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FFCP PHASE1:Mm9::chr1:9788067..9788121,+: Difference between revisions

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{{FFCP|EntrezGene=170755|HGNC=|MCL_coexpression_id=1274|UniProt=Q9ERE3,Q8VEK1|association_with_transcript=-89bp_to_ENSMUST00000166384,ENSMUST00000168907,NM_133220,NM_177547,uc007agu.1,uc007agv.1,uc007agw.1,uc011wid.1_5end|description=CAGE_peak_3_at_Sgk3_5end|id=chr1:9788067..9788121,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.60e-12!22;UBERON:0007499!1.60e-12!22;UBERON:0006925!1.60e-12!22;UBERON:0009497!1.60e-12!22;UBERON:0000015!1.60e-12!22;UBERON:0002423!1.60e-12!22;UBERON:0006235!1.60e-12!22;UBERON:0008835!1.60e-12!22;UBERON:0003894!1.60e-12!22;UBERON:0004161!1.60e-12!22;UBERON:0008836!1.60e-12!22;UBERON:0009854!3.79e-11!23;UBERON:0009856!3.79e-11!23;UBERON:0002365!6.02e-10!25;UBERON:0002330!6.02e-10!25;UBERON:0005172!3.42e-09!49;UBERON:0005173!3.42e-09!49;UBERON:0002417!3.42e-09!49;UBERON:0000916!3.42e-09!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.08e-14,22;UBERON:0007499,1.08e-14,22;UBERON:0006925,1.08e-14,22;UBERON:0009497,1.08e-14,22;UBERON:0000015,1.08e-14,22;UBERON:0002423,1.08e-14,22;UBERON:0006235,1.08e-14,22;UBERON:0008835,1.08e-14,22;UBERON:0003894,1.08e-14,22;UBERON:0004161,1.08e-14,22;UBERON:0008836,1.08e-14,22;UBERON:0009854,1.42e-13,23;UBERON:0009856,1.42e-13,23;UBERON:0002365,1.25e-11,25;UBERON:0002330,1.25e-11,25;UBERON:0005172,2.18e-08,49;UBERON:0005173,2.18e-08,49;UBERON:0002417,2.18e-08,49;UBERON:0000916,2.18e-08,49;UBERON:0000160,4.92e-08,31;UBERON:0003914,5.62e-08,47|phase1_expression=0.80074423552397,10.8182376368202,9.55498402718026,19.660173734944,20.0358291978539,1.00727563147134,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0.999329285446988,1.82227740650843,1.39912375625629,1.10411757875383,0.822686601634433,0.84877930359606,2.29616883407888,0.595745707205312,1.30599894569468,0.319984845586813,0,3.44539178469012,2.58457197695445,1.939241094173,2.09025761402011,5.29263272495855,0.665191531965914,1.90509202037889,1.23012957516914,0,1.1554064790051,0.332469290716985,0.408338712524738,1.25559489221072,2.3440060335714,0,2.94115744015507,1.36609096991689,1.45653105909346,0.125896817975577,0,0,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,0.419959264876088,1.43752564364972,1.67782606057736,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,2.20231761998777,0.766124028511126,0.768032666281217,0.263772575460388,0.274462930807229,0,1.3959149950069,1.12552522006336,0.916789486660861,0.294628585473668,0.142371680799103,0.186399445825301,1.06016670666458,1.058001841495,4.63783181922684,4.30211938490693,2.03991400112325,6.47643829965381,4.54843492213368,4.48026887097336,4.0728881838208,0.340860645156116,0.259786004602869,0.70667914902068,0.281686839553361,0,0,7.11066703153331,0,0.253359865475099,1.01104889002957,5.59501010623394,1.29468941823586,0.593768556259299,0,0.304465478312141,0.922461989024234,0.60289056221049,0.940709657085638,0.628332956648377,18.7868175478124,0.722996784599558,2.65383165584962,0.647067399789637,1.32504911076236,0.969750506270444,0,1.75668478206928,1.25668024088073,1.02182822083437,1.55759661857696,2.39961092397363,1.01656181658452,0.898743836428936,0.457500602818626,0,0.521472960576829,0.511430914660661,0.41557608911912,1.29793010454206,1.2220723662038,0.995255764880744,0.252722758433675,0.841767423545896,0.520481771850815,0,0.540186389416048,0.30140963567143,0.816437989815934,0.768682321709099,0.937017245597288,0.517406741478031,0,1.13463648100692,0.703804496655795,0,0,0.696504333044333,0,1.19420560091096,2.1066395