FFCP PHASE1:Hg19::chr7:150549595..150549614,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=80 | |||
|TSSclassifier=weak | |||
|UniProt=C9J690,E7ER24,C9J2J4 | |||
|association_with_transcript=0bp_to_ENST00000416793,ENST00000437714,ENST00000483043_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_ABP1_5end | |||
|id=chr7:150549595..150549614,+ | |||
|ontology_enrichment_celltype=CL:0000990!8.38e-09!8;CL:0000453!8.86e-08!5;CL:0000451!7.99e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.19e-12;5!CL:0000990;3.60e-09;8!CL:0002541;9.29e-09;3!CL:0000451;2.42e-07;10!CL:0002178;6.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.12e-12,5;CL:0000990,3.53e-09,8;CL:0002541,9.30e-09,3;CL:0000451,2.38e-07,10;CL:0002178,6.09e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;4.19e-09;14!DOID:299;2.14e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.05e-09,14;DOID:299,1.90e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0005409!5.98e-11!35;UBERON:0002390!2.12e-08!102;UBERON:0003061!2.12e-08!102;UBERON:0002193!6.46e-08!112;UBERON:0000160!8.99e-08!27;UBERON:0004921!7.17e-07!129;UBERON:0004185!7.17e-07!129;UBERON:0004119!8.66e-07!169;UBERON:0000925!8.66e-07!169;UBERON:0006595!8.66e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.21e-22;22!UBERON:0000160;3.90e-17;17!UBERON:0004921;5.58e-16;33!UBERON:0000059;5.59e-10;11!UBERON:0003124;9.29e-09;3!UBERON:0000920;9.29e-09;3!UBERON:0002108;2.56e-08;4!UBERON:0004907;8.71e-08;5!UBERON:0000945;3.90e-07;5!UBERON:0010039;3.90e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.58e-19,25;UBERON:0000160,3.80e-17,17;UBERON:0000059,5.44e-10,11;UBERON:0000920,9.30e-09,3;UBERON:0002108,2.54e-08,4;UBERON:0004907,8.41e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,3.56077083626975,0,0,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,0,0,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0,0.689491361473237,0,0,0.376484679085209,0,0.224723484445085,0.612167784741805,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,1.08594422352558,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01207876807801,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,130.979075497713,0,0.741568885568859,0.97364218096405,1.39303789839414,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.310288376215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,2.57404691653161,1.33768046059855,0,0,0,0,0,0,0,0,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.0125358039787,0.200506470303285,0.184161977871793,0,0,0,0.451199612907412,0.924184045252977,0,0,0,0,0,0,0,0,0,1.52925763827023,4.15538004464362,0,0,0,0,0,0,102.834929624427,0,0,0,0,0,0,0,0,0,0,0,0,1.24644849905432,0,0,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.570782479314,0.86101074534246,0,0.443430153536676,0,0.507447609232169,1.52927441428475,1.70894156152249,0.714695326373367,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.313359791546046,0,0,0,0.201799707191048,14.9046183191614,0,3.07240764308458,2.23676107892416,3.50383197595008,2.14926904942244,0,0,0,0,0,28.8196432228658,0,0,0,0,408.491813386188,7.7210817016486,0.307160702099232,0,0,0,0,0,0.398495976502139,35.3643411879869,3.52705846995986,0,0.738508832766417,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,4.3221360726367,1.00035336054936,0.227884111694002,0,0.0897576444097721,4.45454224880233,2294.89434311143,1452.55463616673,3605.44722499005,0,0,0,0,0,0,0,0,0,0,4.38194521445217,0,104.502502763243,341.534656547393,121.594998841791,0,0,0,0.202203398942031,0,0,0,2.34797542718508,0,5.52418163989147,110.101551604284,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,25.7720005199813,0,20.2682935160755,0,0,0,0,1.93978032976839,0,0,0,0,0,13.1019426432318,0.0801588202515337,21.772205463414,5.19504984913539,1.72908500584927,0,6.00582492516876,0,0,0.707082103850386,0,0,0.203996435272644,0,0,0,0,0,0,0.558564802544508,1.60412296808179,0,0.399358000997982,0,0.446342914883745,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0,0,0.160753148465019,0,0,40.9452482623731,4.6428117273477,0,1.0063040627978,173.687778887433,63.9945975246977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52407511158336,0.213574825135389,0,1.24271716604159,2.48083010905975,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,1137.98420362203,1734.9490848119,1448.20800074124,0,0,0,0,0,6.19973926778936,0,0,0.139879507719444,14.3077769807584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,2.34454203369928,0,0,14.7856086217045,0,0,0,0,0,0.548257766857182,3.47347824872506,0,0.255524855279191,0,0,0,0,1062.47698980809,0,0,0,0,0,0,1.64835494986079,0,6.44625975621715,46.5710947459843,6.26190014534002,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,1.8328549483524,0,0,153.241941562975,2.15930513953535,5.60822454918439,0,0,0,1.94284397223656,43.0448612770274,0,0,2.2589216407792,0.219881033490858,25.8146462499012,507.497263717844,239.759837872841,1555.80961636392,0,0.235676547101626,0,0,1.6906229103336,0,0,0.322289439867886,0.199882311849858,0.178553938605658,0,0,11.6853822119443,0.917458566809082,0,0,0,0,103.689260741018,0,0,0,0,0,0,0,0,0.0918948995348449,0,2.5006970412019,0,0,0,0.426467963801962,0.23806443146374,2.38978966393223,1.92431614317159,0,0,0.202117188958219,0,0.684466602170562,4.37788344594819,0.502055437748735,0.99798106963804,0,0,0,3.86248369058324,0,0.122241444182866,0.813792356631477,0,1.20764276154616,0 | |||
|short_description=p1@ABP1 | |||
}} |
Revision as of 20:04, 22 January 2014
Short description: | p1@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000416793, ENST00000437714, ENST00000483043_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | C9J690E7ER24C9J2J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.12e-12 | 5 |
conventional dendritic cell | 3.53e-09 | 8 |
chorionic membrane mesenchymal stem cell | 9.30e-09 | 3 |
dendritic cell | 2.38e-07 | 10 |
epithelial cell of stomach | 6.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.58e-19 | 25 |
intestine | 3.80e-17 | 17 |
large intestine | 5.44e-10 | 11 |
egg chorion | 9.30e-09 | 3 |
small intestine | 2.54e-08 | 4 |
lower digestive tract | 8.41e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.05e-09 | 14 |
adenocarcinoma | 1.90e-08 | 25 |