FFCP PHASE1:Hg19::chr8:6783588..6783605,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2765 | |||
|TSSclassifier=not | |||
|UniProt=Q01524,Q6EZF9 | |||
|association_with_transcript=0bp_to_ENST00000297436,NM_001926,uc003wqt.2_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_DEFA6_5end | |||
|id=chr8:6783588..6783605,- | |||
|ontology_enrichment_celltype=CL:0002322!1.37e-11!5;CL:0002563!4.20e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.79e-17!27;UBERON:0005409!3.11e-16!35;UBERON:0000059!1.92e-14!11;UBERON:0001155!1.15e-11!9;UBERON:0001007!1.70e-09!155;UBERON:0001555!1.70e-09!155;UBERON:0007026!1.70e-09!155;UBERON:0004921!2.76e-09!129;UBERON:0004185!2.76e-09!129;UBERON:0004119!2.04e-08!169;UBERON:0000925!2.04e-08!169;UBERON:0006595!2.04e-08!169;UBERON:0001831!1.39e-07!1;UBERON:0001567!1.39e-07!1;UBERON:0008801!1.39e-07!1;UBERON:0002146!2.47e-07!1;UBERON:0005623!2.47e-07!1;UBERON:0002336!2.98e-07!1;UBERON:0001018!2.98e-07!1;UBERON:0002473!2.98e-07!1;UBERON:0005340!2.98e-07!1;UBERON:0002316!2.98e-07!1;UBERON:0003544!2.98e-07!1;UBERON:0001020!2.98e-07!1;UBERON:0005970!2.98e-07!1;UBERON:0002437!2.98e-07!1;UBERON:0002370!3.38e-07!4;UBERON:0005058!3.38e-07!4;UBERON:0009113!3.38e-07!4;UBERON:0003295!3.38e-07!4;UBERON:0005562!3.38e-07!4;UBERON:0001242!4.20e-07!4;UBERON:0001262!4.20e-07!4;UBERON:0004786!4.20e-07!4;UBERON:0004808!4.20e-07!4;UBERON:0001277!4.20e-07!4;UBERON:0001052!4.61e-07!4;UBERON:0008814!6.67e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.68e-36;22!UBERON:0000160;8.85e-36;17!UBERON:0002108;6.81e-25;4!UBERON:0004921;4.38e-22;33!UBERON:0001155;4.73e-14;9!UBERON:0000059;1.32e-11;11!UBERON:0000922;5.61e-09;49!UBERON:0001555;5.71e-09;54!UBERON:0002370;8.32e-08;2!UBERON:0005058;8.32e-08;2!UBERON:0009113;8.32e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.62e-36,17;UBERON:0005409,4.72e-32,25;UBERON:0002108,6.81e-25,4;UBERON:0001155,4.73e-14,9;UBERON:0000059,1.32e-11,11;UBERON:0004921,5.00e-10,118;UBERON:0001007,1.04e-09,145;UBERON:0001555,1.04e-09,145;UBERON:0007026,1.04e-09,145;UBERON:0004119,1.12e-08,160;UBERON:0000925,1.12e-08,160;UBERON:0006595,1.12e-08,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,43.7915249674542,2294.50076565211,16.4978139132079,0,0,0,0.134802265961354,0,0,0,0,0,0,519.050171848768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,228.793391435573,0,0,0,0,2627.31703862687,26.2271472604749,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3370641531769,0,0,0,0,0,450.201841278606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,1.0334225573761,0.496597714366863,0,0,1.61693751166575,0.870866991587845,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@DEFA6 | |||
}} |
Revision as of 20:33, 22 January 2014
Short description: | p1@DEFA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DEFA6_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000297436, NM_001926, uc003wqt.2_5end |
EntrezGene: | DEFA6 |
HGNC: | 2765 |
UniProt: | Q01524Q6EZF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 8.62e-36 | 17 |
gastrointestinal system | 4.72e-32 | 25 |
small intestine | 6.81e-25 | 4 |
colon | 4.73e-14 | 9 |
large intestine | 1.32e-11 | 11 |
subdivision of digestive tract | 5.00e-10 | 118 |
digestive system | 1.04e-09 | 145 |
digestive tract | 1.04e-09 | 145 |
primitive gut | 1.04e-09 | 145 |
endoderm-derived structure | 1.12e-08 | 160 |
endoderm | 1.12e-08 | 160 |
presumptive endoderm | 1.12e-08 | 160 |