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FFCP PHASE1:Mm9::chr1:87791106..87791230,+: Difference between revisions

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{{FFCP|EntrezGene=64294|HGNC=|MCL_coexpression_id=1759|UniProt=Q91VK4|association_with_transcript=21bp_to_NM_022417,uc011wof.1_5end|description=CAGE_peak_1_at_Itm2c_5end|id=chr1:87791106..87791230,+|ontology_enrichment_celltype=CL:0000055!1.06e-07!50|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.13e-19!73;UBERON:0005743!4.13e-19!73;UBERON:0000073!4.29e-18!75;UBERON:0001016!4.29e-18!75;UBERON:0004121!2.55e-16!102;UBERON:0000924!2.55e-16!102;UBERON:0006601!2.55e-16!102;UBERON:0002346!3.94e-15!71;UBERON:0003075!3.94e-15!71;UBERON:0007284!3.94e-15!71;UBERON:0000955!2.16e-14!50;UBERON:0006238!2.16e-14!50;UBERON:0001049!3.93e-14!52;UBERON:0005068!3.93e-14!52;UBERON:0006241!3.93e-14!52;UBERON:0007135!3.93e-14!52;UBERON:0002616!7.29e-14!49;UBERON:0000033!1.54e-12!63;UBERON:0003080!8.13e-10!40;UBERON:0004111!8.54e-10!122;UBERON:0002780!2.33e-09!39;UBERON:0001890!2.33e-09!39;UBERON:0006240!2.33e-09!39;UBERON:0000025!4.97e-09!114;UBERON:0003056!3.18e-08!49;UBERON:0002020!3.95e-07!34;UBERON:0002021!4.10e-07!10;UBERON:0000411!4.10e-07!10;UBERON:0001950!4.10e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.13e-19,73;UBERON:0001016,4.29e-18,75;UBERON:0010314,1.85e-15,92;UBERON:0000073,3.27e-15,54;UBERON:0001049,3.93e-14,52;UBERON:0005068,3.93e-14,52;UBERON:0006241,3.93e-14,52;UBERON:0007135,3.93e-14,52;UBERON:0004121,2.10e-13,95;UBERON:0000924,2.10e-13,95;UBERON:0006601,2.10e-13,95;UBERON:0000955,6.84e-13,47;UBERON:0006238,6.84e-13,47;UBERON:0002616,2.23e-12,46;UBERON:0002346,3.10e-12,64;UBERON:0003075,3.10e-12,64;UBERON:0007284,3.10e-12,64;UBERON:0003080,8.13e-10,40;UBERON:0004111,8.54e-10,122;UBERON:0010371,8.97e-10,73;UBERON:0002780,2.33e-09,39;UBERON:0001890,2.33e-09,39;UBERON:0006240,2.33e-09,39;UBERON:0000025,4.97e-09,114;UBERON:0003056,3.18e-08,49;UBERON:0002020,3.95e-07,34;UBERON:0002021,4.10e-07,10;UBERON:0000411,4.10e-07,10;UBERON:0001950,4.10e-07,10|phase1_expression=182.569685699465,42.2260243243627,56.4199056843025,27.2217790176147,28.0501608769954,71.1808112906413,70.0837921786577,175.091226586777,47.0234331986567,45.1744535801447,17.1217968225505,18.028507932946,88.8531788342958,100.183781172171,27.3150004688843,34.6232707236602,25.8837894907414,28.7070570475996,28.5198021899937,28.8584963222661,168.470757789269,15.9858431433425,9.14199261986274,59.8371661247341,78.9167926871065,51.6808767703518,55.9990595006797,42.4478328391201,50.1661827364827,46.1215137460673,72.5058769842846,9.52546010189447,4.92051830067656,0,42.7500397231886,48.3742817993213,42.8755648150975,13.393012183581,31.253413780952,19.3703785270305,12.3528612486513,12.9778642142105,16.0218416500281,361.827454861809,365.46383704635,316.985240983224,1000.67852942114,161.12059056515,576.895915860723,389.637517744864,241.056618038874,431.257693094915,11.7447824240415,89.2195434673954,48.0614132773724,259.57477096027,166.762462044356,258.867390323276,101.765179812378,118.493979356935,105.216012982026,433.721001048489,343.2677912989,548.038927824372,604.197347528421,623.09106080773,965.910756311337,2246.90864952045,44.8976021295708,53.4623515793495,38.2791429659515,199.670038098259,204.303400380243,36.3797673668413,31.4373144939815,33.0918763179608,361.180089677995,351.650929086607,347.15076515911,102.607531854091,105.210790142771,97.9317136646709,396.998224579964,634.796224115735,493.38554207132,140.537835270939,128.419256080791,83.8797506213853,35.5155846732633,72.4731261424073,172.469370777498,120.459342777394,65.2772480359441,37.7792234146472,42.2354671340985,25.0895056774508,68.2559881840314,80.1022516116871,96.3806077076643,83.03480000993,183.237289129461,138.592595607463,76.4415719119937,42.6640021891999,138.121284165155,137.321047087503,110.709853458238,63.7146048832355,54.6358934495532,390.551267879554,105.479078673811,209.472249078753,260.36489640209,312.146588584481,262.575583034029,323.591472673914,185.39622580078,34.9930443746186,54.8458542208922,65.0302736788585,47.701767987445,58.6699056293619,42.8701050801681,205.532119502106,256.153322432856,42.6613282198348,96.6908054762777,82.7865768770903,120.335505038192,347.364492779784,485.408