FFCP PHASE1:Hg19::chr7:7606153..7606181,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:7606153..7606181,- | |||
|id=chr7:7606153..7606181,- | |||
|ontology_enrichment_celltype=CL:1000497!8.44e-14!18;CL:0002518!8.44e-14!18;CL:1000507!1.35e-13!12;CL:1000494!1.35e-13!12;CL:1000449!1.79e-13!16;CL:0000066!4.39e-12!254;CL:0002681!2.43e-09!13;CL:0002584!2.43e-09!13;CL:0000223!2.80e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.50e-48;10!CL:1000494;3.50e-48;10!CL:1000497;2.46e-33;17!CL:0002518;2.46e-33;17!CL:1000449;1.82e-31;15!CL:0002681;1.85e-19;12!CL:0002584;1.85e-19;12!CL:0000239;9.41e-16;3!CL:1000615;9.41e-16;3!CL:0002306;9.41e-16;3!CL:0000650;8.56e-11;2!CL:1000500;8.56e-11;2!CL:1000618;8.56e-11;2!CL:1001318;8.56e-11;2!CL:0002173;8.56e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.70e-48,10;CL:1000494,3.70e-48,10;CL:1000497,2.51e-33,17;CL:0002518,2.51e-33,17;CL:1000449,1.89e-31,15;CL:0002681,1.96e-19,12;CL:0002584,1.96e-19,12;CL:0000239,1.01e-15,3;CL:1000615,1.01e-15,3;CL:0002306,1.01e-15,3;CL:0000650,8.78e-11,2;CL:1000500,8.78e-11,2;CL:1000618,8.78e-11,2;CL:1001318,8.78e-11,2;CL:0002173,8.78e-11,2;CL:0000066,1.22e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.32e-08;31 | |||
|ontology_enrichment_disease=DOID:305!1.02e-10!106;DOID:299!3.19e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.34e-10;25!DOID:4468;1.89e-10;2!DOID:3493;6.39e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.32e-10,25;DOID:4468,2.08e-10,2;DOID:3493,6.40e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000058!1.14e-16!26;UBERON:0000466!8.62e-15!126;UBERON:0006554!1.09e-14!44;UBERON:0006555!1.30e-14!17;UBERON:0005103!1.30e-14!17;UBERON:0000083!1.30e-14!17;UBERON:0009201!1.30e-14!17;UBERON:0004819!1.30e-14!17;UBERON:0006553!1.30e-14!17;UBERON:0003074!1.30e-14!17;UBERON:0003060!1.30e-14!17;UBERON:0005177!2.35e-14!107;UBERON:0002113!2.44e-14!27;UBERON:0003918!2.44e-14!27;UBERON:0005095!2.44e-14!27;UBERON:0007687!2.44e-14!27;UBERON:0001008!3.43e-14!45;UBERON:0009773!1.35e-13!12;UBERON:0001231!1.35e-13!12;UBERON:0004810!1.35e-13!12;UBERON:0000080!1.44e-13!18;UBERON:0002120!1.44e-13!18;UBERON:0004875!1.44e-13!18;UBERON:0005721!1.44e-13!18;UBERON:0005754!1.44e-13!18;UBERON:0007297!1.44e-13!18;UBERON:0004211!1.79e-13!16;UBERON:0001285!1.79e-13!16;UBERON:0007684!1.79e-13!16;UBERON:0003220!1.79e-13!16;UBERON:0004208!1.79e-13!16;UBERON:0005172!4.44e-13!55;UBERON:0005173!4.44e-13!55;UBERON:0000481!1.27e-12!347;UBERON:0003887!1.65e-12!21;UBERON:0000489!1.73e-12!32;UBERON:0003104!3.06e-12!238;UBERON:0009142!3.06e-12!238;UBERON:0004119!3.47e-12!169;UBERON:0000925!3.47e-12!169;UBERON:0006595!3.47e-12!169;UBERON:0009569!3.81e-12!113;UBERON:0004876!8.42e-12!20;UBERON:0000464!2.75e-11!104;UBERON:0004921!4.87e-11!129;UBERON:0004185!4.87e-11!129;UBERON:0002417!5.43e-11!61;UBERON:0000916!5.43e-11!61;UBERON:0001007!1.68e-10!155;UBERON:0001555!1.68e-10!155;UBERON:0007026!1.68e-10!155;UBERON:0005911!1.07e-09!82;UBERON:0002100!1.37e-09!216;UBERON:0003064!1.55e-09!37;UBERON:0001225!2.43e-09!13;UBERON:0008987!2.43e-09!13;UBERON:0003