FFCP PHASE1:Mm9::chr2:180025418..180025436,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3118|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:180025418..180025436,+|id=chr2:180025418..180025436,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.69e-19!59;UBERON:0000160!6.80e-18!43;UBERON:0004119!9.52e-11!130;UBERON:0000925!9.52e-11!130;UBERON:0006595!9.52e-11!130;UBERON:0001007!1.22e-10!128;UBERON:0001555!1.22e-10!128;UBERON:0007026!1.22e-10!128;UBERON:0004921!8.19e-10!126;UBERON:0004185!8.19e-10!126;UBERON:0002108!6.36e-08!16;UBERON:0005178!4.21e-07!17;UBERON:0005181!4.21e-07!17;UBERON:0002224!4.21e-07!17;UBERON:0000915!4.21e-07!17;UBERON:0008947!4.21e-07!17;UBERON:0003258!4.21e-07!17;UBERON:0001045!4.47e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.35e-24,47;UBERON:0000160,3.71e-19,31;UBERON:0004119,1.14e-13,118;UBERON:0000925,1.14e-13,118;UBERON:0006595,1.14e-13,118;UBERON:0001007,3.13e-13,116;UBERON:0001555,3.13e-13,116;UBERON:0007026,3.13e-13,116;UBERON:0004921,7.30e-12,114;UBERON:0001264,2.95e-10,12;UBERON:0002075,3.44e-07,19|phase1_expression=0.640595388419176,0,0,0,0,1.6787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.43993180514066,1.37645568640302,0.57423196411502,0.430761996159075,1.07735616342945,0.760093677825496,0.504060259519861,0.665191531965914,0,0,0,23.3969811998532,34.7430408799249,21.4377824075488,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,1.12674735821344,0,0,0,0.649473123033642,0.760079596425296,1.01104889002957,0.5709193985953,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0.20778804455956,0.486723789203273,0,0,0,0,0.390361328888111,0.459804208866946,0.180062129805349,0.150704817835715,0,0,0,0,0,0.189106080167819,0.351902248327898,1.09597866213787,1.11218899690239,0.696504333044333,2.05782136407943,0,0,0,0,0.828503090142008,0.703578179943289,0.540186184383045,0.23674473558521,0.590292695242212,0.308534225774757,0,0.268273401399619,0.350296027101508,0,0.32833492815819,0.405344047729279,0.438599962275997,0,0.402619256281115,0,0,0,4.7601101999438,0.213288250535234,1.16118335930219,3.47942145569652,8.67239155880373,7.78323153457046,6.08722003560189,2.84717436926707,2.63518327558417,2.5133520880027,4.17808591286417,3.70431765526328,4.49409704327111,1.29682829924817,1.99141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.442830443938806,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0,0.50925170356284,0,0,0,0,0,0.312037673114561,0,0,0,2.21703828199926,1.89491411770485,0.488894929326078,0.848725428875941,0.704070744865506,0.335012514883631,0.238043640886014,0,1.41871629695572,2.43611158613652,0.637819074629948,2.62181303545181,2.24490476425664,2.02508682014116,0,0,0,0.827810238914197,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,1.32745138339963,1.45668381692989,1.81394134178851,2.82907619633847,2.06711325016541,0.614870295887855,1.03371317267288,2.90826983582004,2.49548164869305,1.26414703174326,1.05418608574999,0,0,1.26042765821917,0.905510786479282,0.214337035031592,0.177340233642274,0,0,0,0,1.0591603543191,0.220528398054962,0,0.968786560175433,0.72375509913787,0.596861720015682,0.492422699235184,2.91480836629851,0,0,0,0,0,0,0,0,0,0,9.54670618015114,0.158167996790568,2.84647253977588,7.12835249423888,5.85447228840512,6.55087691238533,7.41753905116514,5.53778153359751,5.23511883968059,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0.443971906748129,0,0.671538465456314,4.25017106870819,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0,0.512200817262403,0.486213434136588,1.04806581313991,0.919217542250071,0.222246727801615,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.280924522409647,0.320125762024346,0.459483751644906,0,0.579421629724277,0.38581844092741,0.824171801606613,0.588795680537589,0.342869252385415,0.177475806159338,0.953744759789284,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,1.05227884575137,0.407412341537585,0,0.355905054372522,0.29551344712669,0,0,0.771626443924566,0,1.87145286756327,0,0.191288332068843,0,0|short_description=p@chr2:180025418..180025436,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3118 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:180025418..180025436,+ | |||
|description=CAGE_peak_at_chr2:180025418..180025436,+ | |||
