FFCP PHASE1:Mm9::chr4:122758278..122758295,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=124|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:122758278..122758295,+|id=chr4:122758278..122758295,+|ontology_enrichment_celltype=CL:0002027!3.51e-07!3;CL:0002006!3.51e-07!3;CL:0002024!3.51e-07!3|ontology_enrichment_celltype_v019_2=CL:0002027,1.19e-23,3;CL:0002006,1.19e-23,3;CL:0002024,1.19e-23,3;CL:0000553,3.76e-12,6;CL:0000556,3.76e-12,6;CL:0002250,1.77e-10,3;CL:0000050,2.78e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.13e-12!59;UBERON:0000945!1.92e-09!16;UBERON:0010039!1.92e-09!16;UBERON:0004923!5.14e-09!24;UBERON:0003887!9.17e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.23e-20,6;UBERON:0004457,4.23e-20,6;UBERON:0000042,4.23e-20,6;UBERON:0004854,4.23e-20,6;UBERON:0009034,4.23e-20,6;UBERON:0002095,4.23e-20,6;UBERON:0004782,4.23e-20,6;UBERON:0003281,4.23e-20,6;UBERON:0009664,4.23e-20,6;UBERON:0002296,4.23e-20,6;UBERON:0005602,4.23e-20,6;UBERON:0001179,4.23e-20,6;UBERON:0006293,4.23e-20,6;UBERON:0003887,2.15e-18,10;UBERON:0004923,8.56e-11,24;UBERON:0002075,1.10e-09,19;UBERON:0000998,2.44e-08,1;UBERON:0007194,2.44e-08,1;UBERON:0006868,2.44e-08,1;UBERON:0002390,9.07e-08,45;UBERON:0003061,9.07e-08,45;UBERON:0000945,1.02e-07,16;UBERON:0010039,1.02e-07,16;UBERON:0002193,2.99e-07,48;UBERON:0002405,2.99e-07,48;UBERON:0002323,7.33e-07,37;UBERON:0004458,7.33e-07,37|phase1_expression=0,0,0,0,0,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,4.33042690360362,5.26435695213547,12.5921138063066,0,0,0,0.0850432901510698,0,0,0.47997726838022,0,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,1.73310971850765,1.66234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0,0.502670417600539,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.322928853391811,0.0603129249281559,0,0,0,0,2.39219233116994,0,0,2.63715839806567,3.55404992074665,2.97411625168479,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73260649706906,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr4:122758278..122758295,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:122758278..122758295,+ | |||
|description=CAGE_peak_at_chr4:122758278..122758295,+ | |||
|id=chr4:122758278..122758295,+ | |||
|ontology_enrichment_celltype=CL:0002027!3.51e-07!3;CL:0002006!3.51e-07!3;CL:0002024!3.51e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.19e-23,3;CL:0002006,1.19e-23,3;CL:0002024,1.19e-23,3;CL:0000553,3.76e-12,6;CL:0000556,3.76e-12,6;CL:0002250,1.77e-10,3;CL:0000050,2.78e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.13e-12!59;UBERON:0000945!1.92e-09!16;UBERON:0010039!1.92e-09!16;UBERON:0004923!5.14e-09!24;UBERON:0003887!9.17e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.23e-20,6;UBERON:0004457,4.23e-20,6;UBERON:0000042,4.23e-20,6;UBERON:0004854,4.23e-20,6;UBERON:0009034,4.23e-20,6;UBERON:0002095,4.23e-20,6;UBERON:0004782,4.23e-20,6;UBERON:0003281,4.23e-20,6;UBERON:0009664,4.23e-20,6;UBERON:0002296,4.23e-20,6;UBERON:0005602,4.23e-20,6;UBERON:0001179,4.23e-20,6;UBERON:0006293,4.23e-20,6;UBERON:0003887,2.15e-18,10;UBERON:0004923,8.56e-11,24;UBERON:0002075,1.10e-09,19;UBERON:0000998,2.44e-08,1;UBERON:0007194,2.44e-08,1;UBERON:0006868,2.44e-08,1;UBERON:0002390,9.07e-08,45;UBERON:0003061,9.07e-08,45;UBERON:0000945,1.02e-07,16;UBERON:0010039,1.02e-07,16;UBERON:0002193,2.99e-07,48;UBERON:0002405,2.99e-07,48;UBERON:0002323,7.33e-07,37;UBERON:0004458,7.33e-07,37 | |||
|phase1_expression=0,0,0,0,0,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,4.33042690360362,5.26435695213547,12.5921138063066,0,0,0,0.0850432901510698,0,0,0.47997726838022,0,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,1.73310971850765,1.66234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0,0.502670417600539,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.322928853391811,0.0603129249281559,0,0,0,0,2.39219233116994,0,0,2.63715839806567,3.55404992074665,2.97411625168479,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73260649706906,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr4:122758278..122758295,+ | |||
}} |
Latest revision as of 17:05, 4 August 2015
Short description: | p@chr4:122758278..122758295, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:122758278..122758295, + |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.19e-23 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.19e-23 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.19e-23 | 3 |
megakaryocyte progenitor cell | 3.76e-12 | 6 |
megakaryocyte | 3.76e-12 | 6 |
intestinal crypt stem cell | 1.77e-10 | 3 |
megakaryocyte-erythroid progenitor cell | 2.78e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.23e-20 | 6 |
cavity lining | 4.23e-20 | 6 |
serous membrane | 4.23e-20 | 6 |
gastrointestinal system mesentery | 4.23e-20 | 6 |
stomach region | 4.23e-20 | 6 |
mesentery | 4.23e-20 | 6 |
gastrointestinal system serosa | 4.23e-20 | 6 |
mesentery of stomach | 4.23e-20 | 6 |
gut mesentery | 4.23e-20 | 6 |
dorsal mesentery | 4.23e-20 | 6 |
dorsal mesogastrium | 4.23e-20 | 6 |
peritoneal cavity | 4.23e-20 | 6 |
spleen primordium | 4.23e-20 | 6 |
intraembryonic coelom | 2.15e-18 | 10 |
organ component layer | 8.56e-11 | 24 |
viscus | 1.10e-09 | 19 |
seminal vesicle | 2.44e-08 | 1 |
vesicular gland | 2.44e-08 | 1 |
seminal fluid secreting gland | 2.44e-08 | 1 |
hematopoietic system | 9.07e-08 | 45 |
blood island | 9.07e-08 | 45 |
stomach | 1.02e-07 | 16 |
food storage organ | 1.02e-07 | 16 |
hemolymphoid system | 2.99e-07 | 48 |
immune system | 2.99e-07 | 48 |
body cavity | 7.33e-07 | 37 |
body cavity or lining | 7.33e-07 | 37 |