705,0.756424320671277,0.703804496655795,0.43839146485515,0.834141747676794,1.0447564995665,0.61734640922383,1.99034266818493,4.21327912387941,4.37491442095016,3.9782889915383,0.207125772535502,0.703578179943289,0.720248245844059,0.473489471170421,0.787056926989615,0.925602677324269,1.16266972375204,1.3413670069981,0.934122738937356,1.31647879930784,0.492502392237286,1.05389452409612,1.90059983652932,1.3173006917463,0.939444931322602,0.210289948564127,1.23485534855141,0,1.32225283331772,0.853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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:64168424..64168440,+ | |||
|description=CAGE_peak_at_chr1:64168424..64168440,+ | |||
|id=chr1:64168424..64168440,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.01e-30!121;CL:0000012!1.01e-30!121;CL:0002371!1.30e-28!118;CL:0000548!1.91e-26!115;CL:0000004!1.91e-26!115;CL:0000255!1.91e-26!115;CL:0000723!2.88e-21!91;CL:0000048!2.88e-21!91;CL:0000034!5.15e-21!97;CL:0002321!4.26e-16!70;CL:0000220!4.26e-16!70;CL:0000063!1.51e-15!66;CL:0000221!5.73e-13!44;CL:0000133!5.73e-13!44;CL:0002319!2.10e-12!43;CL:0000055!2.55e-12!50;CL:0000219!5.20e-11!54;CL:0000540!3.45e-09!33;CL:0000047!3.45e-09!33;CL:0000031!3.45e-09!33;CL:0000404!3.45e-09!33;CL:0000393!9.84e-09!39;CL:0000211!9.84e-09!39;CL:0002320!1.09e-08!46;CL:0000134!1.09e-08!46;CL:0000988!1.22e-07!32;CL:0002032!1.22e-07!32;CL:0000037!1.22e-07!32;CL:0000566!1.22e-07!32;CL:0000837!1.22e-07!32;CL:0002563!6.85e-07!9;CL:0002251!6.85e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,6.61e-24,97;CL:0000723,8.08e-24,91;CL:0000048,8.08e-24,91;CL:0002321,2.33e-18,70;CL:0000221,1.12e-13,44;CL:0000133,1.12e-13,44;CL:0000219,4.15e-13,54;CL:0002319,4.66e-13,43;CL:0002320,1.88e-10,46;CL:0000134,1.88e-10,46;CL:0000540,1.68e-09,33;CL:0000047,1.68e-09,33;CL:0000031,1.68e-09,33;CL:0000404,1.68e-09,33;CL:0000393,8.06e-09,39;CL:0000211,8.06e-09,39;CL:0000988,1.06e-08,32;CL:0002032,1.06e-08,32;CL:0000037,1.06e-08,32;CL:0000837,1.06e-08,32;CL:0000066,1.46e-08,25;CL:0002563,1.61e-07,9;CL:0002251,1.61e-07,9;CL:0000738,5.59e-07,17;CL:0002087,5.59e-07,17;CL:0002031,9.04e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.09e-08!46;UBERON:0000485!5.39e-08!11;UBERON:0000073!1.46e-07!75;UBERON:0001016!1.46e-07!75;UBERON:0001017!1.92e-07!73;UBERON:0005743!1.92e-07!73;UBERON:0003350!6.85e-07!9;UBERON:0004808!6.85e-07!9;UBERON:0001277!6.85e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.88e-10,46;UBERON:0000485,9.42e-09,11;UBERON:0003350,1.61e-07,9;UBERON:0004808,1.61e-07,9;UBERON:0001277,1.61e-07,9;UBERON:0001016,2.20e-07,75;UBERON:0001017,2.98e-07,73 | |||
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| |||
|short_description=p@chr1:64168424..64168440,+ | |||
}} |
Latest revision as of 20:55, 5 August 2015
Short description: | p@chr1:64168424..64168440, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:64168424..64168440, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 6.61e-24 | 97 |
somatic stem cell | 8.08e-24 | 91 |
multi fate stem cell | 8.08e-24 | 91 |
embryonic cell | 2.33e-18 | 70 |
ectodermal cell | 1.12e-13 | 44 |
neurectodermal cell | 1.12e-13 | 44 |
motile cell | 4.15e-13 | 54 |
neural cell | 4.66e-13 | 43 |
connective tissue cell | 1.88e-10 | 46 |
mesenchymal cell | 1.88e-10 | 46 |
neuron | 1.68e-09 | 33 |
neuronal stem cell | 1.68e-09 | 33 |
neuroblast | 1.68e-09 | 33 |
electrically signaling cell | 1.68e-09 | 33 |
electrically responsive cell | 8.06e-09 | 39 |
electrically active cell | 8.06e-09 | 39 |
hematopoietic cell | 1.06e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.06e-08 | 32 |
hematopoietic stem cell | 1.06e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.06e-08 | 32 |
epithelial cell | 1.46e-08 | 25 |
intestinal epithelial cell | 1.61e-07 | 9 |
epithelial cell of alimentary canal | 1.61e-07 | 9 |
leukocyte | 5.59e-07 | 17 |
nongranular leukocyte | 5.59e-07 | 17 |
hematopoietic lineage restricted progenitor cell | 9.04e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.88e-10 | 46 |
simple columnar epithelium | 9.42e-09 | 11 |
epithelium of mucosa | 1.61e-07 | 9 |
gastrointestinal system epithelium | 1.61e-07 | 9 |
intestinal epithelium | 1.61e-07 | 9 |
nervous system | 2.20e-07 | 75 |
central nervous system | 2.98e-07 | 73 |