139590563,72.5025611691228,413.180409097041,467.703571457175,430.121252238289,407.063329037004,151.740652136971,133.1154585528,249.690085332471,37.8795340595653,70.7855209717108,99.3177091152603,70.5843548836969,77.4622763675575,59.1237177625039,60.5977896947339,78.428343456493,108.138008968909,70.7063016819722,63.3505368562195,83.7527351020397,100.830036916684,99.2628679735384,72.4364506366106,86.6342794277442,120.415731425188,91.9899275380338,84.1527656265119,118.780342747358,108.326779036067,97.562840952136,131.085180743619,101.090002094885,81.2636277116778,84.0755765236212,68.8300476461207,62.5077025261113,67.3736025458568,55.9503489705834,78.6362152938866,63.476877874405,66.6671942659515,69.377836431972,77.3028972059741,456.53947833272,74.4000347502226,35.3548097792664,30.4118151663076,60.5738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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:64294
|HGNC=
|MCL_coexpression_id=1759
|TSSclassifier=NA
|UniProt=uniprot:Q91VK4
|association_with_transcript=21bp_to_NM_022417,uc011wof.1_5end
|cluster_id=chr1:87791106..87791230,+
|description=CAGE_peak_1_at_Itm2c_5end
|id=chr1:87791106..87791230,+
|ontology_enrichment_celltype=CL:0000055!1.06e-07!50
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.13e-19!73;UBERON:0005743!4.13e-19!73;UBERON:0000073!4.29e-18!75;UBERON:0001016!4.29e-18!75;UBERON:0004121!2.55e-16!102;UBERON:0000924!2.55e-16!102;UBERON:0006601!2.55e-16!102;UBERON:0002346!3.94e-15!71;UBERON:0003075!3.94e-15!71;UBERON:0007284!3.94e-15!71;UBERON:0000955!2.16e-14!50;UBERON:0006238!2.16e-14!50;UBERON:0001049!3.93e-14!52;UBERON:0005068!3.93e-14!52;UBERON:0006241!3.93e-14!52;UBERON:0007135!3.93e-14!52;UBERON:0002616!7.29e-14!49;UBERON:0000033!1.54e-12!63;UBERON:0003080!8.13e-10!40;UBERON:0004111!8.54e-10!122;UBERON:0002780!2.33e-09!39;UBERON:0001890!2.33e-09!39;UBERON:0006240!2.33e-09!39;UBERON:0000025!4.97e-09!114;UBERON:0003056!3.18e-08!49;UBERON:0002020!3.95e-07!34;UBERON:0002021!4.10e-07!10;UBERON:0000411!4.10e-07!10;UBERON:0001950!4.10e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.13e-19,73;UBERON:0001016,4.29e-18,75;UBERON:0010314,1.85e-15,92;UBERON:0000073,3.27e-15,54;UBERON:0001049,3.93e-14,52;UBERON:0005068,3.93e-14,52;UBERON:0006241,3.93e-14,52;UBERON:0007135,3.93e-14,52;UBERON:0004121,2.10e-13,95;UBERON:0000924,2.10e-13,95;UBERON:0006601,2.10e-13,95;UBERON:0000955,6.84e-13,47;UBERON:0006238,6.84e-13,47;UBERON:0002616,2.23e-12,46;UBERON:0002346,3.10e-12,64;UBERON:0003075,3.10e-12,64;UBERON:0007284,3.10e-12,64;UBERON:0003080,8.13e-10,40;UBERON:0004111,8.54e-10,122;UBERON:0010371,8.97e-10,73;UBERON:0002780,2.33e-09,39;UBERON:0001890,2.33e-09,39;UBERON:0006240,2.33e-09,39;UBERON:0000025,4.97e-09,114;UBERON:0003056,3.18e-08,49;UBERON:0002020,3.95e-07,34;UBERON:0002021,4.10e-07,10;UBERON:0000411,4.10e-07,10;UBERON:0001950,4.10e-07,10
|phase1_expression=182.569685699465,42.2260243243627,56.4199056843025,27.2217790176147,28.0501608769954,71.1808112906413,70.0837921786577,175.091226586777,47.0234331986567,45.1744535801447,17.1217968225505,18.028507932946,88.8531788342958,100.183781172171,27.3150004688843,34.6232707236602,25.8837894907414,28.7070570475996,28.5198021899937,28.8584963222661,168.470757789269,15.9858431433425,9.14199261986274,59.8371661247341,78.9167926871065,51.6808767703518,55.9990595006797,42.4478328391201,50.1661827364827,46.1215137460673,72.5058769842846,9.52546010189447,4.92051830067656,0,42.7500397231886,48.3742817993213,42.8755648150975,13.393012183581,31.253413780952,19.3703785270305,12.3528612486513,12.9778642142105,16.0218416500281,361.827454861809,365.46383704635,316.985240983224,1000.67852942114,161.12059056515,576.895915860723,389.637517744864,241.056618038874,431.257693094915,11.7447824240415,89.2195434673954,48.0614132773724,259.57477096027,166.762462044356,258.867390323276,101.765179812378,118.493979356935,105.216012982026,433.721001048489,343.2677912989,548.038927824372,604.197347528421,623.09106080773,965.910756311337,2246.90864952045,44.8976021295708,53.4623515793495,38.2791429659515,199.670038098259,204.303400380243,36.3797673668413,31.4373144939815,33.0918763179608,361.180089677995,351.650929086607,347.15076515911,102.607531854091,105.210790142771,97.9317136646709,396.998224579964,634.796