FFCP PHASE1:Mm9::chr5:121144599..121144612,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=898|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:121144599..121144612,-|id=chr5:121144599..121144612,-|ontology_enrichment_celltype=CL:0000553!9.42e-09!6;CL:0000556!9.42e-09!6|ontology_enrichment_celltype_v019_2=CL:0000553,2.70e-21,6;CL:0000556,2.70e-21,6;CL:0000050,3.44e-14,9;CL:0000839,8.49e-10,13;CL:0002031,1.28e-09,25;CL:0000763,6.16e-08,16;CL:0002027,1.63e-07,3;CL:0002006,1.63e-07,3;CL:0002024,1.63e-07,3;CL:0000988,2.31e-07,32;CL:0002032,2.31e-07,32;CL:0000037,2.31e-07,32;CL:0000837,2.31e-07,32;CL:0000625,7.38e-07,1;CL:0000945,9.48e-07,1;CL:0000236,9.48e-07,1;CL:0000826,9.48e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.00e-20!48;UBERON:0002390!5.00e-18!45;UBERON:0003061!5.00e-18!45;UBERON:0004177!6.76e-18!29;UBERON:0002370!5.36e-14!23;UBERON:0000974!5.36e-14!23;UBERON:0004807!5.36e-14!23;UBERON:0005058!5.36e-14!23;UBERON:0003351!5.36e-14!23;UBERON:0009113!5.36e-14!23;UBERON:0003295!5.36e-14!23;UBERON:0009722!5.36e-14!23;UBERON:0005562!5.36e-14!23;UBERON:0007690!5.36e-14!23;UBERON:0006562!2.91e-13!24;UBERON:0003408!2.91e-13!24;UBERON:0001557!2.91e-13!24;UBERON:0001042!2.91e-13!24;UBERON:0008814!2.91e-13!24;UBERON:0009145!2.91e-13!24;UBERON:0000063!3.31e-12!35;UBERON:0002405!1.42e-11!70;UBERON:0000072!2.17e-11!27;UBERON:0000065!1.33e-09!41;UBERON:0001004!2.85e-09!42;UBERON:0003081!1.06e-08!88;UBERON:0005057!3.69e-08!51;UBERON:0000064!1.70e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.09e-19,48;UBERON:0002405,2.09e-19,48;UBERON:0002390,6.96e-18,45;UBERON:0003061,6.96e-18,45;UBERON:0002370,7.09e-14,23;UBERON:0000974,7.09e-14,23;UBERON:0004807,7.09e-14,23;UBERON:0005058,7.09e-14,23;UBERON:0003351,7.09e-14,23;UBERON:0009113,7.09e-14,23;UBERON:0003295,7.09e-14,23;UBERON:0009722,7.09e-14,23;UBERON:0005562,7.09e-14,23;UBERON:0007690,7.09e-14,23;UBERON:0006562,2.92e-13,24;UBERON:0003408,2.92e-13,24;UBERON:0001557,2.92e-13,24;UBERON:0001042,2.92e-13,24;UBERON:0008814,2.92e-13,24;UBERON:0009145,2.92e-13,24;UBERON:0000072,1.10e-11,27;UBERON:0004177,8.14e-11,29;UBERON:0005057,8.14e-11,29;UBERON:0000077,8.43e-09,35;UBERON:0007811,1.57e-08,36;UBERON:0003081,2.36e-08,87;UBERON:0002371,6.16e-08,16;UBERON:0000065,2.26e-07,41;UBERON:0001004,3.57e-07,42;UBERON:0000153,5.52e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,1.33243904726265,1.21485160433896,0,2.99689057090326,2.74228867211478,2.12194825899015,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,0,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0.188368457004691,0.956859594047176,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,2.22997736819181,4.10843828659309,4.80707045017842,5.37080087002444,3.17890167650024,2.16351809135944,1.62458479892035,1.00966449948148,0.381034033274999,0.403304740547362,0.194915761479505,0.384847366561318,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr5:121144599..121144612,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=898 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:121144599..121144612,- | |||
|description=CAGE_peak_at_chr5:121144599..121144612,- | |||
|id=chr5:121144599..121144612,- | |||
|ontology_enrichment_celltype=CL:0000553!9.42e-09!6;CL:0000556!9.42e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.70e-21,6;CL:0000556,2.70e-21,6;CL:0000050,3.44e-14,9;CL:0000839,8.49e-10,13;CL:0002031,1.28e-09,25;CL:0000763,6.16e-08,16;CL:0002027,1.63e-07,3;CL:0002006,1.63e-07,3;CL:0002024,1.63e-07,3;CL:0000988,2.31e-07,32;CL:0002032,2.31e-07,32;CL:0000037,2.31e-07,32;CL:0000837,2.31e-07,32;CL:0000625,7.38e-07,1;CL:0000945,9.48e-07,1;CL:0000236,9.48e-07,1;CL:0000826,9.48e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.00e-20!48;UBERON:0002390!5.00e-18!45;UBERON:0003061!5.00e-18!45;UBERON:0004177!6.76e-18!29;UBERON:0002370!5.36e-14!23;UBERON:0000974!5.36e-14!23;UBERON:0004807!5.36e-14!23;UBERON:0005058!5.36e-14!23;UBERON:0003351!5.36e-14!23;UBERON:0009113!5.36e-14!23;UBERON:0003295!5.36e-14!23;UBERON:0009722!5.36e-14!23;UBERON:0005562!5.36e-14!23;UBERON:0007690!5.36e-14!23;UBERON:0006562!2.91e-13!24;UBERON:0003408!2.91e-13!24;UBERON:0001557!2.91e-13!24;UBERON:0001042!2.91e-13!24;UBERON:0008814!2.91e-13!24;UBERON:0009145!2.91e-13!24;UBERON:0000063!3.31e-12!35;UBERON:0002405!1.42e-11!70;UBERON:0000072!2.17e-11!27;UBERON:0000065!1.33e-09!41;UBERON:0001004!2.85e-09!42;UBERON:0003081!1.06e-08!88;UBERON:0005057!3.69e-08!51;UBERON:0000064!1.70e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.09e-19,48;UBERON:0002405,2.09e-19,48;UBERON:0002390,6.96e-18,45;UBERON:0003061,6.96e-18,45;UBERON:0002370,7.09e-14,23;UBERON:0000974,7.09e-14,23;UBERON:0004807,7.09e-14,23;UBERON:0005058,7.09e-14,23;UBERON:0003351,7.09e-14,23;UBERON:0009113,7.09e-14,23;UBERON:0003295,7.09e-14,23;UBERON:0009722,7.09e-14,23;UBERON:0005562,7.09e-14,23;UBERON:0007690,7.09e-14,23;UBERON:0006562,2.92e-13,24;UBERON:0003408,2.92e-13,24;UBERON:0001557,2.92e-13,24;UBERON:0001042,2.92e-13,24;UBERON:0008814,2.92e-13,24;UBERON:0009145,2.92e-13,24;UBERON:0000072,1.10e-11,27;UBERON:0004177,8.14e-11,29;UBERON:0005057,8.14e-11,29;UBERON:0000077,8.43e-09,35;UBERON:0007811,1.57e-08,36;UBERON:0003081,2.36e-08,87;UBERON:0002371,6.16e-08,16;UBERON:0000065,2.26e-07,41;UBERON:0001004,3.57e-07,42;UBERON:0000153,5.52e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,1.33243904726265,1.21485160433896,0,2.99689057090326,2.74228867211478,2.12194825899015,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,0,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0.188368457004691,0.956859594047176,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,2.22997736819181,4.10843828659309,4.80707045017842,5.37080087002444,3.17890167650024,2.16351809135944,1.62458479892035,1.00966449948148,0.381034033274999,0.403304740547362,0.194915761479505,0.384847366561318,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:121144599..121144612,- | |||
}} |
Latest revision as of 04:36, 6 August 2015
Short description: | p@chr5:121144599..121144612, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:121144599..121144612, - |
Coexpression cluster: | MCL_coexpression_mm9:898 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.70e-21 | 6 |
megakaryocyte | 2.70e-21 | 6 |
megakaryocyte-erythroid progenitor cell | 3.44e-14 | 9 |
myeloid lineage restricted progenitor cell | 8.49e-10 | 13 |
hematopoietic lineage restricted progenitor cell | 1.28e-09 | 25 |
myeloid cell | 6.16e-08 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.63e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.63e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.63e-07 | 3 |
hematopoietic cell | 2.31e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.31e-07 | 32 |
hematopoietic stem cell | 2.31e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.31e-07 | 32 |
CD8-positive, alpha-beta T cell | 7.38e-07 | 1 |
lymphocyte of B lineage | 9.48e-07 | 1 |
B cell | 9.48e-07 | 1 |
pro-B cell | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.09e-19 | 48 |
immune system | 2.09e-19 | 48 |
hematopoietic system | 6.96e-18 | 45 |
blood island | 6.96e-18 | 45 |
thymus | 7.09e-14 | 23 |
neck | 7.09e-14 | 23 |
respiratory system epithelium | 7.09e-14 | 23 |
hemolymphoid system gland | 7.09e-14 | 23 |
pharyngeal epithelium | 7.09e-14 | 23 |
thymic region | 7.09e-14 | 23 |
pharyngeal gland | 7.09e-14 | 23 |
entire pharyngeal arch endoderm | 7.09e-14 | 23 |
thymus primordium | 7.09e-14 | 23 |
early pharyngeal endoderm | 7.09e-14 | 23 |
pharynx | 2.92e-13 | 24 |
gland of gut | 2.92e-13 | 24 |
upper respiratory tract | 2.92e-13 | 24 |
chordate pharynx | 2.92e-13 | 24 |
pharyngeal arch system | 2.92e-13 | 24 |
pharyngeal region of foregut | 2.92e-13 | 24 |
segment of respiratory tract | 1.10e-11 | 27 |
hemopoietic organ | 8.14e-11 | 29 |
immune organ | 8.14e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 8.43e-09 | 35 |
craniocervical region | 1.57e-08 | 36 |
lateral plate mesoderm | 2.36e-08 | 87 |
bone marrow | 6.16e-08 | 16 |
respiratory tract | 2.26e-07 | 41 |
respiratory system | 3.57e-07 | 42 |
anterior region of body | 5.52e-07 | 43 |