FFCP PHASE1:Mm9::chr2:78709455..78709478,+: Difference between revisions
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{{FFCP|EntrezGene=22193|HGNC=|UniProt=|association_with_transcript=-12bp_to_ENSMUST00000138864_5end|description=CAGE_peak_5_at_Ube2e3_5end|id=chr2:78709455..78709478,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!8.25e-10!71;UBERON:0003075!8.25e-10!71;UBERON:0007284!8.25e-10!71;UBERON:0004121!8.44e-09!102;UBERON:0000924!8.44e-09!102;UBERON:0006601!8.44e-09!102;UBERON:0000033!2.77e-08!63;UBERON:0001017!4.92e-08!73;UBERON:0005743!4.92e-08!73;UBERON:0003056!1.88e-07!49;UBERON:0000073!2.31e-07!75;UBERON:0001016!2.31e-07!75;UBERON:0000468!2.61e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.98e-10,64;UBERON:0003075,4.98e-10,64;UBERON:0007284,4.98e-10,64;UBERON:0010371,1.08e-09,73;UBERON:0004121,9.41e-09,95;UBERON:0000924,9.41e-09,95;UBERON:0006601,9.41e-09,95;UBERON:0001017,5.16e-08,73;UBERON:0010314,6.39e-08,92;UBERON:0003056,1.93e-07,49;UBERON:0001016,2.42e-07,75|phase1_expression=6.08565618998217,0.697950815278722,0.454999239389536,0.60492842261366,1.50268718983904,0.839396359559449,1.86890112476421,0.129123323441576,1.267098499365,0.70219357896598,0,0,0,0,0.999329285446988,2.42970320867791,1.39912375625629,0.157731082679119,0.274228867211478,0.84877930359606,1.87095238332354,0.496454756004426,0.522399578277871,0.95995453676044,0.91763712426868,0.57423196411502,1.7230479846363,0.430942465371778,0.760093677825496,0.756090389279792,0.443461021310609,1.90509202037889,1.23012957516914,0,3.46621943701529,1.49611180822643,3.26670970019791,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,0,0.485510353031154,2.14024590558481,2.02753862439029,0.917733760808408,2.34717403304412,1.96222640742402,0.659058548203415,1.94429899074283,1.81982348112971,2.87505128729943,0,0.725362142011344,0,2.05807548828758,1.43266719969378,1.03134418455488,5.05791152148994,1.5869729378161,5.07065122804943,1.69422266034566,0,0.449949858640699,1.97773272513395,0.7104801149461,0.599200221036809,1.15265491596466,3.11068836925433,4.45519596494579,3.99617426567626,3.42781181284564,2.42955395046775,5.26710436624302,4.79227355091182,8.27296907949019,2.20231761998777,3.31987079021488,1.22885226604995,5.80299666012853,6.67859798297591,2.6045668527838,2.51264699101243,2.25105044012672,2.13917546887534,3.24091444021034,4.41352210477219,5.40558392893372,1.59025005999687,1.73814588245607,3.76823835312181,0.860423876981386,3.39985666853875,1.07940638327563,0,2.68816132258401,2.38755514223978,1.70430322578058,1.81850203222008,1.7666978725517,6.05626705039726,5.13305909657271,0,21.3320010945999,1.94841936910093,1.77351905832569,1.51657333504435,5.59501010623394,1.03575153458869,2.3750742250372,4.3371331691534,3.34912026143355,2.7673859670727,2.56228488939458,5.05631440683531,1.25666591329675,1.97755974187499,1.44599356919912,4.42305275974937,2.10296904931632,1.10420759230197,2.42437626567611,5.59175283654366,6.44117753425404,25.3430515244281,3.32094171771169,3.23500836165985,4.79922184794726,1.90605340609597,2.24685959107234,4.11750542536764,7.79056983099759,4.17178368461463,5.8814555185976,3.32460871295296,4.05603157669394,4.27725328171328,1.8661045591514,2.0217820674694,2.31486041475121,7.41686524887411,4.82794419310293,3.96136685571768,4.67184935290717,7.89223390155403,6.40568601424249,5.05989312622536,5.17406741478031,6.25147179505242,5.67318240503458,6.33424046990216,4.82230611340665,4.17070873838397,4.179025998266,3.2925141825271,4.17971960318836,3.51106593656617,2.05878325691772,2.27330799516474,2.27838349789052,3.04883877975425,2.52086886045421,3.07768156260773,3.93528463494808,4.01094493507183,0.465067889500816,3.21928081679543,3.50296027101508,2.63295759861569,3.11918181750281,2.91847714365081,1.60819986167866,1.75640092232841,2.01309628140558,3.78521907415429,8.95270127699774,0.330418782983798,1.85115396664481,5.54549451391608,3.94802342162745,2.83