224115735,493.38554207132,140.537835270939,128.419256080791,83.8797506213853,35.5155846732633,72.4731261424073,172.469370777498,120.459342777394,65.2772480359441,37.7792234146472,42.2354671340985,25.0895056774508,68.2559881840314,80.1022516116871,96.3806077076643,83.03480000993,183.237289129461,138.592595607463,76.4415719119937,42.6640021891999,138.121284165155,137.321047087503,110.709853458238,63.7146048832355,54.6358934495532,390.551267879554,105.479078673811,209.472249078753,260.36489640209,312.146588584481,262.575583034029,323.591472673914,185.39622580078,34.9930443746186,54.8458542208922,65.0302736788585,47.701767987445,58.6699056293619,42.8701050801681,205.532119502106,256.153322432856,42.6613282198348,96.6908054762777,82.7865768770903,120.335505038192,347.364492779784,485.408139590563,72.5025611691228,413.180409097041,467.703571457175,430.121252238289,407.063329037004,151.740652136971,133.1154585528,249.690085332471,37.8795340595653,70.7855209717108,99.3177091152603,70.5843548836969,77.4622763675575,59.1237177625039,60.5977896947339,78.428343456493,108.138008968909,70.7063016819722,63.3505368562195,83.7527351020397,100.830036916684,99.2628679735384,72.4364506366106,86.6342794277442,120.415731425188,91.9899275380338,84.1527656265119,118.780342747358,108.326779036067,97.562840952136,131.085180743619,101.090002094885,81.2636277116778,84.0755765236212,68.8300476461207,62.5077025261113,67.3736025458568,55.9503489705834,78.6362152938866,63.476877874405,66.6671942659515,69.377836431972,77.3028972059741,456.53947833272,74.4000347502226,35.3548097792664,30.4118151663076,60.5738631520064,57.3624579495283,46.3922860759536,40.5383884492919,46.9217672512676,58.5894928426682,54.0963130160743,74.7733254447009,85.7053062008919,94.9022371636289,74.671245366623,49.4350674759822,50.5763036706784,53.9672850519335,96.5409615851186,74.6042787341529,71.0058734740407,75.3509913027663,80.1023772002294,81.7783659921114,83.4089924668954,46.0543661696359,59.8165153075638,64.0431280754145,32.6097889795864,26.695216914575,25.9457873549428,25.4094186994885,37.93484269965,44.1354202346923,76.3877555344259,64.7316309264324,47.6677566718604,68.6403532970204,51.7565543498476,99.7337739751589,87.370548472077,51.0209333453166,40.902610282996,38.5954817090694,93.6698674144686,89.0609635321278,53.9414072023106,69.4257400820519,60.315393810145,82.0780661464897,82.6011433874468,71.0286478202388,87.8027752671484,100.102039721246,92.962130127315,99.3011687177372,109.482278502978,123.964243204355,203.568233318018,186.015743865999,46.7176059368084,77.8141624579346,268.119485279613,239.93232245424,82.9510823605978,57.563371402597,87.7112849977194,71.0598514619882,88.7544398659132,90.0912368281121,95.8034298554295,59.4460714656548,78.5332761249295,97.9057124002895,85.3821600364491,374.660654947827,98.9322393901632,198.54314808899,145.458054702743,124.222502598319,31.8588332015911,79.6320486588339,72.859977228505,87.1355468472249,126.684512045852,88.5413226078511,84.5060518660083,87.9751625335563,73.0819625688679,50.5658812697306,55.8718625447493,66.0067476788396,411.59148335633,92.3713412380621,124.313695115227,145.32050975142,136.019959203624,193.886904733451,202.724393381813,365.662403886634,61.0146440965647,100.620233660315,166.278412133441,47.4872408471463,50.2154367024266,37.3940134554566,53.359437769402,45.1387474298918,58.2961673259701,257.555744492598,58.7795829944613,98.2401491504939,62.5957502509625,31.4575323197834,21.3242995244799,47.3570818537502,63.2319759577142,60.4590274038203,61.7753882905774,31.5041303944987,62.7926947258554,64.6555905463379,69.2314234667746,65.8628132445576,70.7494706537615,61.7678706442479,84.3065248398427,84.0236573768735,67.2701711384405,89.4728610845173,29.8757257502621,89.7099276263873,120.619239543224,113.948396369612,168.036930344528,126.210225741611,153.503268148646,111.454953426421,123.838885766765,64.7445443813696,56.4538812265416,53.4058793861621,125.892358695192,110.00343512353,70.0273235850315,49.7694213955598,53.246603081379,50.3618933488669,49.9190601850071,35.2372910319035,35.1313378679549,38.6164289074099,46.4874091128619,44.3536589961919,55.3996516340637,41.0381994343533,37.737612073591,54.9048802449991,44.4894233364808,110.504447786413,145.641600950117,128.389288611353,54.4495682