FFCP PHASE1:Mm9::chr2:4480691..4480702,+: Difference between revisions
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{{FFCP|EntrezGene=209630|HGNC=|MCL_coexpression_id=114|UniProt=Q3TB04|association_with_transcript=-97bp_to_ENSMUST00000153160,NM_001177844,uc008iet.2,uc008ieu.2,uc008iev.2_5end|description=CAGE_peak_17_at_Frmd4a_5end|id=chr2:4480691..4480702,+|ontology_enrichment_celltype=CL:0000107!8.23e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,5.79e-21,9;CL:0000540,1.13e-07,33;CL:0000047,1.13e-07,33;CL:0000031,1.13e-07,33;CL:0000404,1.13e-07,33;CL:0002319,1.39e-07,43;CL:0000221,2.44e-07,44;CL:0000133,2.44e-07,44;CL:0000393,3.23e-07,39;CL:0000211,3.23e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!3.25e-09!11;UBERON:0002410!8.23e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.52e-25,11;UBERON:0002410,5.79e-21,9;UBERON:0000013,2.52e-08,3;UBERON:0010313,3.12e-08,3;UBERON:0002342,3.12e-08,3;UBERON:0002005,3.12e-08,3;UBERON:0005428,3.12e-08,3;UBERON:0005062,3.12e-08,3;UBERON:0000011,1.33e-07,3|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0.0874204024189974,1.66554880907831,1.01237633694913,2.09868563438444,0,0,0,0.0850432901510698,0.297872853602656,0.522399578277871,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,0,0.872100625521786,0.659058548203415,0.777719596297134,0.419959264876088,0,0.167782606057736,0,0.336093799142464,1.54355661621568,0.286533439938757,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,1.34796496001021,1.4850653216486,0.420649922702764,0,0,0.734944795289724,0.383381884072945,0,0,0,0,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0.186399445825301,6.36100023998746,4.53429360640713,0.579728977403356,0,1.3599426674155,0,0,0,0,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,0.60289056221049,0.587943535678524,0,0,0,0.884610551949874,0.161766849947409,0.883366073841574,1.45462575940567,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0.254140454146129,0.299581278809645,0,0.125654352112864,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0.459804208866946,1.44049703844279,2.10986744970001,2.10913147369116,3.07472928683639,1.49922759295566,0.258703370739016,1.72454394346274,0.945530400839096,0.879755620819744,0,0,0,0.411564272815887,0,0,0,0.284163499395593,0.621377317606506,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.658239399653922,0.164167464079095,0.0810688095458557,0.438599962275997,0,0.268412837520744,0,0.102904612379284,0,0,0.853153002140936,0.696710015581316,0.644337306610467,0.605050573870028,0.22237804384487,0,0,0,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0.398282546508734,0.948339504765408,0.685491075658373,3.38123207019241,1.22190796707189,0.581857461502877,0.280543279561274,0.632365371242573,0.590440591918409,0.156998727841375,0.616985819609003,0,0.667380422864376,0.982794975566015,0.449724224769707,0.405720242777006,0.964708639009667,0.763877555344259,1.15078454980324,2.59416362840057,0.274561413188081,1.43768206527355,1.48856379067401,0.312037673114561,0.505157755894224,0,0,0.739012760666419,0.37898282354097,0,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,1.32878813789265,0.478364305972461,0.491589944147214,0.863424909329478,0,0,1.08781136763742,0,0.275936746304732,0,0,0,0.252470927204373,6.31016438832513,8.98009111882268,12.7099804662351,3.34556317133573,3.56477878531831,1.69845918473299,12.1443210502468,9.05993159525067,9.09161889277004,0,0,0.178065603667255,0.651547837414304,0.329940245945071,0,0.485561272309963,0.604647113929502,0,0,0,0.775284879504663,0,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0.857348140126369,0.354680467284547,0,0.164549020602121,0.608929898229199,0.469343416127421,0.21183207086382,0,0.65954501176592,0.484393280087717,1.08563264870681,0.954978752025092,0.656563598980245,0,0,1.53783792718067,0.206386867963223,0.555583582109135,0.565105371014073,0.27338845544205,0.457556346413045,0,0.279902904647316,0,0.954670618015114,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.516639293910924,0.337912250981556,0.938857909166032,0.2604087696879,0.104859344425711,0,0,0.948033361884535,2.63542779877213,2.15693010046137,1.16928740680016,1.07416017400489,0.39736270956253,0.240390899039938,0.295379054349154,0.201932899896295,0.609654453239999,0.100826185136841,0.194915761479505,0.0962118416403295,0.350630706544707,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.93841237725591,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,1.19707462020309,0.682934423016537,0,0.209613162627982,0.367687016900028,0,0.618105171716683,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.128050304809739,0.287177344778066,0,0.579421629724277,0.192909220463705,0,1.03039244094078,0.342869252385415,0.177475806159338,0,0.581385666529314,0.658765662907314,0.507687647350059,0.365855945745545,0,0.814824683075171,0,0.474540072496697,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p17@Frmd4a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:209630 | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TB04 | |||
|association_with_transcript=-97bp_to_ENSMUST00000153160,NM_001177844,uc008iet.2,uc008ieu.2,uc008iev.2_5end | |||
|cluster_id=chr2:4480691..4480702,+ | |||
|description=CAGE_peak_17_at_Frmd4a_5end | |||
|id=chr2:4480691..4480702,+ | |||