508414908605,0.80673409849337,2.00140239460383,0.570676878337677,7.11793592316767,1.97638745668813,5.52937459360593,1.39269530428806,3.11942539390592,8.08937467788799,4.75503709724327,1.7922714592893,4.93136542478012,4.34144347916969,1.1270773567308,4.48032921259691,3.49114476901726,6.0316805105674,3.03535378196435,1.91893192373483,1.8839847340965,2.71473760627961,0.889357881261447,2.00214126859313,3.34150291692445,3.37293168577281,2.23146133527353,2.41177159752417,2.5462585178142,2.30156909960649,16.5377931310536,3.0201755450689,1.43768206527355,5.20997326735905,4.05648975048929,1.26289438973556,2.15276896226295,5.30687873499704,4.0645701836653,5.11626811780309,3.58522948172457,3.73439188705414,4.22442446919304,3.85264392116176,3.33261097240419,4.68320754858717,6.46304090835383,7.30833475840957,3.02964060449226,2.62181303545181,3.10832967358612,3.90552458170081,1.50791283939272,1.63171705145613,2.45882136509518,2.75936746304733,3.85321415970701,3.5163505977661,3.11476396215683,1.51482556322624,4.41711507182759,5.85658116444958,6.03185513651837,4.0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22193 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENSMUST00000138864_5end | |||
|cluster_id=chr2:78709455..78709478,+ | |||
|description=CAGE_peak_5_at_Ube2e3_5end | |||
|id=chr2:78709455..78709478,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.25e-10!71;UBERON:0003075!8.25e-10!71;UBERON:0007284!8.25e-10!71;UBERON:0004121!8.44e-09!102;UBERON:0000924!8.44e-09!102;UBERON:0006601!8.44e-09!102;UBERON:0000033!2.77e-08!63;UBERON:0001017!4.92e-08!73;UBERON:0005743!4.92e-08!73;UBERON:0003056!1.88e-07!49;UBERON:0000073!2.31e-07!75;UBERON:0001016!2.31e-07!75;UBERON:0000468!2.61e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.98e-10,64;UBERON:0003075,4.98e-10,64;UBERON:0007284,4.98e-10,64;UBERON:0010371,1.08e-09,73;UBERON:0004121,9.41e-09,95;UBERON:0000924,9.41e-09,95;UBERON:0006601,9.41e-09,95;UBERON:0001017,5.16e-08,73;UBERON:0010314,6.39e-08,92;UBERON:0003056,1.93e-07,49;UBERON:0001016,2.42e-07,75 | |||
|phase1_expression=6.08565618998217,0.697950815278722,0.454999239389536,0.60492842261366,1.50268718983904,0.839396359559449,1.86890112476421,0.129123323441576,1.267098499365,0.70219357896598,0,0,0,0,0.999329285446988,2.42970320867791,1.39912375625629,0.157731082679119,0.274228867211478,0.84877930359606,1.87095238332354,0.496454756004426,0.522399578277871,0.95995453676044,0.91763712426868,0.57423196411502,1.7230479846363,0.430942465371778,0.760093677825496,0.756090389279792,0.443461021310609,1.90509202037889,1.23012957516914,0,3.46621943701529,1.49611180822643,3.26670970019791,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,0,0.485510353031154,2.14024590558481,2.02753862439029,0.917733760808408,2.34717403304412,1.96222640742402,0.659058548203415,1.94429899074283,1.81982348112971,2.87505128729943,0,0.725362142011344,0,2.05807548828758,1.43266719969378,1.03134418455488,5.05791152148994,1.5869729378161,5.07065122804943,1.69422266034566,0,0.449949858640699,1.97773272513395,0.7104801149461,0.599200221036809,1.15265491596466,3.11068836925433,4.45519596494579,3.99617426567626,3.42781181284564,2.42955395046775,5.26710436624302,4.79227355091182,8.27296907949019,2.20231761998777,3.31987079021488,1.22885226604995,5.80299666012853,6.67859798297591,2.6045668527838,2.51264699101243,2.25105044012672,2.13917546887534,3.24091444021034,4.41352210477219,5.40558392893372,1.59025005999687,1.73814588245607,3.76823835312181,0.860423876981386,3.39985666853875,1.07940638327563,0,2.68816132258401,2.38755514223978,1.70430322578058,1.81850203222008,1.7666978725517,6.05626705039726,5.13305909657271,0,21.3320010945999,1.94841936910093,1.77351905832569,1.51657333504435,5.59501010623394,1.03575153458869,2.3750742250372,4.3371331691534,3.34912026143355,2.7673859670727,2.56228488939458,5.05631440683531,1.25666591329675,1.97755974187499,1.44599356919912,4.42305275974937