860827,134.421323881477,269.386628928341,342.021650724832,316.811218931986,400.761621225479,559.027336132844,512.157062430217,564.31881019379,458.877306085481,476.252671842399,537.435203598389,22.5218544257663,53.8683579091392,78.0252578296393,57.1300785110491,33.5381060204772,39.7101978252031,59.1176295952297,65.1070780874906,59.6909729840776,61.9108168821304,60.5815526737673,63.9443297298798,66.2045457812069,59.4793665841236,62.3174838168404,46.2004880544581,56.0880137573101,63.8529519734864,63.8733146245125,58.4379712933557,58.2877729055206,63.7138144112022,61.7549731963561,54.6502526537555,65.3119100082395,54.661036698023,59.8174471293966,57.6122668048876,56.4945113598785,53.8696580791429,57.6566188083486,61.2697880376005,59.338501259605,59.8056206977829,77.9342708363811,93.9287773046677,67.8401664491684,62.7423477821031,67.3334928882329,83.8247392654159,78.139460604082
|short_description=p1@Itm2c
}}

Revision as of 02:51, 6 August 2015

Short description:p1@Itm2c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Itm2c_5end
Coexpression cluster:MCL_coexpression_mm9:1759
Association with transcript: 21bp_to_NM_022417, uc011wof.1_5end
EntrezGene:64294
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Itm2c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7182.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I542.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I656.42
CD326+ enterocyte, pool1.CNhs13542.11848-124I327.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I428.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I771.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I870.08
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9175.09
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E747.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F245.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.12
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F118.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E488.85
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8100.18
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A127.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A334.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A228.71
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.86
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3168.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D159.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D278.92
GP2+ M cell, pool1.CNhs13228.11845-124H951.68
GP2+ M cell, pool2.CNhs13231.11846-124I156.00
GP2+ M cell, pool3.CNhs13240.11847-124I242.45
Ileum epithelium, pool1.CNhs13199.10252-104B950.17
Ileum epithelium, pool2.CNhs13232.10253-104C146.12
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C872.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F542.75
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F648.37
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F742.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H131.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H319.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8361.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9365.46
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3316.99
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71000.68
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2161.12
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8576.90
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3389.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C4241.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C4431.26
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.74
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I989.22
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A148.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1259.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1166.76
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5258.87
Mouse Granule cells, donor1.CNhs12131.11713-123C3101.77
Mouse Granule cells, donor2.CNhs12357.11731-123E3118.49
Mouse Granule cells, donor3.CNhs12108.11636-122C7105.22
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6433.72
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1343.27