|ontology_enrichment_celltype=CL:0000107!8.23e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.79e-21,9;CL:0000540,1.13e-07,33;CL:0000047,1.13e-07,33;CL:0000031,1.13e-07,33;CL:0000404,1.13e-07,33;CL:0002319,1.39e-07,43;CL:0000221,2.44e-07,44;CL:0000133,2.44e-07,44;CL:0000393,3.23e-07,39;CL:0000211,3.23e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!3.25e-09!11;UBERON:0002410!8.23e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.52e-25,11;UBERON:0002410,5.79e-21,9;UBERON:0000013,2.52e-08,3;UBERON:0010313,3.12e-08,3;UBERON:0002342,3.12e-08,3;UBERON:0002005,3.12e-08,3;UBERON:0005428,3.12e-08,3;UBERON:0005062,3.12e-08,3;UBERON:0000011,1.33e-07,3 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0.0874204024189974,1.66554880907831,1.01237633694913,2.09868563438444,0,0,0,0.0850432901510698,0.297872853602656,0.522399578277871,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,0,0.872100625521786,0.659058548203415,0.777719596297134,0.419959264876088,0,0.167782606057736,0,0.336093799142464,1.54355661621568,0.286533439938757,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,1.34796496001021,1.4850653216486,0.420649922702764,0,0,0.734944795289724,0.383381884072945,0,0,0,0,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0.186399445825301,6.36100023998746,4.53429360640713,0.579728977403356,0,1.3599426674155,0,0,0,0,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,0.60289056221049,0.587943535678524,0,0,0,0.884610551949874,0.161766849947409,0.883366073841574,1.45462575940567,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0.254140454146129,0.299581278809645,0,0.125654352112864,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0.459804208866946,1.44049703844279,2.10986744970001,2.10913147369116,3.07472928683639,1.49922759295566,0.258703370739016,1.72454394346274,0.945530400839096,0.879755620819744,0,0,0,0.411564272815887,0,0,0,0.284163499395593,0.621377317606506,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.658239399653922,0.164167464079095,0.0810688095458557,0.438599962275997,0,0.268412837520744,0,0.102904612379284,0,0,0.853153002140936,0.696710015581316,0.644337306610467,0.605050573870028,0.22237804384487,0,0,0,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0.398282546508734,0.948339504765408,0.685491075658373,3.38123207019241,1.22190796707189,0.581857461502877,0.280543279561274,0.632365371242573,0.590440591918409,0.156998727841375,0.616985819609003,0,0.667380422864376,0.982794975566015,0.449724224769707,0.405720242777006,0.964708639009667,0.763877555344259,1.15078454980324,2.59416362840057,0.274561413188081,1.43768206527355,1.48856379067401,0.312037673114561,0.505157755894224,0,0,0.739012760666419,0.37898282354097,0,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,1.32878813789265,0.478364305972461,0.491589944147214,0.863424909329478,0,0,1.08781136763742,0,0.275936746304732,0,0,0,0.252470927204373,6.31016438832513,8.98009111882268,12.7099804662351,3.34556317133573,3.56477878531831,1.69845918473299,12.1443210502468,9.05993159525067,9.09161889277004,0,0,0.178065603667255,0.651547837414304,0.329940245945071,0,0.485561272309963,0.604647113929502,0,0,0,0.775284879504663,0,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0.857348140126369,0.354680467284547,0,0.164549020602121,0.608929898229199,0.469343416127421,0.21183207086382,0,0.65954501176592,0.484393280087717,1.08563264870681,0.954978752025092,0.656563598980245,0,0,1.53783792718067,0.206386867963223,0.555583582109135,0.565105371014073,0.27338845544205,0.457556346413045,0,0.279902904647316,0,0.954670618015114,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.516639293910924,0.337912250981556,0.938857909166032,0.2604087696879,0.104859344425711,0,0,0.948033361884535,2.63542779877213,2.15693010046137,1.16928740680016,1.07416017400489,0.39736270956253,0.240390899039938,0.295379054349154,0.201932899896295,0.609654453239999,0.100826185136841,0.194915761479505,0.0962118416403295,0.350630706544707,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.93841237725591,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,1.19707462020309,0.682934423016537,0,0.209613162627982,0.367687016900028,0,0.618105171716683,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.128050304809739,0.287177344778066,0,0.579421629724277,0.192909220463705,0,1.03039244094078,0.342869252385415,0.177475806159338,0,0.581385666529314,0.658765662907314,0.507687647350059,0.365855945745545,0,0.814824683075171,0,0.474540072496697,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p17@Frmd4a | |||
}} |
Revision as of 04:35, 5 August 2015
Short description: | p17@Frmd4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Frmd4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | -97bp_to_ENSMUST00000153160, NM_001177844, uc008iet.2, uc008ieu.2, uc008iev.2_5end |
EntrezGene: | 209630 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.79e-21 | 9 |
neuron | 1.13e-07 | 33 |
neuronal stem cell | 1.13e-07 | 33 |
neuroblast | 1.13e-07 | 33 |
electrically signaling cell | 1.13e-07 | 33 |
neural cell | 1.39e-07 | 43 |
ectodermal cell | 2.44e-07 | 44 |
neurectodermal cell | 2.44e-07 | 44 |
electrically responsive cell | 3.23e-07 | 39 |
electrically active cell | 3.23e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.52e-25 | 11 |
autonomic nervous system | 5.79e-21 | 9 |
sympathetic nervous system | 2.52e-08 | 3 |
neural crest-derived structure | 3.12e-08 | 3 |
neural crest | 3.12e-08 | 3 |
enteric nervous system | 3.12e-08 | 3 |
vagal neural crest | 3.12e-08 | 3 |
neural fold | 3.12e-08 | 3 |
parasympathetic nervous system | 1.33e-07 | 3 |