FFCP PHASE1:Mm9::chr4:66488579..66488651,+: Difference between revisions
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{{FFCP|EntrezGene=21898|HGNC=|UniProt=Q9QUK6|association_with_transcript=0bp_to_ENSMUST00000048096,ENSMUST00000107365_5end|description=CAGE_peak_1_at_Tlr4_5end|id=chr4:66488579..66488651,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!7.03e-12!33;UBERON:0004535!8.04e-12!23;UBERON:0001009!8.04e-12!23;UBERON:0007100!1.18e-08!18;UBERON:0000948!1.18e-08!18;UBERON:0005498!1.18e-08!18;UBERON:0004140!1.18e-08!18;UBERON:0009881!1.18e-08!18;UBERON:0004141!1.18e-08!18;UBERON:0003084!1.18e-08!18;UBERON:0007005!1.18e-08!18;UBERON:0004139!1.18e-08!18;UBERON:0004291!1.18e-08!18;UBERON:0003103!2.23e-07!43;UBERON:0000914!2.61e-07!17;UBERON:0000926!6.43e-07!193;UBERON:0004120!6.43e-07!193;UBERON:0006603!6.43e-07!193;UBERON:0000383!7.91e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.86e-12,33;UBERON:0004535,5.57e-12,23;UBERON:0001009,5.57e-12,23;UBERON:0007100,9.16e-09,18;UBERON:0000948,9.16e-09,18;UBERON:0005498,9.16e-09,18;UBERON:0004140,9.16e-09,18;UBERON:0009881,9.16e-09,18;UBERON:0004141,9.16e-09,18;UBERON:0003084,9.16e-09,18;UBERON:0007005,9.16e-09,18;UBERON:0004139,9.16e-09,18;UBERON:0004291,9.16e-09,18;UBERON:0003103,4.18e-07,43;UBERON:0000383,6.54e-07,10|phase1_expression=3.20297694209588,3.83872948403297,0.909998478779072,0.90739263392049,0,0.503637815735669,0.467225281191051,0.258246646883153,0,0,0,0,0,0.0874204024189974,0,0.607425802169478,0,0.157731082679119,0.274228867211478,0.42438965179803,8.07911256435163,1.39007331681239,1.82839852397255,1.27993938234725,0.68822784320151,1.72269589234506,1.7230479846363,1.07735616342945,8.93110071444957,6.30075324399827,5.54326276638262,0,0,0,0,0.166234645358492,0,19.6709866446347,7.813353445238,21.4644735029257,31.1762688656438,21.1744100337118,20.3914348273085,59.4232980844725,57.3793430702452,36.3422569280129,6.25913075478431,3.2703773457067,2.19686182734472,5.05517737593137,5.5994568650145,0,0,0,0,41.1615097657515,40.9742819112422,33.5186859980338,0.202316460859598,0,0,3.38844532069132,4.4464739805557,2.6996991518442,0.988866362566974,1.4209602298922,0,0.768436610643109,0.207379224616955,0,0.420649922702764,0.571301968807607,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,1.68967186581868,0.263772575460388,0.0914876436024097,0.52091337055676,0.279182999001381,0,1.37518422999129,0.883885756421003,0.711858403995515,0.372798891650601,8.78423842664935,20.0264634282982,28.6965843814661,8.60423876981386,0,0,1.94932925234301,0.448026887097336,9.97155382935438,37.8355316123288,19.743736349818,19.7870161725791,4.08445917352373,38.4979432242953,7.64415719119937,7.11066703153331,12.7729714196616,12.1612735428047,9.60496445528088,7.76450382089608,9.58070169494535,5.64080128446334,1.56136794089522,3.95805121805784,4.38169444786511,5.12456977878917,9.40709657085639,5.02666365318702,20.0227923864843,37.4512334422571,8.84610551949874,10.8383789464764,9.93786833071771,7.75800405016355,7.45567044872489,2.34224637609238,0.83778682725382,3.32094171771169,0.838705871541442,0.599902730993408,0.762421362438388,2.09706895166752,0.915001205637253,0.628271760564322,1.56441888173049,0.511430914660661,0.62336413367868,1.29793010454206,7.94347038032467,12.9383249434497,6.06534620240819,9.6803253707778,0.910843100738926,0.689706313300419,0.180062129805349,3.31550599238573,4.21826294738233,4.22775276940004,3.93547243150861,8.53721123438752,0.215567992932842,0.567318240503458,0.879755620819744,2.6303487891309,3.89266148915837,3.83077383174383,7.81972118350185,1.39323986772945,0.702213187313235,0.51469581422943,1.70