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7548.04
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7604.20
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2623.09
Mouse Microglia, donor1.CNhs12629.11718-123C8965.91
Mouse Microglia, donor2.CNhs12634.11736-123E82246.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D544.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F553.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D938.28
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1199.67
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5204.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D236.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F231.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D633.09
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3361.18
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3351.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7347.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4102.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4105.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D897.93
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4397.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5634.80
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6493.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6140.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6128.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E183.88
Mouse Schwann, donor1.CNhs12507.11728-123D935.52
Mouse Schwann, donor2.CNhs12573.11746-123F972.47
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3172.47
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7120.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C465.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C837.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F442.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.09
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A768.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I780.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E396.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I883.03
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6183.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1138.59
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I876.44
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1138.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2137.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3110.71
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B663.71
accessory axillary lymph node, adult.CNhs10475.1063-29H954.64
adrenal gland, adult.CNhs10508.49-24D7390.55
adrenal gland, embryo E14.CNhs11038.406-44C5105.48
adrenal gland, embryo E16.CNhs11004.1254-43D6209.47
adrenal gland, embryo E17.CNhs11043.1263-45I1260.36
adrenal gland, embryo E18.CNhs11026.1262-18F5312.15
adrenal gland, neonate N00.CNhs11191.1311-23C1262.58
adrenal gland, neonate N25.CNhs11223.1377-27I3323.59
amnion, adult pregnant day17.5.CNhs10488.583-22A8185.40
aorta, adult.CNhs10498.46-23H134.99
bone (os femoris), adult.CNhs10483.56-12G254.85
bone (os femoris), neonate N02.CNhs11227.1985-43F565.03
bone (os femoris), neonate N16.CNhs11225.1525-43A647.70
bone (os femoris), neonate N20.CNhs11195.1350-25C358.67
cecum, adult.CNhs10467.37-13H442.87
cerebellum, adult.CNhs10494.15-8B2205.53
cerebellum, neonate N30.CNhs11135.1395-42I2256.15
colon, adult.CNhs10468.36-18H742.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C796.69
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D182.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4120.34
corpora quadrigemina, adult.CNhs10501.16-22A4347.36
corpus striatum, adult.CNhs10487.19-21D8485.41
corpus striatum, neonate N00.CNhs11226.630-43F172.50
cortex, adult.CNhs10473.12-14D5413.18
cortex, neonate N30.CNhs11107.1392-42F2467.70
diencephalon, adult.CNhs10482.20-12F2430.12
diencephalon, neonate N30.CNhs11201.1388-42B2407.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1151.74
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2133.12
epididymis, adult.CNhs10490.58-23B2249.69
eyeball, adult.CNhs10484.31-12G437.88
eyeball, embryo E12.CNhs11016.345-16C670.79
eyeball, embryo E14.CNhs10521.399-16E299.32
eyeball, embryo E15.CNhs10593.426-16C970.58