619397,1.54408744268829,1.13665399758237,1.03562886267751,0.234526059981096,0.180062061461015,1.18372367792605,1.57411385397923,1.69693824176116,0.930135779001631,0.268273401399619,2.33530684734339,1.81015834904829,1.31333971263276,2.35099547682982,1.75439984910399,3.95190207523891,3.22095405024892,0.210289948564127,0.308713837137853,2.31293148088659,2.90895623329899,0,0.696710015581316,2.19074684247559,8.47070803418039,12.008414367623,15.978952593455,2.84717436926707,18.1168850196412,19.604146286421,20.2935601481974,15.0122347081723,3.59527763461689,3.45820879799511,3.58454291857861,0.189667900953082,0.571242563048644,2.25415471346161,0.814605311381257,3.10323979468201,3.7873342740772,6.70307293517127,5.31396532726568,6.59394656933774,4.93588655687202,7.70776830426587,2.00214126859313,2.75182593158484,3.14806957338795,5.68008339887808,6.02942899381042,5.85639459097266,6.61701116136864,11.5116011010275,7.68771956926628,46.0058260887535,16.3742016974142,10.2972432127805,10.1031551178845,7.89348619496414,11.0962009913574,0.739012760666419,0.757965647081939,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,1.10344600874334,0.44292937929755,0.159454768657487,0.983179888294428,0.518054945597687,0.57859623432604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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:170755
|HGNC=
|MCL_coexpression_id=1274
|TSSclassifier=NA
|UniProt=uniprot:Q9ERE3,uniprot:Q8VEK1
|association_with_transcript=-89bp_to_ENSMUST00000166384,ENSMUST00000168907,NM_133220,NM_177547,uc007agu.1,uc007agv.1,uc007agw.1,uc011wid.1_5end
|cluster_id=chr1:9788067..9788121,+
|description=CAGE_peak_3_at_Sgk3_5end
|id=chr1:9788067..9788121,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!1.60e-12!22;UBERON:0007499!1.60e-12!22;UBERON:0006925!1.60e-12!22;UBERON:0009497!1.60e-12!22;UBERON:0000015!1.60e-12!22;UBERON:0002423!1.60e-12!22;UBERON:0006235!1.60e-12!22;UBERON:0008835!1.60e-12!22;UBERON:0003894!1.60e-12!22;UBERON:0004161!1.60e-12!22;UBERON:0008836!1.60e-12!22;UBERON:0009854!3.79e-11!23;UBERON:0009856!3.79e-11!23;UBERON:0002365!6.02e-10!25;UBERON:0002330!6.02e-10!25;UBERON:0005172!3.42e-09!49;UBERON:0005173!3.42e-09!49;UBERON:0002417!3.42e-09!49;UBERON:0000916!3.42e-09!49
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.08e-14,22;UBERON:0007499,1.08e-14,22;UBERON:0006925,1.08e-14,22;UBERON:0009497,1.08e-14,22;UBERON:0000015,1.08e-14,22;UBERON:0002423,1.08e-14,22;UBERON:0006235,1.08e-14,22;UBERON:0008835,1.08e-14,22;UBERON:0003894,1.08e-14,22;UBERON:0004161,1.08e-14,22;UBERON:0008836,1.08e-14,22;UBERON:0009854,1.42e-13,23;UBERON:0009856,1.42e-13,23;UBERON:0002365,1.25e-11,25;UBERON:0002330,1.25e-11,25;UBERON:0005172,2.18e-08,49;UBERON:0005173,2.18e-08,49;UBERON:0002417,2.18e-08,49;UBERON:0000916,2.18e-08,49;UBERON:0000160,4.92e-08,31;UBERON:0003914,5.62e-08,47
|phase1_expression=0.80074423552397,10.8182376368202,9.55498402718026,19.660173734944,20.0358291978539,1.00727563147134,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0.999329285446988,1.82227740650843,1.39912375625629,1.10411757875383,0.822686601634433,0.84877930359606,2.29616883407888,0.595745707205312,1.30599894569468,0.319984845586813,0,3.44539178469012,2.58457197695445,1.939241094173,2.09025761402011,5.29263272495855,0.665191531965914,1.90509202037889,1.23012957516914,0,1.1554064790051,0.332469290716985,0.408338712524738,1.25559489221072,2.3440060335714,0,2.94115744015507,1.36609096991689,1.45653105909346,0.125896817975577,0,0,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,0.419959264876088,1.43752564364972,1.67782606057736,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,2.20231761998777,0.766124028511126,0.768032666281217,0.263772575460388,0.274462930807229,0,1.3959149950069,1.12552522006336,0.916789486660861,0.294628585473668,0.142371680799103,0.186399445825301,1.06016670666458,1.058001841495,4.63783181922684,4.30211938490693,2.03991400112325,6.47643829965381,4.54843492213368,4.48026887097336,4.0728881838208,0.340860645156116,0.259786004602869,0.70667914902068,0.281686839553361,0,0,7.11066703153331,0,0.253359865475099,1.01104889002957,5.59501010623394,1.29468941823586,0.593768556259299,0,0.304465478312141,0.922461989024234,0.60289056221049,0.940709657085638,0.628332956648377,18.7868175478124,0.722996784599558,2.65383165584962,0.647067399789637,1.32504911076236,0.969750506270444,0,1.75668478206928,1.25668024088073,1.02182822083437,1.55759661857696,2.39961092397363,1.01656181658452,0.898743836428936,0.457500602818626,0,0.521472960576829,0.511430914660661,0.41557608911912,1.29793010454206,1.2220723662038,0.995255764880744,0.252722758433675,0.841767423545896,0.520481771850815,0,0.540186389416048,0.30140963567143,0.816437989815934,0.768682321709099,0.937017245597288,0.517406741478031,0,1.13463648100692,0.703804496655795,0,0,0.696504333044333,0,1.19420560091096,2.1066395619397,1.54408744268829,1.13665399758237,1.03562886267751,0.234526059981096,0.180062061461015,1.18372367792605,1.57411385397923,1.69693824176116,0.930135779001631,0.268273401399619,2.33530684734339,1.81015834904829,1.31333971263276,2.35099547682982,1.75439984910399,3.95190207523891,3.22095405024892,0.210289948564127,0.308713837137853,2.31293148088659,2.90895623329899,0,0.696710015581316,2.19074684247559,8.47070803418039,12.008414367623,15.978952593455,2.84717436926707,18.1168850196412,19.604146286421,20.2935601481974,15.0122347081723,3.59527763461689,3.45820879799511,3.58454291857861,0.189667900953082,0.571242563048644,2.25415471346161,0.814605311381257,3.10323979468201,3.7873342740772,6.70307293517127,5.31396532726568,6.59394656933774,4.93588655687202,7.70776830426587,2.00214126859313,2.75182593158484,3.14806957338795,5.68008339887808,6.02942899381042,5.85639459097266,6.61701116136864,11.5116011010275,7.68771956926628,46.0058260887535,16.3742016974142,10.2972432127805,10.1031551178845,7.89348619496414,11.0962009913574,0.739012760666419,0.757965647081939,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,1.10344600874334,0.44292937929755,0.159454768657487,0.983179888294428,0.518054945597687,0.578596234326046,0,0.54390568381871,0.491764273019036,0,0.963303539926752,1.75817529888305,0,0.757412781613119,0.631016438832513,0.390438744296638,0.430846795465598,1.43381278771531,0.445597348164788,1.13230612315533,1.61924280669958,0.292255857911312,0.395287777946524,1.28528526568723,0.283880170416537,1.24645922567079,0.325773918707152,0.824850614862677,0,0.485561272309963,0.302323556964751,0.377210159511796,0.295301892880773,0,3.6179961043551,0.363533729477506,0,0,0,1.03135543248187,0.680879211507576,0,0.258717367565509,0.428674070063185,0,0.178368817602071,0.987294123612726,0,3.28540391289194,2.75381692122966,0,0.8244312647074,0.645857706783622,0.904693873922338,0.835606408021955,1.80554989719567,10.2018292820448,2.78137953015765,1.70870880797853,0.82554747185289,0.740778109478847,1.31857919903284,1.36694227721025,1.60144721244566,0.849892149969277,0.419854356970974,0.690999869022119,0.954670618015114,0,0.813277868507395,0.86404272657441,0,1.31017538247707,0.809186078308924,2.31429676030941,0.785267825952089,0.129614973291793,0.621339313086926,1.12738587736838,3.13984746692355,2.64733584731356,2.33341426012857,2.0665571756437,1.85851738039856,5.39843297770468,5.07797100891405