498099637356,4.97101854085205,8.67746421930056,7.02242039697958,6.8655973319711,10.0349758191176,11.415766353666,14.1845706297749,10.9992094573844,23.9368951852697,16.6205448412615,33.3259952080563,29.1037026269622,22.0761981012252,40.1776710982623,37.0409715778626,1.26173969138476,1.13195073617213,1.65209391491899,1.58670339998127,0.213288250535234,1.39342003116263,1.28867461322093,1.00841762311671,1.55664630691409,3.23383564391351,1.42358718463353,3.45867804920423,5.27803938480566,8.55512829776949,4.09424582950152,0.898819408654221,7.13255564586491,11.5501938487533,0.758671603812327,2.39921876480431,1.1270773567308,4.48032921259691,4.46090720485539,6.59276706968994,9.86489979138414,8.26616828685772,12.4028994994686,8.88459580236964,2.07516838961004,0.83422552858047,0.786235980452812,1.57403478669398,1.42002084971952,1.20588579876208,2.29163266603278,2.30156909960649,2.43202840162553,3.0201755450689,2.87536413054709,3.34926852901653,3.43241440426017,3.53610429125956,2.51156378930677,5.30687873499704,23.2789019609922,0.568474235311454,0.977789858652155,1.86719594352707,1.40814148973101,3.85264392116176,9.99783291721258,8.58588050574315,13.24135210492,14.1737401375216,13.2347457985714,22.4492741160561,20.5495128420416,24.0117437245309,7.53956419696361,1.08781136763742,32.9482062922754,20.9711927191597,2.40825884981688,1.40654023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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21898 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QUK6 | |||
|association_with_transcript=0bp_to_ENSMUST00000048096,ENSMUST00000107365_5end | |||
|cluster_id=chr4:66488579..66488651,+ | |||
|description=CAGE_peak_1_at_Tlr4_5end | |||
|id=chr4:66488579..66488651,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.03e-12!33;UBERON:0004535!8.04e-12!23;UBERON:0001009!8.04e-12!23;UBERON:0007100!1.18e-08!18;UBERON:0000948!1.18e-08!18;UBERON:0005498!1.18e-08!18;UBERON:0004140!1.18e-08!18;UBERON:0009881!1.18e-08!18;UBERON:0004141!1.18e-08!18;UBERON:0003084!1.18e-08!18;UBERON:0007005!1.18e-08!18;UBERON:0004139!1.18e-08!18;UBERON:0004291!1.18e-08!18;UBERON:0003103!2.23e-07!43;UBERON:0000914!2.61e-07!17;UBERON:0000926!6.43e-07!193;UBERON:0004120!6.43e-07!193;UBERON:0006603!6.43e-07!193;UBERON:0000383!7.91e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.86e-12,33;UBERON:0004535,5.57e-12,23;UBERON:0001009,5.57e-12,23;UBERON:0007100,9.16e-09,18;UBERON:0000948,9.16e-09,18;UBERON:0005498,9.16e-09,18;UBERON:0004140,9.16e-09,18;UBERON:0009881,9.16e-09,18;UBERON:0004141,9.16e-09,18;UBERON:0003084,9.16e-09,18;UBERON:0007005,9.16e-09,18;UBERON:0004139,9.16e-09,18;UBERON:0004291,9.16e-09,18;UBERON:0003103,4.18e-07,43;UBERON:0000383,6.54e-07,10 | |||
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| |||
|short_description=p1@Tlr4 | |||
}} |
Revision as of 17:04, 5 August 2015
Short description: | p1@Tlr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tlr4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000048096, ENSMUST00000107365_5end |
EntrezGene: | 21898 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 4.86e-12 | 33 |
cardiovascular system | 5.57e-12 | 23 |
circulatory system | 5.57e-12 | 23 |
primary circulatory organ | 9.16e-09 | 18 |
heart | 9.16e-09 | 18 |
primitive heart tube | 9.16e-09 | 18 |
primary heart field | 9.16e-09 | 18 |
anterior lateral plate mesoderm | 9.16e-09 | 18 |
heart tube | 9.16e-09 | 18 |
heart primordium | 9.16e-09 | 18 |
cardiac mesoderm | 9.16e-09 | 18 |
cardiogenic plate | 9.16e-09 | 18 |
heart rudiment | 9.16e-09 | 18 |
compound organ | 4.18e-07 | 43 |
musculature of body | 6.54e-07 | 10 |