eyeball, embryo E17.CNhs11023.1261-18D477.46
eyeball, neonate N00.CNhs11207.633-15C659.12
eyeball, neonate N01.CNhs11140.1532-43E760.60
eyeball, neonate N02.CNhs11205.1551-44G878.43
eyeball, neonate N16.CNhs11188.777-19A2108.14
forelimb, embryo E11.CNhs10596.335-25E270.71
forelimb, embryo E12.CNhs10600.359-14H263.35
forelimb, embryo E13.CNhs10589.384-1E283.75
forelimb, embryo E14.CNhs10577.413-26A8100.83
forelimb, embryo E15.CNhs11007.437-20E799.26
forelimb, embryo E17.CNhs10598.1517-43C472.44
forelimb, embryo E18.CNhs11008.1520-43B586.63
gonad, embryo E13.CNhs11044.1564-45I6120.42
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C891.99
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D284.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5118.78
heart, embryo E11.CNhs10586.331-24E9108.33
heart, embryo E12.CNhs11015.353-12F597.56
heart, embryo E13.CNhs11013.376-3I9131.09
heart, embryo E14.CNhs10597.403-26D4101.09
heart, embryo E15.CNhs11017.431-16C881.26
heart, embryo E16.CNhs11021.457-17C684.08
heart, embryo E17.CNhs11025.479-18E568.83
heart, embryo E18.CNhs11030.1283-20G362.51
heart, neonate N00.CNhs11213.639-21E367.37
heart, neonate N03.CNhs11221.1349-25I255.95
heart, neonate N10.CNhs11118.749-24G178.64
heart, neonate N16.CNhs11209.782-15G163.48
heart, neonate N20.CNhs11127.821-26I666.67
heart, neonate N25.CNhs11196.1351-25D369.38
heart, neonate N30.CNhs11202.1390-42D277.30
hippocampus, adult.CNhs10478.13-16E8456.54
hippocampus, neonate N00.CNhs11228.627-43G174.40
intestinal mucosa, adult.CNhs10506.860-29I335.35
intestine, adult.CNhs10496.178-9A330.41
intestine, embryo E12.CNhs11019.1251-16I560.57
intestine, embryo E13.CNhs11010.381-16D557.36
intestine, embryo E15.CNhs10602.976-16D846.39
intestine, embryo E16.CNhs10585.463-22H440.54
intestine, embryo E17.CNhs10582.482-18D346.92
intestine, embryo E18.CNhs10526.1289-20F758.59
intestine, neonate N00.CNhs11126.644-26D154.10
intestine, neonate N01.CNhs11192.1322-23E974.77
intestine, neonate N06.CNhs11102.688-20B885.71
intestine, neonate N07.CNhs11095.720-20F294.90
intestine, neonate N10.CNhs11098.755-23A574.67
intestine, neonate N20.CNhs11187.827-18D149.44
intestine, neonate N25.CNhs11121.1352-25E350.58
intestine, neonate N30.CNhs11131.1384-42G153.97
kidney, embryo E14.CNhs10606.411-4I996.54
kidney, embryo E15.CNhs10997.434-16F874.60
kidney, embryo E16.CNhs10584.464-22A571.01
kidney, embryo E17.CNhs11028.483-18I275.35
kidney, embryo E18.CNhs11001.1288-20C780.10
kidney, neonate N00.CNhs11214.646-21G781.78
kidney, neonate N10.CNhs11206.758-6D583.41
kidney, neonate N20.CNhs11113.832-19I146.05
kidney, neonate N25.CNhs11122.1353-25F359.82
kidney, neonate N30.CNhs11203.1385-42H164.04
liver, adult pregnant day01.CNhs10466.508-5B232.61
liver, embryo E12.CNhs10601.355-15F826.70
liver, embryo E13.CNhs10524.378-3H625.95
liver, embryo E14.CNhs10594.409-16E125.41
liver, embryo E15.CNhs10520.433-16D737.93
liver, embryo E16.CNhs10523.462-17F544.14
liver, embryo E17.CNhs10510.481-18A376.39
liver, embryo E18.CNhs10579.499-43G464.73
liver, neonate N00.CNhs11117.641-24F447.67
liver, neonate N03.CNhs11123.1345-25G268.64
liver, neonate N06.CNhs11101.684-20A851.76
liver, neonate N07.CNhs11103.716-20H299.73
liver, neonate N10.CNhs11115.751-24B987.37
liver, neonate N20.CNhs11220.823-25A351.02
liver, neonate N25.CNhs11198.1368-26H140.90
liver, neonate N30.CNhs11106.1382-42D138.60
lung, adult.CNhs10474.28-22B193.67
lung, embryo E12.CNhs10522.354-16G289.06
lung, embryo E14.CNhs10604.404-26F853.94
lung, embryo E15.CNhs11020.432-17C569.43
lung, embryo E16.CNhs10998.458-17B660.32
lung, embryo E17.CNhs10605.480-44A682.08
lung, embryo E18.CNhs10583.1287-20I682.60
lung, neonate N00.CNhs11224.640-42C671.03
lung, neonate N06.CNhs11212.683-20E587.80
lung, neonate N07.CNhs11111.715-19A3100.10
lung, neonate N10.CNhs11219.750-23E692.96
lung, neonate N20.CNhs11109.822-18A499.30
lung, neonate N25.CNhs11119.1359-25C7109.48
lung, neonate N30.CNhs11133.1394-42H2123.96
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1203.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1186.02
mammary gland, adult lactating day02.CNhs10480.595-22B646.72
mammary gland, adult pregnant day19.CNhs10476.588-5H277.81
medulla oblongata, adult.CNhs10477.17-12C2268.12