|id=chr2:180025418..180025436,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.69e-19!59;UBERON:0000160!6.80e-18!43;UBERON:0004119!9.52e-11!130;UBERON:0000925!9.52e-11!130;UBERON:0006595!9.52e-11!130;UBERON:0001007!1.22e-10!128;UBERON:0001555!1.22e-10!128;UBERON:0007026!1.22e-10!128;UBERON:0004921!8.19e-10!126;UBERON:0004185!8.19e-10!126;UBERON:0002108!6.36e-08!16;UBERON:0005178!4.21e-07!17;UBERON:0005181!4.21e-07!17;UBERON:0002224!4.21e-07!17;UBERON:0000915!4.21e-07!17;UBERON:0008947!4.21e-07!17;UBERON:0003258!4.21e-07!17;UBERON:0001045!4.47e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.35e-24,47;UBERON:0000160,3.71e-19,31;UBERON:0004119,1.14e-13,118;UBERON:0000925,1.14e-13,118;UBERON:0006595,1.14e-13,118;UBERON:0001007,3.13e-13,116;UBERON:0001555,3.13e-13,116;UBERON:0007026,3.13e-13,116;UBERON:0004921,7.30e-12,114;UBERON:0001264,2.95e-10,12;UBERON:0002075,3.44e-07,19 | |||
|phase1_expression=0.640595388419176,0,0,0,0,1.6787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.43993180514066,1.37645568640302,0.57423196411502,0.430761996159075,1.07735616342945,0.760093677825496,0.504060259519861,0.665191531965914,0,0,0,23.3969811998532,34.7430408799249,21.4377824075488,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,1.12674735821344,0,0,0,0.649473123033642,0.760079596425296,1.01104889002957,0.5709193985953,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0.20778804455956,0.486723789203273,0,0,0,0,0.390361328888111,0.459804208866946,0.180062129805349,0.150704817835715,0,0,0,0,0,0.189106080167819,0.351902248327898,1.09597866213787,1.11218899690239,0.696504333044333,2.05782136407943,0,0,0,0,0.828503090142008,0.703578179943289,0.540186184383045,0.23674473558521,0.590292695242212,0.308534225774757,0,0.268273401399619,0.350296027101508,0,0.32833492815819,0.405344047729279,0.438599962275997,0,0.402619256281115,0,0,0,4.7601101999438,0.213288250535234,1.16118335930219,3.47942145569652,8.67239155880373,7.78323153457046,6.08722003560189,2.84717436926707,2.63518327558417,2.5133520880027,4.17808591286417,3.70431765526328,4.49409704327111,1.29682829924817,1.99141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.442830443938806,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0,0.50925170356284,0,0,0,0,0,0.312037673114561,0,0,0,2.21703828199926,1.89491411770485,0.488894929326078,0.848725428875941,0.704070744865506,0.335012514883631,0.238043640886014,0,1.41871629695572,2.43611158613652,0.637819074629948,2.62181303545181,2.24490476425664,2.02508682014116,0,0,0,0.827810238914197,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,1.32745138339963,1.45668381692989,1.81394134178851,2.82907619633847,2.06711325016541,0.614870295887855,1.03371317267288,2.90826983582004,2.49548164869305,1.26414703174326,1.05418608574999,0,0,1.26042765821917,0.905510786479282,0.214337035031592,0.177340233642274,0,0,0,0,1.0591603543191,0.220528398054962,0,0.968786560175433,0.72375509913787,0.596861720015682,0.492422699235184,2.91480836629851,0,0,0,0,0,0,0,0,0,0,9.54670618015114,0.158167996790568,2.84647253977588,7.12835249423888,5.85447228840512,6.55087691238533,7.41753905116514,5.53778153359751,5.23511883968059,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0.443971906748129,0,0.671538465456314,4.25017106870819,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0,0.512200817262403,0.486213434136588,1.04806581313991,0.919217542250071,0.222246727801615,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.280924522409647,0.320125762024346,0.459483751644906,0,0.579421629724277,0.38581844092741,0.824171801606613,0.588795680537589,0.342869252385415,0.177475806159338,0.953744759789284,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,1.05227884575137,0.407412341537585,0,0.355905054372522,0.29551344712669,0,0,0.771626443924566,0,1.87145286756327,0,0.191288332068843,0,0 | |||
|short_description=p@chr2:180025418..180025436,+ | |||
}} |
Latest revision as of 17:20, 4 August 2015
Short description: | p@chr2:180025418..180025436, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:180025418..180025436, + |
Coexpression cluster: | MCL_coexpression_mm9:3118 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.35e-24 | 47 |
intestine | 3.71e-19 | 31 |
endoderm-derived structure | 1.14e-13 | 118 |
endoderm | 1.14e-13 | 118 |
presumptive endoderm | 1.14e-13 | 118 |
digestive system | 3.13e-13 | 116 |
digestive tract | 3.13e-13 | 116 |
primitive gut | 3.13e-13 | 116 |
subdivision of digestive tract | 7.30e-12 | 114 |
pancreas | 2.95e-10 | 12 |
viscus | 3.44e-07 | 19 |