FFCP PHASE1:Mm9::chr1:95240075..95240101,-: Difference between revisions
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{{FFCP|EntrezGene=269224|HGNC=|UniProt=D3YUI8|association_with_transcript=-16bp_to_ENSMUST00000128253_5end|description=CAGE_peak_2_at_Pask_5end|id=chr1:95240075..95240101,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!3.83e-08!49;UBERON:0002346!7.36e-08!71;UBERON:0003075!7.36e-08!71;UBERON:0007284!7.36e-08!71;UBERON:0000033!3.83e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0010371,8.34e-09,73;UBERON:0005085,6.25e-08,13;UBERON:0002346,8.69e-08,64;UBERON:0003075,8.69e-08,64;UBERON:0007284,8.69e-08,64;UBERON:0003056,1.43e-07,49;UBERON:0000970,4.13e-07,9;UBERON:0000019,4.13e-07,9;UBERON:0000047,4.13e-07,9;UBERON:0010312,4.13e-07,9;UBERON:0004088,4.13e-07,9;UBERON:0002104,4.13e-07,9;UBERON:0001456,4.13e-07,9;UBERON:0003072,4.13e-07,9;UBERON:0004128,4.13e-07,9;UBERON:0003071,4.13e-07,9|phase1_expression=2.08193501236232,0,0.909998478779072,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0.281577444303333,0.936258105287974,0.513653904676515,0.398860794976682,0.171200729931206,0.262261207256992,1.99865857089398,0.809901069559304,1.39912375625629,0.157731082679119,0.274228867211478,0.84877930359606,1.87095238332354,1.09220046320974,1.30599894569468,0.47997726838022,0.22940928106717,1.14846392823004,0,0.646413698057667,0.570070258369122,0.504060259519861,0.443461021310609,1.90509202037889,2.46025915033828,0,2.02196133825892,1.16364251750945,1.42918549383658,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,1.38486499773135,2.23029248682932,1.46837401729345,0,0.65407546914134,1.31811709640683,1.1665793944457,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0.85960031981627,0,1.41621522601718,1.5869729378161,1.26766280701236,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0.518448061542388,1.08004750665353,1.05162480675691,1.42825492201902,0.662605622854841,1.22490799214954,0.862609239164127,0.919218786610021,0,0.638436690425939,0.921639199537461,1.97829431595291,1.64677758484337,1.56274011167028,2.23346399201105,1.68828783009504,1.37518422999129,0.294628585473668,0.996601765593721,1.4911955666024,0.37863096666592,0.68014404096107,0.289864488701678,0,0,0.539703191637817,0,0,0.702222100658759,1.53387290320252,1.29893002301434,0.70667914902068,1.12674735821344,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0,0.34255163915718,0.776813650941515,1.03909497345377,1.38788261412909,0.304465478312141,0.461230994512117,1.05505848386836,0.352766121407114,0.753999547978053,0.494389935468748,0.578397427679647,0.884610551949874,0.485300549842228,1.76673214768315,0.484875253135222,0,1.17112318804619,2.30391377494801,0,0.479260498023681,0,0.762421362438388,2.24685959107234,4.11750542536764,1.88481528169297,1.91206752211504,2.30143911597297,0.83115217823824,1.62241263067758,0.509196819251581,2.23932547098167,1.76905930903572,1.26265113531884,2.21204753036596,2.06911893990126,2.16074555766419,1.65775299619287,2.17716797284249,2.69038812598185,2.71735001223214,1.81092359517311,1.29340795759705,1.32374256117473,1.23165786914764,1.7535658594206,0.834141747676794,1.39300866608867,1.02891068203972,0.398068533636986,0.702213187313235,0,0.568326998791185,1.03562886267751,0.234526059981096,0.540186184383045,0.23674473558521,0.590292695242212,1.07986979021165,0,0.536546802799238,0,0.329119699826961,0.492502392237286,0,0.584799949701329,0.219550115291051,0.268412837520744,2.10289948564127,1.44066457330998,0.330418782983798,0.528901133327089,1.70630600428187,1.39342003116263,1.54640953586512,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.569003702859245,1.14248512609729,2.25415471346161,2.03651327845314,0.581857461502877,0.911765658574141,1.07502113111237,0.147610147979602,1.56998727841375,0.493588655687202,1.1858105083486,1.66845105716094,1.96558