886!5.69e-09!63;UBERON:0007023!7.56e-09!115;UBERON:0000077!1.16e-08!130;UBERON:0002553!3.11e-08!70;UBERON:0000062!1.53e-07!511;UBERON:0001851!3.81e-07!16;UBERON:0005409!6.61e-07!35;UBERON:0000475!8.64e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.50e-48;10!UBERON:0009773;3.50e-48;10!UBERON:0001231;3.50e-48;10!UBERON:0004810;3.50e-48;10!UBERON:0002113;2.77e-32;24!UBERON:0011143;2.77e-32;24!UBERON:0006555;1.82e-31;15!UBERON:0004819;1.82e-31;15!UBERON:0001285;1.82e-31;15!UBERON:0007684;1.82e-31;15!UBERON:0000489;3.27e-26;29!UBERON:0006554;3.06e-25;30!UBERON:0001008;3.06e-25;30!UBERON:0001225;1.85e-19;12!UBERON:0008987;1.85e-19;12!UBERON:0006853;9.41e-16;3!UBERON:0007685;9.41e-16;3!UBERON:0004134;9.41e-16;3!UBERON:0001851;2.27e-15;15!UBERON:0000353;2.27e-15;15!UBERON:0005172;1.93e-12;52!UBERON:0005173;1.93e-12;52!UBERON:0005409;1.24e-11;22!UBERON:0002394;4.88e-11;4!UBERON:0003928;4.88e-11;4!UBERON:0003567;8.56e-11;2!UBERON:0003838;8.56e-11;2!UBERON:0003586;8.56e-11;2!UBERON:0005169;8.56e-11;2!UBERON:0002321;8.56e-11;2!UBERON:0005215;8.56e-11;2!UBERON:0002303;8.56e-11;2!UBERON:0002319;8.56e-11;2!UBERON:0002417;4.94e-09;58!UBERON:0000916;4.94e-09;58!UBERON:0000160;1.02e-08;17!UBERON:0002108;1.29e-08;4!UBERON:0004921;2.55e-08;33!UBERON:0005177;1.69e-07;99!UBERON:0002114;6.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.70e-48,10;UBERON:0004211,1.89e-31,15;UBERON:0009773,1.89e-31,15;UBERON:0001231,1.89e-31,15;UBERON:0001285,1.89e-31,15;UBERON:0007684,1.89e-31,15;UBERON:0004208,1.89e-31,15;UBERON:0002113,1.47e-29,26;UBERON:0003918,1.47e-29,26;UBERON:0011143,1.47e-29,26;UBERON:0005095,1.47e-29,26;UBERON:0007687,1.47e-29,26;UBERON:0006555,2.32e-29,16;UBERON:0004819,2.32e-29,16;UBERON:0000489,2.56e-24,31;UBERON:0001225,1.96e-19,12;UBERON:0008987,1.96e-19,12;UBERON:0006554,1.32e-17,47;UBERON:0001008,3.58e-17,48;UBERON:0005172,5.72e-17,54;UBERON:0005173,5.72e-17,54;UBERON:0006853,1.01e-15,3;UBERON:0007685,1.01e-15,3;UBERON:0004134,1.01e-15,3;UBERON:0001851,2.38e-15,15;UBERON:0000353,2.38e-15,15;UBERON:0002417,6.23e-15,60;UBERON:0000916,6.23e-15,60;UBERON:0005177,6.72e-13,101;UBERON:0003567,8.78e-11,2;UBERON:0003838,8.78e-11,2;UBERON:0003586,8.78e-11,2;UBERON:0005169,8.78e-11,2;UBERON:0002321,8.78e-11,2;UBERON:0005215,8.78e-11,2;UBERON:0002303,8.78e-11,2;UBERON:0002319,8.78e-11,2;UBERON:0003104,1.52e-10,160;UBERON:0009142,1.52e-10,160;UBERON:0005409,4.30e-10,25;UBERON:0009569,7.86e-10,112;UBERON:0003103,1.56e-09,68;UBERON:0002100,2.45e-09,199;UBERON:0000160,1.17e-08,17;UBERON:0002108,1.71e-08,4;UBERON:0002394,1.76e-07,6;UBERON:0003928,1.76e-07,6;UBERON:0004921,2.30e-07,118;UBERON:0003914,6.13e-07,117;UBERON:0002114,9.30e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,0.697801167972428,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.229240217243854,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,6.27241036569879,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,4.83437798366489,0.200506470303285,0,0,0,0,3.60959690325929,16.0962054548227,14.1182958451834,7.30696123266303,15.8327443339314,0,0,0.