,2.10296904931632,1.10420759230197,2.42437626567611,5.59175283654366,6.44117753425404,25.3430515244281,3.32094171771169,3.23500836165985,4.79922184794726,1.90605340609597,2.24685959107234,4.11750542536764,7.79056983099759,4.17178368461463,5.8814555185976,3.32460871295296,4.05603157669394,4.27725328171328,1.8661045591514,2.0217820674694,2.31486041475121,7.41686524887411,4.82794419310293,3.96136685571768,4.67184935290717,7.89223390155403,6.40568601424249,5.05989312622536,5.17406741478031,6.25147179505242,5.67318240503458,6.33424046990216,4.82230611340665,4.17070873838397,4.179025998266,3.2925141825271,4.17971960318836,3.51106593656617,2.05878325691772,2.27330799516474,2.27838349789052,3.04883877975425,2.52086886045421,3.07768156260773,3.93528463494808,4.01094493507183,0.465067889500816,3.21928081679543,3.50296027101508,2.63295759861569,3.11918181750281,2.91847714365081,1.60819986167866,1.75640092232841,2.01309628140558,3.78521907415429,8.95270127699774,0.330418782983798,1.85115396664481,5.54549451391608,3.94802342162745,2.83508414908605,0.80673409849337,2.00140239460383,0.570676878337677,7.11793592316767,1.97638745668813,5.52937459360593,1.39269530428806,3.11942539390592,8.08937467788799,4.75503709724327,1.7922714592893,4.93136542478012,4.34144347916969,1.1270773567308,4.48032921259691,3.49114476901726,6.0316805105674,3.03535378196435,1.91893192373483,1.8839847340965,2.71473760627961,0.889357881261447,2.00214126859313,3.34150291692445,3.37293168577281,2.23146133527353,2.41177159752417,2.5462585178142,2.30156909960649,16.5377931310536,3.0201755450689,1.43768206527355,5.20997326735905,4.05648975048929,1.26289438973556,2.15276896226295,5.30687873499704,4.0645701836653,5.11626811780309,3.58522948172457,3.73439188705414,4.22442446919304,3.85264392116176,3.33261097240419,4.68320754858717,6.46304090835383,7.30833475840957,3.02964060449226,2.62181303545181,3.10832967358612,3.90552458170081,1.50791283939272,1.63171705145613,2.45882136509518,2.75936746304733,3.85321415970701,3.5163505977661,3.11476396215683,1.51482556322624,4.41711507182759,5.85658116444958,6.03185513651837,4.06246956519338,4.67877215573028,2.83076530788832,6.8817819284732,5.55286130031493,6.32460444714438,5.78378369559253,3.40656204499845,1.95872164033981,5.21238269931443,2.3095817216155,7.96470830039777,2.18502572539483,4.83717691143602,2.64047111658257,0.885905678642318,2.15204603560749,2.06742634534577,9.45187696641514,8.19943970284859,3.16036757935816,1.05418608574999,5.15677716240934,1.70219802876894,5.94201610303324,3.75140182969988,5.35842587578981,3.19212420556092,2.49716344642899,3.29098041204242,3.95804433848979,2.3467170806371,2.54198485036584,1.7642271844397,1.97863503529776,5.9741837877485,2.53314284698255,1.55184047204077,1.31312719796049,6.99554007911642,3.70850604021019,5.29699730473343,3.50857675537478,2.40752885580625,3.95573759709851,3.00727300986255,2.97411625168479,2.03974115992626,2.6590775941495,2.62579950228405,0,5.53587988766987,2.43983360552218,2.80813886136683,2.92723614420256,3.05707589244649,2.42755823492677,4.1326727862668,1.30877970992015,1.16653475962614,3.10669656543463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| |||
|short_description=p5@Ube2e3 | |||
}} |
Revision as of 12:55, 5 August 2015
Short description: | p5@Ube2e3 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ube2e3_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENSMUST00000138864_5end |
EntrezGene: | 22193 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.98e-10 | 64 |
neural plate | 4.98e-10 | 64 |
presumptive neural plate | 4.98e-10 | 64 |
ecto-epithelium | 1.08e-09 | 73 |
ectoderm-derived structure | 9.41e-09 | 95 |
ectoderm | 9.41e-09 | 95 |
presumptive ectoderm | 9.41e-09 | 95 |
central nervous system | 5.16e-08 | 73 |
structure with developmental contribution from neural crest | 6.39e-08 | 92 |
pre-chordal neural plate | 1.93e-07 | 49 |
nervous system | 2.42e-07 | 75 |