995113203,0.899448449539415,1.42002084971952,1.20588579876208,0.50925170356284,0.863088412352432,0,0.823684239564244,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0.369506380333209,2.08440552947533,2.77040459951444,1.01847051465113,1.17345124144251,1.84256883185997,0.952174563544055,0.195133647857799,0.630540576424764,0.44292937929755,0.637819074629948,0.81931657357869,0,0.144649058581512,0,0,1.47529281905711,1.10374698521893,0.642202359951168,1.64096361229084,0.655739781506702,0.757412781613119,0.94652465824877,1.56175497718655,1.72338718186239,0.716906393857656,0.222798674082394,0,0.809621403349789,1.16902343164525,1.18586333383957,0.963963949265421,0.709700426041343,1.42452482933804,1.14020871547503,0.659880491890142,0,0.971122544619926,0.604647113929502,0.943025398779491,1.18120757152309,1.84461088766356,0.775284879504663,0.363533729477506,1.06949213515416,0,0,0,1.36175842301515,1.44048875225048,1.4229455216103,0.643011105094777,1.77340233642274,0.356737635204141,0.329098041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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269224 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YUI8 | |||
|association_with_transcript=-16bp_to_ENSMUST00000128253_5end | |||
|cluster_id=chr1:95240075..95240101,- | |||
|description=CAGE_peak_2_at_Pask_5end | |||
|id=chr1:95240075..95240101,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!3.83e-08!49;UBERON:0002346!7.36e-08!71;UBERON:0003075!7.36e-08!71;UBERON:0007284!7.36e-08!71;UBERON:0000033!3.83e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,8.34e-09,73;UBERON:0005085,6.25e-08,13;UBERON:0002346,8.69e-08,64;UBERON:0003075,8.69e-08,64;UBERON:0007284,8.69e-08,64;UBERON:0003056,1.43e-07,49;UBERON:0000970,4.13e-07,9;UBERON:0000019,4.13e-07,9;UBERON:0000047,4.13e-07,9;UBERON:0010312,4.13e-07,9;UBERON:0004088,4.13e-07,9;UBERON:0002104,4.13e-07,9;UBERON:0001456,4.13e-07,9;UBERON:0003072,4.13e-07,9;UBERON:0004128,4.13e-07,9;UBERON:0003071,4.13e-07,9 | |||
|phase1_expression=2.08193501236232,0,0.909998478779072,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0.281577444303333,0.936258105287974,0.513653904676515,0.398860794976682,0.171200729931206,0.262261207256992,1.99865857089398,0.809901069559304,1.39912375625629,0.157731082679119,0.274228867211478,0.84877930359606,1.87095238332354,1.09220046320974,1.30599894569468,0.47997726838022,0.22940928106717,1.14846392823004,0,0.646413698057667,0.570070258369122,0.504060259519861,0.443461021310609,1.90509202037889,2.46025915033828,0,2.02196133825892,1.16364251750945,1.42918549383658,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,1.38486499773135,2.23029248682932,1.46837401729345,0,0.65407546914134,1.31811709640683,1.1665793944457,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0.85960031981627,0,1.41621522601718,1.5869729378161,1.26766280701236,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0.518448061542388,1.08004750665353,1.05162480675691,1.42825492201902,0.662605622854841,1.22490799214954,0.862609239164127,0.919218786610021,0,0.638436690425939,0.921639199537461,1.97829431595291,1.64677758484337,1.56274011167028,2.23346399201105,1.68828783009504,1.37518422999129,0.294628585473668,0.996601765593721,1.4911955666024,0.37863096666592,0.68014404096107,0.289864488701678,0,0,0.539703191637817,0,0,0.702222100658759,1.53387290320252,1.29893002301434,0.70667914902068,1.12674735821344,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0,0.34255163915718,0.776813650941515,1.03909497345377,1.38788261412909,0.304465478312141,0.461230994512117,1.05505848386836,0.352766121407114,0.753999547978053,0.494389935468748,0.578397427679647,0.884610551949874,0.485300549842228,1.76673214768315,0.484875253135222,0,1.17112318804619,2.30391377494801,0,0.479260498023681,0,0.762421362438388,2.24685959107234,4.11750542536764,1.88481528