medulla oblongata, neonate N30.CNhs11200.1396-42A3239.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C782.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C257.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E187.71
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E271.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E388.75
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D790.09
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D895.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D959.45
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D478.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D597.91
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D685.38
olfactory brain, adult.CNhs10489.18-22I9374.66
ovary, adult.CNhs10507.91-2I798.93
ovary, embryo E18.CNhs11040.505-44H7198.54
ovary, neonate N00.CNhs11217.1299-22I4145.46
oviduct, adult pregnant day01.CNhs10500.988-6G6124.22
pancreas, adult.CNhs10486.34-16E431.86
pancreas, embryo E14.CNhs11012.405-44F479.63
pancreas, embryo E15.CNhs11042.1556-45F272.86
pancreas, embryo E16.CNhs11003.460-26E587.14
pancreas, embryo E17.CNhs10599.1558-45G3126.68
pancreas, embryo E18.CNhs10580.1535-43I788.54
pancreas, neonate N00.CNhs11105.645-26G984.51
pancreas, neonate N01.CNhs11138.1531-43D787.98
pancreas, neonate N02.CNhs11139.1539-43D873.08
pancreas, neonate N16.CNhs11136.787-43B650.57
pancreas, neonate N25.CNhs11094.1555-45E255.87
pancreas, neonate N30.CNhs11182.1548-44H566.01
pituitary gland, adult.CNhs10493.21-1G8411.59
pituitary gland, embryo E12.CNhs11018.346-16E692.37
pituitary gland, embryo E13.CNhs11009.370-44C7124.31
pituitary gland, embryo E14.CNhs11037.398-44A5145.32
pituitary gland, embryo E15.CNhs10592.427-16B9136.02
pituitary gland, embryo E16.CNhs11036.449-43F6193.89
pituitary gland, embryo E17.CNhs11039.1265-44F5202.72
pituitary gland, neonate N00.CNhs11190.1308-22E9365.66
placenta, adult pregnant day10.CNhs10472.539-13I761.01
placenta, adult pregnant day17.CNhs10464.577-18G3100.62
prostate, adult.CNhs10470.859-1F8166.28
skin, adult.CNhs10492.30-1C347.49
skin, neonate N00.CNhs11124.650-25G450.22
skin, neonate N03.CNhs11215.662-22H337.39
skin, neonate N06.CNhs11097.693-20I553.36
skin, neonate N10.CNhs11108.762-6C445.14
small intestine, neonate N16.CNhs11114.790-21I158.30
spinal cord, adult.CNhs10505.24-13C9257.56
spleen, adult.CNhs10465.25-2G258.78
spleen, embryo E16.CNhs11035.461-43C198.24
spleen, embryo E18.CNhs11011.1271-21F262.60
spleen, neonate N10.CNhs11116.752-24D131.46
spleen, neonate N20.CNhs11112.824-19H121.32
spleen, neonate N25.CNhs11099.1354-25G347.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C663.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C960.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D361.78
stomach, adult.CNhs10503.33-1H631.50
stomach, embryo E12.CNhs10588.356-43E362.79
stomach, embryo E15.CNhs10603.1252-16G864.66
stomach, embryo E16.CNhs11022.459-17D469.23
stomach, embryo E17.CNhs11006.1035-18D565.86
stomach, embryo E18.CNhs10999.1286-20C670.75
stomach, neonate N03.CNhs11193.1340-24B861.77
stomach, neonate N07.CNhs11210.718-18A984.31
stomach, neonate N25.CNhs11104.1355-25E484.02
stomach, neonate N30.CNhs11134.1386-42I167.27
submandibular gland, adult.CNhs10469.59-29C189.47
testis, adult.CNhs10504.57-7G529.88
testis, embryo E13.CNhs11031.389-23F589.71
testis, embryo E15.CNhs11034.443-27C5120.62
testis, embryo E16.CNhs11033.470-26G5113.95
testis, embryo E17.CNhs11029.486-18I5168.04
testis, embryo E18.CNhs11027.503-18G5126.21
testis, neonate N00.CNhs11189.1300-22B7153.50
testis, neonate N07.CNhs11222.726-26I4111.45
testis, neonate N10.CNhs11204.763-44D9123.84
testis, neonate N20.CNhs11110.839-18H364.74
testis, neonate N30.CNhs11130.1391-42E256.45
thymus, adult.CNhs10471.38-12B553.41
thymus, embryo E14.CNhs11041.402-44I4125.89
thymus, embryo E15.CNhs11005.430-45I2110.00
thymus, embryo E16.CNhs11002.456-26C570.03
thymus, embryo E17.CNhs10581.478-18C149.77
thymus, embryo E18.CNhs10595.1273-19G453.25
thymus, neonate N02.CNhs11181.1541-43F850.36
thymus, neonate N03.CNhs11137.2104-43C749.92
thymus, neonate N06.CNhs11197.681-26C435.24
thymus, neonate N07.CNhs11211.713-19D335.13
thymus, neonate N10.CNhs11194.748-24E438.62
thymus, neonate N20.CNhs11186.820-7A246.49
thymus, neonate N25.CNhs11125.1362-25G744.35
