FFCP PHASE1:Hg19::chr8:63951755..63951773,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8836 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4248 | |||
|TSSclassifier=strong | |||
|UniProt=Q92820 | |||
|association_with_transcript=-25bp_to_ENST00000260118_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_GGH_5end | |||
|id=chr8:63951755..63951773,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10!UBERON:0004161;6.54e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;9.48e-18;1!DOID:1357;9.48e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.70e-17,1;DOID:1357,1.70e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!6.63e-09!34;UBERON:0003528!6.63e-09!34;UBERON:0001893!1.97e-08!34;UBERON:0001869!2.18e-08!32;UBERON:0001049!3.50e-08!57;UBERON:0005068!3.50e-08!57;UBERON:0006241!3.50e-08!57;UBERON:0007135!3.50e-08!57;UBERON:0002791!5.67e-08!33;UBERON:0005743!6.62e-08!86;UBERON:0000073!9.02e-08!94;UBERON:0001016!9.02e-08!94;UBERON:0001017!1.51e-07!82;UBERON:0000349!5.85e-07!5;UBERON:0002616!7.70e-07!59;UBERON:0002780!7.72e-07!41;UBERON:0001890!7.72e-07!41;UBERON:0006240!7.72e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;9.48e-18;1!UBERON:0001825;9.48e-18;1!UBERON:0001875;1.51e-09;2!UBERON:0006514;1.51e-09;2!UBERON:0000473;1.99e-09;8!UBERON:0002107;2.11e-08;19!UBERON:0006925;2.11e-08;19!UBERON:0003135;4.30e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.70e-17,1;UBERON:0001825,1.70e-17,1;UBERON:0001875,1.33e-09,2;UBERON:0006514,1.33e-09,2;UBERON:0000473,1.99e-09,8;UBERON:0002107,1.98e-08,19;UBERON:0006925,1.98e-08,19;UBERON:0008836,1.98e-08,19;UBERON:0008835,2.36e-07,22;UBERON:0003894,2.36e-07,22;UBERON:0003135,4.30e-07,11;UBERON:0009854,4.68e-07,23 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.376627918784408,0.152826811495903,0,0.314843125254717,0,0,0,0,0.30120591877825,0,0.154934401160603,0.142169232487422,0.293600439334847,0,0,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0.949387162322653,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,2.81605012320082,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0.482022059766964,0.330881918197182,0,0,0.404493924480493,0,0,0,0,0.4115740113314,0,0,1.96565443335525,0,0,0.491953754172454,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0.253991577168676,0,0,0,0.205654985406647,0,0,0,0,0.1466765716419,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0.560425719967636,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.422008249231538,0.111308705022906,0,0,0,0,0.251932747854276,1.1249555075237,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0,0,0,0.41827123283581,0,0.227884111694002,0.23056390438806,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0.282706142867882,0,0,0.0884575645033392,0,0.296521128680622,0.494255755786011,0.730953646538188,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,2.51980511565014,0,0,0,0,0,0.104602846312333,0,0,1.20084057741958,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0.223171457441873,0,0,1.16495949527454,0.236349546921671,0.329663433524666,0.0674035438541849,0,0,0.795229689809303,0.681017030557878,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,0.335434687599266,0.236417121897595,0.0524545881349981,0,0.35857467866569,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0.082092520749339,0,0.113312091520126,1.17241786942466,0,0.258565912723101,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,1.09937867375164,0,0,0.1251909307065,0,0.443716206147409,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0.214821114084977,0,0,0.800055529326307,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0.176689145945881,0,0,0.512483037175893,0.345430341731199,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0.255788742607303,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.207471757392654,0.322951291263702,0,0,0.471878893390961,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0.135075169236789,0.781078098613847,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.40781839786099,0.0657727735628491,0.236387681767936,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0.647428837187895,0,0,0,1.16969731731053,0.397901550322736,0,1.92008339466232,0,0,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0,0,0.305966489225945,0.26721740526556,0.18378979906969,0.250707539292375,4.77405798774908,8.84281629515389,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@GGH | |||
}} |
Revision as of 22:17, 22 January 2014
Short description: | p5@GGH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GGH_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -25bp_to_ENST00000260118_5end |
EntrezGene: | GGH |
HGNC: | 4248 |
UniProt: | Q92820 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.70e-17 | 1 |
paranasal sinus | 1.70e-17 | 1 |
globus pallidus | 1.33e-09 | 2 |
pallidum | 1.33e-09 | 2 |
testis | 1.99e-09 | 8 |
liver | 1.98e-08 | 19 |
digestive gland | 1.98e-08 | 19 |
liver bud | 1.98e-08 | 19 |
hepatic diverticulum | 2.36e-07 | 22 |
liver primordium | 2.36e-07 | 22 |
male reproductive organ | 4.30e-07 | 11 |
digestive tract diverticulum | 4.68e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.70e-17 | 1 |
maxillary sinus cancer | 1.70e-17 | 1 |