169297,1.91206752211504,2.30143911597297,0.83115217823824,1.62241263067758,0.509196819251581,2.23932547098167,1.76905930903572,1.26265113531884,2.21204753036596,2.06911893990126,2.16074555766419,1.65775299619287,2.17716797284249,2.69038812598185,2.71735001223214,1.81092359517311,1.29340795759705,1.32374256117473,1.23165786914764,1.7535658594206,0.834141747676794,1.39300866608867,1.02891068203972,0.398068533636986,0.702213187313235,0,0.568326998791185,1.03562886267751,0.234526059981096,0.540186184383045,0.23674473558521,0.590292695242212,1.07986979021165,0,0.536546802799238,0,0.329119699826961,0.492502392237286,0,0.584799949701329,0.219550115291051,0.268412837520744,2.10289948564127,1.44066457330998,0.330418782983798,0.528901133327089,1.70630600428187,1.39342003116263,1.54640953586512,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.569003702859245,1.14248512609729,2.25415471346161,2.03651327845314,0.581857461502877,0.911765658574141,1.07502113111237,0.147610147979602,1.56998727841375,0.493588655687202,1.1858105083486,1.66845105716094,1.96558995113203,0.899448449539415,1.42002084971952,1.20588579876208,0.50925170356284,0.863088412352432,0,0.823684239564244,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0.369506380333209,2.08440552947533,2.77040459951444,1.01847051465113,1.17345124144251,1.84256883185997,0.952174563544055,0.195133647857799,0.630540576424764,0.44292937929755,0.637819074629948,0.81931657357869,0,0.144649058581512,0,0,1.47529281905711,1.10374698521893,0.642202359951168,1.64096361229084,0.655739781506702,0.757412781613119,0.94652465824877,1.56175497718655,1.72338718186239,0.716906393857656,0.222798674082394,0,0.809621403349789,1.16902343164525,1.18586333383957,0.963963949265421,0.709700426041343,1.42452482933804,1.14020871547503,0.659880491890142,0,0.971122544619926,0.604647113929502,0.943025398779491,1.18120757152309,1.84461088766356,0.775284879504663,0.363533729477506,1.06949213515416,0,0,0,1.36175842301515,1.44048875225048,1.4229455216103,0.643011105094777,1.77340233642274,0.356737635204141,0.329098041204242,0.913394847343798,0.469343416127421,0.63549621259146,0.882113592219848,1.15420377059036,1.45317984026315,1.26657142349127,0.477489376012546,0.984845398470368,0.291480836629851,1.29797711407357,1.36696704638282,0.82554747185289,1.29636169158798,1.69531611304222,0.683471138605126,1.14389086603261,0.509935289981566,0.979660166265606,0.690999869022119,0,0.790839983952838,1.62655573701479,1.29606408986162,0.836353184057875,0.655087691238533,0.674321731924103,0.826534557253359,0.26175594198403,1.16653475962614,0.621339313086926,0.56369293868419,2.54178128274764,0.992750942742586,1.16670713006429,0.774958940866387,1.68956125490778,1.76035857968631,0.911430693907651,1.36317147753424,2.65742532908607,3.16833006883652,0.632022241256357,1.01362607645082,0.821687657318618,0.51968329191118,1.07416017400489,1.19208812868759,0.841368146639782,1.32920574457119,1.21159739937777,0.914481679859998,1.91569751759997,0.6822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| |||
|short_description=p2@Pask | |||
}} |
Revision as of 05:46, 6 August 2015
Short description: | p2@Pask |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pask_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENSMUST00000128253_5end |
EntrezGene: | 269224 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 8.34e-09 | 73 |
ectodermal placode | 6.25e-08 | 13 |
neurectoderm | 8.69e-08 | 64 |
neural plate | 8.69e-08 | 64 |
presumptive neural plate | 8.69e-08 | 64 |
pre-chordal neural plate | 1.43e-07 | 49 |
eye | 4.13e-07 | 9 |
camera-type eye | 4.13e-07 | 9 |
simple eye | 4.13e-07 | 9 |
immature eye | 4.13e-07 | 9 |
ocular region | 4.13e-07 | 9 |
visual system | 4.13e-07 | 9 |
face | 4.13e-07 | 9 |
optic cup | 4.13e-07 | 9 |
optic vesicle | 4.13e-07 | 9 |
eye primordium | 4.13e-07 | 9 |