FFCP PHASE1:Mm9::chr2:157386400..157386411,+: Difference between revisions
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{{FFCP|EntrezGene=18111|HGNC=|MCL_coexpression_id=1320|UniProt=|association_with_transcript=-333bp_to_ENSMUST00000134513_5end|description=CAGE_peak_5_at_Nnat_5end|id=chr2:157386400..157386411,+|ontology_enrichment_celltype=CL:0000117!6.65e-10!23;CL:0000337!6.65e-10!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!1.30e-11!49;UBERON:0000007!5.61e-11!8;UBERON:0003296!5.61e-11!8;UBERON:0010133!5.61e-11!8;UBERON:0000033!7.18e-10!63;UBERON:0004121!2.38e-09!102;UBERON:0000924!2.38e-09!102;UBERON:0006601!2.38e-09!102;UBERON:0002346!2.56e-09!71;UBERON:0003075!2.56e-09!71;UBERON:0007284!2.56e-09!71;UBERON:0002780!6.19e-09!39;UBERON:0001890!6.19e-09!39;UBERON:0006240!6.19e-09!39;UBERON:0003080!1.50e-08!40;UBERON:0001894!2.68e-08!10;UBERON:0006222!2.68e-08!10;UBERON:0002616!8.43e-08!49;UBERON:0000955!1.66e-07!50;UBERON:0006238!1.66e-07!50;UBERON:0001049!4.22e-07!52;UBERON:0005068!4.22e-07!52;UBERON:0006241!4.22e-07!52;UBERON:0007135!4.22e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.15e-66,8;UBERON:0003296,1.15e-66,8;UBERON:0010133,1.15e-66,8;UBERON:0001894,2.08e-53,10;UBERON:0006222,2.08e-53,10;UBERON:0002780,6.32e-18,39;UBERON:0001890,6.32e-18,39;UBERON:0006240,6.32e-18,39;UBERON:0003080,1.77e-17,40;UBERON:0002616,3.33e-15,46;UBERON:0000955,7.01e-15,47;UBERON:0006238,7.01e-15,47;UBERON:0003056,2.84e-14,49;UBERON:0001049,1.89e-13,52;UBERON:0005068,1.89e-13,52;UBERON:0006241,1.89e-13,52;UBERON:0007135,1.89e-13,52;UBERON:0000073,5.97e-13,54;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002368,5.79e-09,60;UBERON:0002530,2.89e-08,65;UBERON:0010314,1.48e-07,92;UBERON:0000949,1.89e-07,72;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,0,0,0.122490799214954,0.383381884072945,0.919218786610021,0,0.127687338085188,0.153606533256243,0.131886287730194,1.09785172322892,0.52091337055676,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0.910843100738926,0,0.180062129805349,0.60281927134286,0.272145996605311,0.640568601424249,0.468508622798644,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0.639864751605702,0.696710015581316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509235257325564,0.469380496577004,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.36175842301515,1.98067203434441,4.52755393239641,1.07168517515796,1.95074257006501,3.56737635204141,3.1264313914403,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0.299033092087958,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Nnat}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18111 | |||
|HGNC= | |||
|MCL_coexpression_id=1320 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-333bp_to_ENSMUST00000134513_5end | |||
|cluster_id=chr2:157386400..157386411,+ | |||
|description=CAGE_peak_5_at_Nnat_5end | |||
|id=chr2:157386400..157386411,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.65e-10!23;CL:0000337!6.65e-10!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.30e-11!49;UBERON:0000007!5.61e-11!8;UBERON:0003296!5.61e-11!8;UBERON:0010133!5.61e-11!8;UBERON:0000033!7.18e-10!63;UBERON:0004121!2.38e-09!102;UBERON:0000924!2.38e-09!102;UBERON:0006601!2.38e-09!102;UBERON:0002346!2.56e-09!71;UBERON:0003075!2.56e-09!71;UBERON:0007284!2.56e-09!71;UBERON:0002780!6.19e-09!39;UBERON:0001890!6.19e-09!39;UBERON:0006240!6.19e-09!39;UBERON:0003080!1.50e-08!40;UBERON:0001894!2.68e-08!10;UBERON:0006222!2.68e-08!10;UBERON:0002616!8.43e-08!49;UBERON:0000955!1.66e-07!50;UBERON:0006238!1.66e-07!50;UBERON:0001049!4.22e-07!52;UBERON:0005068!4.22e-07!52;UBERON:0006241!4.22e-07!52;UBERON:0007135!4.22e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.15e-66,8;UBERON:0003296,1.15e-66,8;UBERON:0010133,1.15e-66,8;UBERON:0001894,2.08e-53,10;UBERON:0006222,2.08e-53,10;UBERON:0002780,6.32e-18,39;UBERON:0001890,6.32e-18,39;UBERON:0006240,6.32e-18,39;UBERON:0003080,1.77e-17,40;UBERON:0002616,3.33e-15,46;UBERON:0000955,7.01e-15,47;UBERON:0006238,7.01e-15,47;UBERON:0003056,2.84e-14,49;UBERON:0001049,1.89e-13,52;UBERON:0005068,1.89e-13,52;UBERON:0006241,1.89e-13,52;UBERON:0007135,1.89e-13,52;UBERON:0000073,5.97e-13,54;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002368,5.79e-09,60;UBERON:0002530,2.89e-08,65;UBERON:0010314,1.48e-07,92;UBERON:0000949,1.89e-07,72;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,0,0,0.122490799214954,0.383381884072945,0.919218786610021,0,0.127687338085188,0.153606533256243,0.131886287730194,1.09785172322892,0.52091337055676,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0.910843100738926,0,0.180062129805349,0.60281927134286,0.272145996605311,0.640568601424249,0.468508622798644,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0.639864751605702,0.696710015581316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509235257325564,0.469380496577004,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.36175842301515,1.98067203434441,4.52755393239641,1.07168517515796,1.95074257006501,3.56737635204141,3.1264313914403,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0.299033092087958,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Nnat | |||
}} |
Revision as of 09:54, 4 August 2015
Short description: | p5@Nnat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nnat_5end |
Coexpression cluster: | MCL_coexpression_mm9:1320 |
Association with transcript: | -333bp_to_ENSMUST00000134513_5end |
EntrezGene: | 18111 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.15e-66 | 8 |
gland of diencephalon | 1.15e-66 | 8 |
neuroendocrine gland | 1.15e-66 | 8 |
diencephalon | 2.08e-53 | 10 |
future diencephalon | 2.08e-53 | 10 |
regional part of forebrain | 6.32e-18 | 39 |
forebrain | 6.32e-18 | 39 |
future forebrain | 6.32e-18 | 39 |
anterior neural tube | 1.77e-17 | 40 |
regional part of brain | 3.33e-15 | 46 |
brain | 7.01e-15 | 47 |
future brain | 7.01e-15 | 47 |
pre-chordal neural plate | 2.84e-14 | 49 |
neural tube | 1.89e-13 | 52 |
neural rod | 1.89e-13 | 52 |
future spinal cord | 1.89e-13 | 52 |
neural keel | 1.89e-13 | 52 |
regional part of nervous system | 5.97e-13 | 54 |
neurectoderm | 6.42e-11 | 64 |
neural plate | 6.42e-11 | 64 |
presumptive neural plate | 6.42e-11 | 64 |
ecto-epithelium | 1.46e-09 | 73 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
endocrine gland | 5.79e-09 | 60 |
gland | 2.89e-08 | 65 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
endocrine system | 1.89e-07 | 72 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |