FFCP PHASE1:Mm9::chr2:4480747..4480752,+: Difference between revisions
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{{FFCP|EntrezGene=209630|HGNC=|MCL_coexpression_id=114|UniProt=Q3TB04|association_with_transcript=-47bp_to_ENSMUST00000153160,NM_001177844,uc008iet.2,uc008ieu.2,uc008iev.2_5end|description=CAGE_peak_41_at_Frmd4a_5end|id=chr2:4480747..4480752,+|ontology_enrichment_celltype=CL:0000107!1.68e-09!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.49e-43,9;CL:0000217,5.72e-17,2;CL:0000328,5.72e-17,2;CL:0002573,5.72e-17,2;CL:0002376,5.72e-17,2;CL:0000218,5.72e-17,2;CL:0000692,5.72e-17,2;CL:0002377,5.72e-17,2;CL:0002375,5.72e-17,2;CL:0002319,1.43e-14,43;CL:0000221,3.15e-14,44;CL:0000133,3.15e-14,44;CL:0000215,1.21e-11,3;CL:0000540,1.23e-11,33;CL:0000047,1.23e-11,33;CL:0000031,1.23e-11,33;CL:0000404,1.23e-11,33;CL:0000393,8.69e-10,39;CL:0000211,8.69e-10,39;CL:0002321,1.07e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!2.47e-11!11;UBERON:0002410!1.68e-09!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.74e-58,11;UBERON:0002410,2.49e-43,9;UBERON:0000013,1.76e-25,3;UBERON:0010313,1.55e-11,3;UBERON:0002342,1.55e-11,3;UBERON:0002005,1.55e-11,3;UBERON:0005428,1.55e-11,3;UBERON:0005062,1.55e-11,3;UBERON:0000011,1.97e-11,3;UBERON:0001016,4.55e-08,75|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0.666219523631325,0.404950534779652,0,0,0.137114433605739,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0.372798891650601,2.87759534666099,1.13357340160178,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0.360124259610698,0,0.612328492361951,0.2562274405697,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0.350296027101508,0,0,0,0,0,0.134206418760372,0,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0.203651327845314,0.387904974335251,0.210407459670956,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0.433947175744535,1.50791283939272,0.54390568381871,0,0.275936746304732,0,0,0,0,1.26203287766503,0.390438744296638,1.72338718186239,0.955875191810208,1.11399337041197,2.54768877709949,3.64329631507405,2.63030272120181,3.16230222357219,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0.645857706783622,0.301564624640779,0.119372344003136,0.328281799490123,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0.316335993581135,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0.506868376472335,0.234714477291508,0,0,0,0,0,0.405450430580328,0.513554785824136,0.909445760844565,0.179026695667481,0.39736270956253,0.120195449519969,0.443068581523732,0.201932899896295,0.15241361331,0.100826185136841,0.194915761479505,0,0.116876902181569,0,0.221985953374065,0,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p41@Frmd4a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:209630 | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TB04 | |||
|association_with_transcript=-47bp_to_ENSMUST00000153160,NM_001177844,uc008iet.2,uc008ieu.2,uc008iev.2_5end | |||
|cluster_id=chr2:4480747..4480752,+ | |||
|description=CAGE_peak_41_at_Frmd4a_5end | |||
|id=chr2:4480747..4480752,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.68e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.49e-43,9;CL:0000217,5.72e-17,2;CL:0000328,5.72e-17,2;CL:0002573,5.72e-17,2;CL:0002376,5.72e-17,2;CL:0000218,5.72e-17,2;CL:0000692,5.72e-17,2;CL:0002377,5.72e-17,2;CL:0002375,5.72e-17,2;CL:0002319,1.43e-14,43;CL:0000221,3.15e-14,44;CL:0000133,3.15e-14,44;CL:0000215,1.21e-11,3;CL:0000540,1.23e-11,33;CL:0000047,1.23e-11,33;CL:0000031,1.23e-11,33;CL:0000404,1.23e-11,33;CL:0000393,8.69e-10,39;CL:0000211,8.69e-10,39;CL:0002321,1.07e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.47e-11!11;UBERON:0002410!1.68e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.74e-58,11;UBERON:0002410,2.49e-43,9;UBERON:0000013,1.76e-25,3;UBERON:0010313,1.55e-11,3;UBERON:0002342,1.55e-11,3;UBERON:0002005,1.55e-11,3;UBERON:0005428,1.55e-11,3;UBERON:0005062,1.55e-11,3;UBERON:0000011,1.97e-11,3;UBERON:0001016,4.55e-08,75 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0.666219523631325,0.404950534779652,0,0,0.137114433605739,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0.372798891650601,2.87759534666099,1.13357340160178,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0.360124259610698,0,0.612328492361951,0.2562274405697,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0.350296027101508,0,0,0,0,0,0.134206418760372,0,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0.203651327845314,0.387904974335251,0.210407459670956,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0.433947175744535,1.50791283939272,0.54390568381871,0,0.275936746304732,0,0,0,0,1.26203287766503,0.390438744296638,1.72338718186239,0.955875191810208,1.11399337041197,2.54768877709949,3.64329631507405,2.63030272120181,3.16230222357219,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0.645857706783622,0.301564624640779,0.119372344003136,0.328281799490123,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0.316335993581135,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0.506868376472335,0.234714477291508,0,0,0,0,0,0.405450430580328,0.513554785824136,0.909445760844565,0.179026695667481,0.39736270956253,0.120195449519969,0.443068581523732,0.201932899896295,0.15241361331,0.100826185136841,0.194915761479505,0,0.116876902181569,0,0.221985953374065,0,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p41@Frmd4a | |||
}} |
Revision as of 04:36, 5 August 2015
Short description: | p41@Frmd4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_41_at_Frmd4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | -47bp_to_ENSMUST00000153160, NM_001177844, uc008iet.2, uc008ieu.2, uc008iev.2_5end |
EntrezGene: | 209630 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.49e-43 | 9 |
insulating cell | 5.72e-17 | 2 |
myelin accumulating cell | 5.72e-17 | 2 |
Schwann cell | 5.72e-17 | 2 |
non-myelinating Schwann cell | 5.72e-17 | 2 |
myelinating Schwann cell;;Schwann cell | 5.72e-17 | 2 |
terminal Schwann cell | 5.72e-17 | 2 |
immature Schwann cell | 5.72e-17 | 2 |
Schwann cell precursor | 5.72e-17 | 2 |
neural cell | 1.43e-14 | 43 |
ectodermal cell | 3.15e-14 | 44 |
neurectodermal cell | 3.15e-14 | 44 |
barrier cell | 1.21e-11 | 3 |
neuron | 1.23e-11 | 33 |
neuronal stem cell | 1.23e-11 | 33 |
neuroblast | 1.23e-11 | 33 |
electrically signaling cell | 1.23e-11 | 33 |
electrically responsive cell | 8.69e-10 | 39 |
electrically active cell | 8.69e-10 | 39 |
embryonic cell | 1.07e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.74e-58 | 11 |
autonomic nervous system | 2.49e-43 | 9 |
sympathetic nervous system | 1.76e-25 | 3 |
neural crest-derived structure | 1.55e-11 | 3 |
neural crest | 1.55e-11 | 3 |
enteric nervous system | 1.55e-11 | 3 |
vagal neural crest | 1.55e-11 | 3 |
neural fold | 1.55e-11 | 3 |
parasympathetic nervous system | 1.97e-11 | 3 |
nervous system | 4.55e-08 | 75 |