thymus, neonate N30.CNhs11132.1393-42G255.40
tongue, adult.CNhs10499.32-1B441.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H337.74
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F754.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G544.49
urinary bladder, adult.CNhs10481.879-12E4110.50
uterus, adult pregnant day19.CNhs10497.590-15F5145.64
uterus, adult.CNhs10509.92-27E5128.39
vagina, adult.CNhs10502.89-27D554.45
vesicular gland, adult.CNhs10491.51-27F8134.42
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1269.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2342.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3316.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7400.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4559.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5512.16
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6564.32
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7458.88
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8476.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9537.44
whole body, embryo E11.CNhs11014.324-5I822.52
whole body, embryo E12.CNhs10587.857-27C953.87
whole body, embryo E13.CNhs10512.372-23H278.03
whole body, embryo E14.5.CNhs10578.420-27D257.13
whole body, embryo E14.CNhs10519.395-14B133.54
whole body, embryo E16.CNhs10514.453-14F239.71
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G559.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G565.11
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G559.69
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G561.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G560.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G563.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G566.20
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G559.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G562.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G546.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G556.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G563.85
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G563.87
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G558.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G558.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G563.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G561.75
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G554.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G565.31
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G554.66
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G559.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G557.61
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G556.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G553.87
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G557.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G561.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G559.34
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G559.81
whole body, embryo E17.5.CNhs10513.490-9F977.93
whole body, embryo E17.CNhs10517.475-3I593.93
whole body, embryo E18.CNhs10516.493-3B367.84
whole body, neonate N00.CNhs10525.657-19C262.74
whole body, neonate N01.CNhs10576.659-23C667.33
whole body, neonate N06.CNhs10515.692-21D183.82
whole body, neonate N10.CNhs10518.761-6B478.14





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system4.13e-1973
nervous system4.29e-1875
structure with developmental contribution from neural crest1.85e-1592
regional part of nervous system3.27e-1554
neural tube3.93e-1452
neural rod3.93e-1452
future spinal cord3.93e-1452
neural keel3.93e-1452
ectoderm-derived structure2.10e-1395
ectoderm2.10e-1395
presumptive ectoderm2.10e-1395
brain6.84e-1347
future brain6.84e-1347
regional part of brain2.23e-1246
neurectoderm3.10e-1264
neural plate3.10e-1264
presumptive neural plate3.10e-1264
anterior neural tube8.13e-1040
anatomical conduit8.54e-10122
ecto-epithelium8.97e-1073
regional part of forebrain2.33e-0939
forebrain2.33e-0939
future forebrain2.33e-0939
tube4.97e-09114
pre-chordal neural plate3.18e-0849
gray matter3.95e-0734
occipital lobe4.10e-0710
visual cortex4.10e-0710
neocortex4.10e-0710
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