,4.8235298435827,2.65742532908607,2.59227005632079,0,0.405450430580328,0.205421914329655,0,0.358053391334963,0.596044064343795,0.360586348559907,0.295379054349154,0.504832249740738,0.228620419965,0.201652370273681,0.292373642219257,0,0.116876902181569,3.40095575422817,0.443971906748129,0.717710852875806,0.503653849092235,0.386379188064381,1.68914227906064,1.09890974560359,0.857473516316263,0.501572104035363,0,0.920650473014354,0.572895513439397,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,1.35942722695261,0,0.31136204275253,1.19707462020309,0.512200817262403,0.486213434136588,1.04806581313991,2.5738091183002,2.00022055021454,1.23621034343337,2.24643446714271,2.27427490587418,2.5347929989024,0.943131706930381,1.96647165686753,1.40855335290712,2.01024141344646,4.28664322154766,1.97003354106254,1.35036454324594,2.06042950401653,2.50238164228475,2.05721551431249,1.4198064492747,1.1921809497366,2.32554266611726,1.97629698872194,1.18460451048347,1.82927972872773,1.05227884575137,1.35804113845862,1.12228454331548,1.77952527186261,1.57607171800902,1.63692417267876,1.70430525304563,0.964533054905707,0,0.935726433781634,2.36358159453128,0.382576664137687,1.10295709559758,0.927471342481686
|short_description=p3@Sgk3
}}

Revision as of 06:23, 6 August 2015

Short description:p3@Sgk3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sgk3_5end
Coexpression cluster:MCL_coexpression_mm9:1274
Association with transcript: -89bp_to_ENSMUST00000166384, ENSMUST00000168907, NM_133220, NM_177547, uc007agu.1, uc007agv.1, uc007agw.1, uc011wid.1_5end
EntrezGene:170755
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sgk3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.66
CD326+ enterocyte, pool2.CNhs13197.11849-124I420.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.60
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A818.79
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H48.47
intestine, embryo E17.CNhs10582.482-18D312.01
intestine, embryo E18.CNhs10526.1289-20F715.98
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E918.12
intestine, neonate N06.CNhs11102.688-20B819.60
intestine, neonate N07.CNhs11095.720-20F220.29
intestine, neonate N10.CNhs11098.755-23A515.01
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G73.79
kidney, neonate N10.CNhs11206.758-6D56.70
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F36.59
kidney, neonate N30.CNhs11203.1385-42H14.94
liver, adult pregnant day01.CNhs10466.508-5B27.71
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F56.03
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F411.51
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A846.01
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B910.30
liver, neonate N20.CNhs11220.823-25A310.10
liver, neonate N25.CNhs11198.1368-26H17.89
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B75.40
testis, neonate N07.CNhs11222.726-26I45.08
testis, neonate N10.CNhs11204.763-44D94.82
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver1.08e-1422
epithelial sac1.08e-1422
digestive gland1.08e-1422
epithelium of foregut-midgut junction1.08e-1422
anatomical boundary1.08e-1422
hepatobiliary system1.08e-1422
foregut-midgut junction1.08e-1422
hepatic diverticulum1.08e-1422
liver primordium1.08e-1422
septum transversum1.08e-1422
liver bud1.08e-1422
digestive tract diverticulum1.42e-1323
sac1.42e-1323
exocrine gland1.25e-1125
exocrine system1.25e-1125
abdomen element2.18e-0849
abdominal segment element2.18e-0849
abdominal segment of trunk2.18e-0849
abdomen2.18e-0849
intestine4.92e-0831
epithelial tube5.62e-0847
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