431831832204279,0,3.79325012561394,4.01351819083883,15.5474526557473,5.81753206250107,6.04461837749881,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,2.16530741786592,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24568648489864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,2.15684042753584,2.68531762013414,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.349839999984783,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,2.53197677433632,2.12202650606892,4.52329828588611,0,0.995261931078505,0.973033209536731,0,0,0,0,0.337005664903385,0.802577647298789,0,0,0,0,0.789168805698781,2.41981432097328,0,0,0,0,0,0,0,0,1.70765727617876,0,0.347119476670262,0,0.261177619741208,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.426905989478705,0,0.576361668616424,0,0.343189995723929,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0.337017719270924,0.0984274815147488,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0,0,15.6823357525404,3.09482069996489,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0.129282956361551,0,0.342173675768659,0,1.28144895081234,2.98688179689365,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.512483037175893,0,0,0.276516872303462,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0.376051641746286,0.20170506870352,26.5714763819251,0,0.163771917510097,1.33070477595341,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0.827356886187777,0,0.235479278551542,0,1.40136081656895,0,4.53447941559105,0,0.0714765441766563,0.47404083519818,0,0,0,0,1.7071847709395,0,0,0,0,0,0,0,0,0.447421727191169,1.47225350422864,1.34109717480496,1.94228651156368,1.53994210284371,0,0,0,0,0,0,0.879524133963433,0,1.389134845943,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0.722172300202514,2.19100916473955,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.250707539292375,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0.404112318087525,0.286888821570705,0,0,0,0,0.0898252021065869,0,0.488965776731466,0,0,0,0 | |||
|short_description=p@chr7:7606153..7606181,- | |||
}} |
Revision as of 15:39, 22 January 2014
Short description: | p@chr7:7606153..7606181, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:7606153..7606181, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.70e-48 | 10 |
nephron tubule epithelial cell | 3.70e-48 | 10 |
kidney cell | 2.51e-33 | 17 |
kidney epithelial cell | 2.51e-33 | 17 |
epithelial cell of nephron | 1.89e-31 | 15 |
kidney cortical cell | 1.96e-19 | 12 |
renal cortical epithelial cell | 1.96e-19 | 12 |
brush border epithelial cell | 1.01e-15 | 3 |
kidney cortex tubule cell | 1.01e-15 | 3 |
epithelial cell of proximal tubule | 1.01e-15 | 3 |
mesangial cell | 8.78e-11 | 2 |
kidney interstitial cell | 8.78e-11 | 2 |
juxtaglomerular complex cell | 8.78e-11 | 2 |
renal interstitial pericyte | 8.78e-11 | 2 |
extraglomerular mesangial cell | 8.78e-11 | 2 |
epithelial cell | 1.22e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.32e-10 | 25 |
clear cell adenocarcinoma | 2.08e-10 | 2 |
signet ring cell adenocarcinoma | 6.40e-10 | 2 |